Strain Fitness in Escherichia coli BW25113 around b3426

Experiment: 2,4-Dinitrophenol 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2,4-Dinitrophenol 2 mM
3,559,041	-	glpG	b3424	0.48	-0.0
3,559,041	-	glpG	b3424	0.48	+0.5
3,559,049	-	glpG	b3424	0.49	-0.2
3,559,056	+	glpG	b3424	0.49	+0.8
3,559,056	+	glpG	b3424	0.49	-0.2
3,559,058	-	glpG	b3424	0.50	-1.6
3,559,058	-	glpG	b3424	0.50	-0.3
3,559,117	-	glpG	b3424	0.57	+0.2
3,559,127	-	glpG	b3424	0.58	-0.9
3,559,127	-	glpG	b3424	0.58	-0.9
3,559,129	-	glpG	b3424	0.58	-1.2
3,559,160	-	glpG	b3424	0.62	-0.8
3,559,180	+	glpG	b3424	0.64	+0.3
3,559,180	+	glpG	b3424	0.64	+1.0
3,559,185	+	glpG	b3424	0.65	+0.8
3,559,193	+	glpG	b3424	0.66	+0.2
3,559,223	+	glpG	b3424	0.70	+0.8
3,559,223	+	glpG	b3424	0.70	+1.0
3,559,234	-	glpG	b3424	0.71	+0.2
3,559,259	+	glpG	b3424	0.74	+1.1
3,559,262	-	glpG	b3424	0.74	-0.9
3,559,262	-	glpG	b3424	0.74	-0.7
3,559,325	-	glpG	b3424	0.82	+0.4
3,559,342	+	glpG	b3424	0.84	+0.8
3,559,350	-	glpG	b3424	0.85	-0.5
3,559,350	-	glpG	b3424	0.85	-0.1
3,559,350	-	glpG	b3424	0.85	-0.7
3,559,350	-	glpG	b3424	0.85	-0.7
3,559,370	+	glpG	b3424	0.87	+0.0
3,559,370	+	glpG	b3424	0.87	+1.0
3,559,383	-	glpG	b3424	0.89	+0.1
3,559,405	-				-0.7
3,559,405	-				-0.2
3,559,419	-				+0.7
3,559,419	-				-0.4
3,559,439	-				+0.5
3,559,510	+				+0.7
3,559,510	+				+0.7
3,559,518	-				-1.3
3,559,583	+	glpE	b3425	0.19	-0.8
3,559,584	+	glpE	b3425	0.20	-1.9
3,559,587	-	glpE	b3425	0.20	-1.3
3,559,592	-	glpE	b3425	0.22	-1.0
3,559,592	-	glpE	b3425	0.22	-1.8
3,559,603	-	glpE	b3425	0.25	-0.7
3,559,624	-	glpE	b3425	0.32	-1.3
3,559,661	+	glpE	b3425	0.43	-0.7
3,559,663	+	glpE	b3425	0.44	-1.6
3,559,663	+	glpE	b3425	0.44	-0.4
3,559,715	+	glpE	b3425	0.60	-0.6
3,559,719	+	glpE	b3425	0.61	-0.8
3,559,719	+	glpE	b3425	0.61	-0.5
3,559,735	-	glpE	b3425	0.66	-0.6
3,559,737	+	glpE	b3425	0.66	-0.5
3,559,741	+	glpE	b3425	0.68	-0.7
3,559,745	-	glpE	b3425	0.69	-0.5
3,559,822	+				+0.3
3,559,848	-				-0.8
3,559,891	+				-0.7
3,559,899	-				-1.4
3,559,922	+				-1.0
3,559,927	+				-1.4
3,559,927	+				-0.1
3,559,930	-				-0.9
3,560,077	-				-4.1
3,560,194	+	glpD	b3426	0.10	-3.5
3,560,199	+	glpD	b3426	0.11	-1.5
3,560,265	-	glpD	b3426	0.15	-2.9
3,560,273	+	glpD	b3426	0.16	-2.6
3,560,358	-	glpD	b3426	0.21	-0.8
3,560,358	-	glpD	b3426	0.21	-2.1
3,560,369	+	glpD	b3426	0.22	-2.3
3,560,466	+	glpD	b3426	0.29	-2.0
3,560,594	+	glpD	b3426	0.37	-0.0
3,560,657	-	glpD	b3426	0.41	-1.0
3,560,657	-	glpD	b3426	0.41	-1.8
3,560,730	+	glpD	b3426	0.46	-1.8
3,560,738	-	glpD	b3426	0.47	-1.9
3,560,767	+	glpD	b3426	0.49	-3.0
3,560,775	-	glpD	b3426	0.49	-1.4
3,560,803	+	glpD	b3426	0.51	-2.5
3,560,803	+	glpD	b3426	0.51	-2.3
3,560,860	-	glpD	b3426	0.55	-1.1
3,560,867	-	glpD	b3426	0.55	-2.2
3,560,867	-	glpD	b3426	0.55	-0.8
3,560,926	-	glpD	b3426	0.59	-3.4
3,560,926	-	glpD	b3426	0.59	-1.1
3,560,932	+	glpD	b3426	0.59	-1.7
3,560,978	+	glpD	b3426	0.63	-2.1
3,560,978	+	glpD	b3426	0.63	-1.9
3,561,021	+	glpD	b3426	0.65	-1.5
3,561,074	+	glpD	b3426	0.69	-3.3
3,561,159	+	glpD	b3426	0.75	-2.3
3,561,164	+	glpD	b3426	0.75	-2.7
3,561,231	-	glpD	b3426	0.79	-1.9
3,561,231	-	glpD	b3426	0.79	-2.7
3,561,247	+	glpD	b3426	0.80	-3.2
3,561,503	+				-1.0
3,561,503	+				-1.1
3,561,510	+				+1.3
3,561,522	+				+0.5
3,561,525	-				+0.2
3,561,672	-				+0.3
3,561,767	-				-1.0
3,561,869	+	yzgL	b3427	0.27	+0.5
3,561,923	+	yzgL	b3427	0.52	+0.4
3,561,923	+	yzgL	b3427	0.52	-0.5
3,561,968	+	yzgL	b3427	0.72	+0.0
3,561,976	-	yzgL	b3427	0.76	+0.2
3,561,976	-	yzgL	b3427	0.76	+0.1
3,561,976	-	yzgL	b3427	0.76	-1.1
3,562,075	+				+0.1
3,562,075	-				+1.0
3,562,084	+				-0.1
3,562,092	-				-0.5
3,562,128	+				+1.0
3,562,128	+				+0.9
3,562,138	+				+0.1
3,562,146	-				-0.1
3,562,194	+				+1.0
3,562,226	-				+0.4
3,562,226	-				-1.6
3,562,226	-				-0.1
3,562,244	+				-1.1
3,562,250	-				-0.4
3,562,250	-				+0.2
3,562,263	-				+0.1
3,562,271	-				+0.9
3,562,271	-				+0.4
3,562,304	-				-0.6
3,562,318	-				+0.3
3,562,330	-				-0.5
3,562,359	-				-0.8
3,562,359	-				-0.4
3,562,526	-	glgP	b3428	0.15	-0.9