Experiment: L-Lysine 60 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_24745 and PS417_24750 are separated by 174 nucleotides PS417_24750 and PS417_24755 are separated by 145 nucleotides
PS417_24745: PS417_24745 - gamma-glutamyl phosphate reductase, at 5,367,807 to 5,369,072
_24745
PS417_24750: PS417_24750 - 3-methyladenine DNA glycosylase, at 5,369,247 to 5,369,930
_24750
PS417_24755: PS417_24755 - phosphoesterase, at 5,370,076 to 5,371,392
_24755
Position (kb) 5369
5370 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5368.370 kb on - strand, within PS417_24745 at 5368.370 kb on - strand, within PS417_24745 at 5368.370 kb on - strand, within PS417_24745 at 5368.501 kb on - strand, within PS417_24745 at 5369.110 kb on - strand at 5369.110 kb on - strand at 5369.110 kb on - strand at 5369.112 kb on - strand at 5369.112 kb on - strand at 5369.112 kb on - strand at 5369.112 kb on - strand at 5369.112 kb on - strand at 5369.168 kb on - strand at 5369.193 kb on - strand at 5369.208 kb on - strand at 5369.224 kb on + strand at 5369.225 kb on - strand at 5369.403 kb on + strand, within PS417_24750 at 5369.407 kb on - strand, within PS417_24750 at 5369.407 kb on - strand, within PS417_24750 at 5369.443 kb on - strand, within PS417_24750 at 5369.483 kb on + strand, within PS417_24750 at 5369.484 kb on - strand, within PS417_24750 at 5369.484 kb on - strand, within PS417_24750 at 5369.487 kb on + strand, within PS417_24750 at 5369.487 kb on + strand, within PS417_24750 at 5369.487 kb on + strand, within PS417_24750 at 5369.487 kb on + strand, within PS417_24750 at 5369.488 kb on - strand, within PS417_24750 at 5369.488 kb on - strand, within PS417_24750 at 5369.488 kb on - strand, within PS417_24750 at 5369.488 kb on - strand, within PS417_24750 at 5369.488 kb on - strand, within PS417_24750 at 5369.488 kb on - strand, within PS417_24750 at 5369.488 kb on - strand, within PS417_24750 at 5369.488 kb on - strand, within PS417_24750 at 5369.493 kb on + strand, within PS417_24750 at 5369.494 kb on - strand, within PS417_24750 at 5369.494 kb on - strand, within PS417_24750 at 5369.494 kb on - strand, within PS417_24750 at 5369.494 kb on - strand, within PS417_24750 at 5369.496 kb on + strand, within PS417_24750 at 5369.497 kb on - strand, within PS417_24750 at 5369.751 kb on + strand, within PS417_24750 at 5369.751 kb on + strand, within PS417_24750 at 5369.752 kb on - strand, within PS417_24750 at 5369.752 kb on - strand, within PS417_24750 at 5369.932 kb on - strand at 5369.935 kb on + strand at 5369.935 kb on + strand at 5369.936 kb on - strand at 5369.936 kb on - strand at 5369.936 kb on - strand at 5369.936 kb on - strand at 5369.936 kb on - strand at 5370.076 kb on - strand at 5370.076 kb on - strand at 5370.307 kb on + strand, within PS417_24755 at 5370.307 kb on + strand, within PS417_24755 at 