Strain Fitness in Escherichia coli BW25113 around b3091

Experiment: 2,4-Dinitrophenol 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2,4-Dinitrophenol 2 mM
3,238,878	+	sstT	b3089	0.73	-0.8
3,238,878	+	sstT	b3089	0.73	-1.3
3,238,917	-	sstT	b3089	0.76	+0.0
3,238,937	+	sstT	b3089	0.78	-0.7
3,238,949	+	sstT	b3089	0.79	+0.2
3,239,032	+	sstT	b3089	0.86	+0.7
3,239,040	-	sstT	b3089	0.86	+0.3
3,239,040	-	sstT	b3089	0.86	-0.1
3,239,064	-	sstT	b3089	0.88	-0.0
3,239,064	-	sstT	b3089	0.88	-0.3
3,239,088	+				+0.2
3,239,100	+				-0.4
3,239,100	+				+0.2
3,239,102	-				+0.5
3,239,102	-				+0.2
3,239,152	-				+0.5
3,239,152	-				-0.1
3,239,348	+	ygjV	b3090	0.24	-0.2
3,239,360	+	ygjV	b3090	0.26	+0.1
3,239,368	+	ygjV	b3090	0.28	-0.6
3,239,400	+	ygjV	b3090	0.34	-0.1
3,239,400	+	ygjV	b3090	0.34	+0.0
3,239,424	-	ygjV	b3090	0.38	+0.2
3,239,487	+	ygjV	b3090	0.49	+0.3
3,239,526	-	ygjV	b3090	0.56	+0.5
3,239,544	+	ygjV	b3090	0.60	+0.2
3,239,544	+	ygjV	b3090	0.60	+0.6
3,239,552	-	ygjV	b3090	0.61	-0.1
3,239,585	+	ygjV	b3090	0.67	+0.1
3,239,585	+	ygjV	b3090	0.67	+0.1
3,239,653	+	ygjV	b3090	0.79	+0.1
3,239,741	+				-0.6
3,239,741	+				-0.6
3,239,807	+				-0.2
3,239,899	-				-1.4
3,239,899	-				-1.0
3,239,937	-				-0.4
3,239,973	+				+0.5
3,239,986	-				-0.3
3,240,082	-	uxaA	b3091	0.16	-0.4
3,240,094	-	uxaA	b3091	0.16	-0.6
3,240,094	-	uxaA	b3091	0.16	+0.2
3,240,096	+	uxaA	b3091	0.17	+0.0
3,240,096	+	uxaA	b3091	0.17	-0.1
3,240,099	-	uxaA	b3091	0.17	-0.2
3,240,106	+	uxaA	b3091	0.17	+0.4
3,240,114	-	uxaA	b3091	0.18	-0.8
3,240,128	+	uxaA	b3091	0.19	+0.1
3,240,166	+	uxaA	b3091	0.21	+0.3
3,240,166	+	uxaA	b3091	0.21	+1.1
3,240,176	+	uxaA	b3091	0.22	+0.5
3,240,176	+	uxaA	b3091	0.22	-0.0
3,240,255	-	uxaA	b3091	0.27	+0.4
3,240,262	-	uxaA	b3091	0.28	-0.1
3,240,277	+	uxaA	b3091	0.29	-0.1
3,240,277	+	uxaA	b3091	0.29	+0.2
3,240,277	+	uxaA	b3091	0.29	-0.6
3,240,281	+	uxaA	b3091	0.29	-0.6
3,240,347	-	uxaA	b3091	0.33	-0.8
3,240,347	-	uxaA	b3091	0.33	+0.2
3,240,347	-	uxaA	b3091	0.33	-0.3
3,240,359	+	uxaA	b3091	0.34	-0.3
3,240,359	+	uxaA	b3091	0.34	-0.2
3,240,415	-	uxaA	b3091	0.38	-0.4
3,240,415	-	uxaA	b3091	0.38	-0.3
3,240,454	+	uxaA	b3091	0.41	+0.6
3,240,454	+	uxaA	b3091	0.41	-0.8
3,240,470	-	uxaA	b3091	0.42	-0.6
