Strain Fitness in Escherichia coli BW25113 around b4295

Experiment: 2,4-Dinitrophenol 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2,4-Dinitrophenol 2 mM
4,516,377	+				-0.4
4,516,417	+				-0.5
4,516,430	+				-0.5
4,516,456	+				-0.7
4,516,515	+				+0.0
4,516,515	+				-0.5
4,516,686	-	insA-7	b4294	0.49	-0.2
4,516,686	-	insA-7	b4294	0.49	+0.2
4,516,884	+	insB-7	b4576	0.28	-0.4
4,516,946	+	insB-7	b4576	0.40	-0.0
4,516,959	-	insB-7	b4576	0.43	+0.1
4,516,983	+	insB-7	b4576	0.47	-0.2
4,516,983	+	insB-7	b4576	0.47	-0.2
4,517,038	-	insB-7	b4576	0.58	-0.2
4,517,038	-	insB-7	b4576	0.58	+0.1
4,517,064	-	insB-7	b4576	0.63	+0.3
4,517,088	+	insB-7	b4576	0.68	-0.0
4,517,100	+	insB-7	b4576	0.71	+0.9
4,517,108	-	insB-7	b4576	0.72	+0.2
4,517,146	+	insB-7	b4576	0.80	+0.3
4,517,146	+	insB-7	b4576	0.80	-0.7
4,517,333	+				-0.4
4,517,341	-				+0.7
4,517,341	-				+0.4
4,517,341	-				-0.3
4,517,341	-				+0.8
4,517,377	-				-0.9
4,517,434	+				+0.1
4,517,439	-				-1.1
4,517,539	-	yjhU	b4295	0.18	-0.4
4,517,710	-	yjhU	b4295	0.35	-1.4
4,517,710	-	yjhU	b4295	0.35	+0.2
4,517,738	+	yjhU	b4295	0.38	+0.1
4,517,750	+	yjhU	b4295	0.39	-0.0
4,517,778	-	yjhU	b4295	0.42	+0.1
4,517,806	-	yjhU	b4295	0.45	+0.7
4,517,806	-	yjhU	b4295	0.45	-0.3
4,517,879	+	yjhU	b4295	0.52	+0.4
4,517,882	-	yjhU	b4295	0.53	-0.1
4,517,887	-	yjhU	b4295	0.53	-0.1
4,517,887	-	yjhU	b4295	0.53	-0.1
4,517,887	-	yjhU	b4295	0.53	+0.7
4,517,894	+	yjhU	b4295	0.54	-1.0
4,517,894	+	yjhU	b4295	0.54	+0.9
4,517,895	+	yjhU	b4295	0.54	+0.3
4,517,895	+	yjhU	b4295	0.54	-0.3
4,517,897	+	yjhU	b4295	0.54	+0.4
4,517,903	-	yjhU	b4295	0.55	+0.3
4,517,961	+	yjhU	b4295	0.61	-0.6
4,517,996	-	yjhU	b4295	0.64	-1.1
4,518,153	-	yjhU	b4295	0.80	+1.0
4,518,154	-	yjhU	b4295	0.80	+0.7
4,518,154	-	yjhU	b4295	0.80	+1.5
4,518,171	+	yjhU	b4295	0.82	-0.4
4,518,176	+	yjhU	b4295	0.83	-0.3
4,518,176	+	yjhU	b4295	0.83	+0.3
4,518,179	-	yjhU	b4295	0.83	+0.0
4,518,269	+				-0.5
4,518,355	-				-0.3
4,518,355	-				+0.3
4,518,383	+				+0.1
4,518,383	+				-0.7
4,518,425	+				-0.2
4,518,496	+				+0.5
4,518,496	+				+0.7
4,518,501	+				-0.1
4,518,509	+				-0.2
4,518,509	-				+0.3
4,518,509	-				+0.2
4,518,551	+				-0.0
4,518,551	+				-0.1
4,518,619	+				+0.4
4,518,627	-				+0.3
4,518,627	-				+0.6
4,518,638	+				-0.0
4,518,652	-				-0.2
4,518,659	+				-0.8
4,518,664	-				-0.3
4,518,667	-				-0.0
4,518,667	-				-0.2
4,518,739	+				+0.2
4,518,769	-				+0.5
4,518,769	-				-0.4
4,518,769	-				+0.8
4,518,835	-	yjhF	b4296	0.10	+0.7
4,518,860	+	yjhF	b4296	0.12	-0.4
4,518,875	+	yjhF	b4296	0.13	-0.2
4,518,875	+	yjhF	b4296	0.13	+0.1
4,518,983	+	yjhF	b4296	0.21	-0.1
4,518,983	+	yjhF	b4296	0.21	-1.4
4,518,991	-	yjhF	b4296	0.22	+1.8
4,518,991	-	yjhF	b4296	0.22	+0.3
4,518,997	+	yjhF	b4296	0.22	-0.0
4,519,082	+	yjhF	b4296	0.29	+0.3
4,519,082	+	yjhF	b4296	0.29	+0.3
4,519,088	+	yjhF	b4296	0.29	-0.3
4,519,094	+	yjhF	b4296	0.30	+0.7
4,519,115	-	yjhF	b4296	0.31	+0.0
4,519,152	+	yjhF	b4296	0.34	-1.0
4,519,152	+	yjhF	b4296	0.34	-0.0
4,519,152	+	yjhF	b4296	0.34	+0.4
4,519,160	-	yjhF	b4296	0.35	-0.3
4,519,171	-	yjhF	b4296	0.35	-1.7
4,519,171	-	yjhF	b4296	0.35	-0.5
4,519,174	+	yjhF	b4296	0.36	+1.5
4,519,184	+	yjhF	b4296	0.36	+0.4
4,519,184	+	yjhF	b4296	0.36	+0.8
4,519,186	+	yjhF	b4296	0.36	+0.5
4,519,186	+	yjhF	b4296	0.36	-1.0
4,519,245	+	yjhF	b4296	0.41	-0.2
4,519,248	-	yjhF	b4296	0.41	+0.5
4,519,253	-	yjhF	b4296	0.41	-0.3
4,519,304	-	yjhF	b4296	0.45	+0.5
4,519,308	+	yjhF	b4296	0.45	+0.1
4,519,321	-	yjhF	b4296	0.46	+0.6
4,519,335	+	yjhF	b4296	0.47	-0.1