5370.307 kb on + strand, within PS417_24755 at 5370.308 kb on - strand, within PS417_24755 at 5370.308 kb on - strand, within PS417_24755 at 5370.395 kb on - strand, within PS417_24755 at 5370.395 kb on - strand, within PS417_24755 at 5370.406 kb on + strand, within PS417_24755 at 5370.407 kb on - strand, within PS417_24755 at 5370.456 kb on + strand, within PS417_24755 at 5370.547 kb on + strand, within PS417_24755 at 5370.548 kb on - strand, within PS417_24755 at 5370.698 kb on + strand, within PS417_24755 at 5370.741 kb on + strand, within PS417_24755 at 5370.899 kb on + strand, within PS417_24755 at 5370.900 kb on - strand, within PS417_24755
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine 60 mM remove 5,368,370 - PS417_24745 0.44 -0.5 5,368,370 - PS417_24745 0.44 -1.5 5,368,370 - PS417_24745 0.44 -1.7 5,368,501 - PS417_24745 0.55 -1.1 5,369,110 - -1.2 5,369,110 - +1.5 5,369,110 - -0.4 5,369,112 - -0.2 5,369,112 - -0.3 5,369,112 - -0.6 5,369,112 - +0.1 5,369,112 - -0.4 5,369,168 - +0.1 5,369,193 - -0.2 5,369,208 - -0.2 5,369,224 + -0.3 5,369,225 - -0.2 5,369,403 + PS417_24750 0.23 +1.1 5,369,407 - PS417_24750 0.23 -0.2 5,369,407 - PS417_24750 0.23 +0.6 5,369,443 - PS417_24750 0.29 +0.6 5,369,483 + PS417_24750 0.35 -0.1 5,369,484 - PS417_24750 0.35 -0.3 5,369,484 - PS417_24750 0.35 -0.3 5,369,487 + PS417_24750 0.35 +0.1 5,369,487 + PS417_24750 0.35 +0.7 5,369,487 + PS417_24750 0.35 +0.5 5,369,487 + PS417_24750 0.35 -0.1 5,369,488 - PS417_24750 0.35 -0.3 5,369,488 - PS417_24750 0.35 +0.0 5,369,488 - PS417_24750 0.35 -0.1 5,369,488 - PS417_24750 0.35 -0.6 5,369,488 - PS417_24750 0.35 +0.1 5,369,488 - PS417_24750 0.35 -0.2 5,369,488 - PS417_24750 0.35 +0.1 5,369,488 - PS417_24750 0.35 +1.1 5,369,493 + PS417_24750 0.36 +0.1 5,369,494 - PS417_24750 0.36 +0.2 5,369,494 - PS417_24750 0.36 -1.1 5,369,494 - PS417_24750 0.36 +1.2 5,369,494 - PS417_24750 0.36 -0.1 5,369,496 + PS417_24750 0.36 +1.1 5,369,497 - PS417_24750 0.37 -1.0 5,369,751 + PS417_24750 0.74 -0.5 5,369,751 + PS417_24750 0.74 -0.2 5,369,752 - PS417_24750 0.74 -0.1 5,369,752 - PS417_24750 0.74 +0.6 5,369,932 - -0.5 5,369,935 + +0.5 5,369,935 + +0.4 5,369,936 - +0.4 5,369,936 - +0.7 5,369,936 - -0.5 5,369,936 - -0.0 5,369,936 - -0.4 5,370,076 - +0.3 5,370,076 - -0.5 5,370,307 + PS417_24755 0.18 +1.3 5,370,307 + PS417_24755 0.18 -1.2 5,370,307 + PS417_24755 0.18 -0.9 5,370,308 - PS417_24755 0.18 -1.7 5,370,308 - PS417_24755 0.18 -1.5 5,370,395 - PS417_24755 0.24 -1.4 5,370,395 - PS417_24755 0.24 +2.3 5,370,406 + PS417_24755 0.25 -2.2 5,370,407 - PS417_24755 0.25 -1.2 5,370,456 + PS417_24755 0.29 -1.6 5,370,547 + PS417_24755 0.36 +0.1 5,370,548 - PS417_24755 0.36 +2.1 5,370,698 + PS417_24755 0.47 -0.7 5,370,741 + PS417_24755 0.50 -2.0 5,370,899 + PS417_24755 0.62 +0.0 5,370,900 - PS417_24755 0.63 -1.6
Or see this region's nucleotide sequence