3,240,556	-	uxaA	b3091	0.48	+0.0
3,240,614	-	uxaA	b3091	0.51	-0.6
3,240,661	-	uxaA	b3091	0.55	+0.4
3,240,661	-	uxaA	b3091	0.55	-0.8
3,240,743	+	uxaA	b3091	0.60	-0.4
3,240,743	+	uxaA	b3091	0.60	+0.2
3,240,768	-	uxaA	b3091	0.62	+0.4
3,240,810	+	uxaA	b3091	0.65	+0.8
3,240,810	+	uxaA	b3091	0.65	-0.7
3,240,840	-	uxaA	b3091	0.67	-0.7
3,240,840	-	uxaA	b3091	0.67	-0.3
3,240,842	+	uxaA	b3091	0.67	+0.1
3,240,842	+	uxaA	b3091	0.67	-0.3
3,240,886	-	uxaA	b3091	0.70	+0.0
3,240,944	+	uxaA	b3091	0.74	+0.1
3,240,944	+	uxaA	b3091	0.74	-0.0
3,240,944	+	uxaA	b3091	0.74	-0.3
3,240,977	-	uxaA	b3091	0.76	-0.3
3,240,977	-	uxaA	b3091	0.76	+0.6
3,240,987	-	uxaA	b3091	0.76	+0.1
3,241,015	+	uxaA	b3091	0.78	-0.3
3,241,034	+	uxaA	b3091	0.80	-0.2
3,241,075	-	uxaA	b3091	0.82	+0.1
3,241,101	+	uxaA	b3091	0.84	+0.7
3,241,108	-	uxaA	b3091	0.85	-0.4
3,241,237	+				-0.3
3,241,255	-				+0.6
3,241,255	-				-0.1
3,241,349	+				+0.1
3,241,349	+				-1.2
3,241,383	-				+0.4
3,241,383	-				-0.2
3,241,526	-	uxaC	b3092	0.12	+0.0
3,241,526	-	uxaC	b3092	0.12	-1.3
3,241,560	+	uxaC	b3092	0.15	+0.1
3,241,628	+	uxaC	b3092	0.20	+0.1
3,241,628	+	uxaC	b3092	0.20	-0.3
3,241,682	-	uxaC	b3092	0.23	-0.5
3,241,682	-	uxaC	b3092	0.23	+0.2
3,241,715	-	uxaC	b3092	0.26	+0.1
3,241,725	-	uxaC	b3092	0.26	+0.4
3,241,848	+	uxaC	b3092	0.35	+0.5
3,241,853	+	uxaC	b3092	0.36	-0.4
3,241,879	+	uxaC	b3092	0.37	+0.7
3,241,879	+	uxaC	b3092	0.37	-0.4
3,241,881	+	uxaC	b3092	0.38	+0.2
3,241,884	-	uxaC	b3092	0.38	-0.6
3,241,884	-	uxaC	b3092	0.38	-0.1
3,241,884	-	uxaC	b3092	0.38	-0.2
3,241,889	-	uxaC	b3092	0.38	+0.8
3,241,889	-	uxaC	b3092	0.38	-0.7
3,241,952	-	uxaC	b3092	0.43	-1.5
3,241,974	-	uxaC	b3092	0.44	-0.4
3,241,976	+	uxaC	b3092	0.44	+0.9
3,241,976	+	uxaC	b3092	0.44	-0.3
3,242,037	+	uxaC	b3092	0.49	-0.5
3,242,037	+	uxaC	b3092	0.49	-0.4
3,242,056	-	uxaC	b3092	0.50	+0.3
3,242,066	-	uxaC	b3092	0.51	-0.1
3,242,068	-	uxaC	b3092	0.51	+0.2
3,242,068	-	uxaC	b3092	0.51	+1.2
3,242,068	-	uxaC	b3092	0.51	-0.0
3,242,137	+	uxaC	b3092	0.56	+0.3
3,242,167	+	uxaC	b3092	0.58	+0.0
3,242,184	-	uxaC	b3092	0.59	-2.9
3,242,184	-	uxaC	b3092	0.59	-2.1
3,242,221	-	uxaC	b3092	0.62	+0.6
3,242,221	-	uxaC	b3092	0.62	-0.0
3,242,271	+	uxaC	b3092	0.65	-0.1
3,242,333	-	uxaC	b3092	0.69	-0.1