Strain Fitness in Escherichia coli BW25113 around b2795

Experiment: 2,4-Dinitrophenol 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2,4-Dinitrophenol 2 mM
2,923,361	-				+0.3
2,923,361	-				-0.1
2,923,454	-				+0.7
2,923,460	-	yqcD	b2794	0.11	-0.1
2,923,537	-	yqcD	b2794	0.20	+0.5
2,923,537	-	yqcD	b2794	0.20	+0.6
2,923,597	-	yqcD	b2794	0.27	-0.6
2,923,597	-	yqcD	b2794	0.27	+0.5
2,923,663	-	yqcD	b2794	0.35	-0.2
2,923,749	-	yqcD	b2794	0.45	-0.2
2,923,749	-	yqcD	b2794	0.45	+0.8
2,923,812	+	yqcD	b2794	0.52	-0.2
2,923,901	+	yqcD	b2794	0.63	-0.7
2,923,946	-	yqcD	b2794	0.68	+0.4
2,923,958	+	yqcD	b2794	0.69	+0.2
2,924,129	+	yqcD	b2794	0.89	-1.8
2,924,129	+	yqcD	b2794	0.89	+0.3
2,924,159	+				+0.3
2,924,362	+				+0.9
2,924,362	+				+0.2
2,924,386	+				-1.3
2,924,386	+				-0.2
2,924,421	+				+0.5
2,924,421	+				-0.6
2,924,429	-				-0.2
2,924,429	-				+0.1
2,924,436	+				-0.3
2,924,436	+				+0.1
2,924,437	-				-1.1
2,924,471	+	ygdH	b2795	0.10	+0.6
2,924,471	+	ygdH	b2795	0.10	-0.1
2,924,566	+	ygdH	b2795	0.17	-1.4
2,924,614	-	ygdH	b2795	0.21	-0.0
2,924,642	-	ygdH	b2795	0.23	-1.1
2,924,727	+	ygdH	b2795	0.29	-0.1
2,924,742	-	ygdH	b2795	0.30	-0.3
2,924,742	-	ygdH	b2795	0.30	-0.1
2,924,783	-	ygdH	b2795	0.33	+0.2
2,924,783	-	ygdH	b2795	0.33	-0.4
2,924,822	+				+0.6
2,924,822	+	ygdH	b2795	0.36	-0.3
2,924,880	+	ygdH	b2795	0.40	-0.4
2,924,894	-	ygdH	b2795	0.41	-0.8
2,924,907	-	ygdH	b2795	0.42	+0.8
2,924,916	+	ygdH	b2795	0.43	-0.5
2,924,978	-	ygdH	b2795	0.47	-0.4
2,925,001	+	ygdH	b2795	0.49	-1.5
2,925,001	+	ygdH	b2795	0.49	+0.2
2,925,060	+	ygdH	b2795	0.53	-0.6
2,925,094	+	ygdH	b2795	0.56	-0.8
2,925,094	+	ygdH	b2795	0.56	+0.6
2,925,110	-	ygdH	b2795	0.57	-0.5
2,925,114	-	ygdH	b2795	0.57	+0.2
2,925,138	-	ygdH	b2795	0.59	+0.1
2,925,138	-	ygdH	b2795	0.59	+1.1
2,925,169	+	ygdH	b2795	0.61	-1.0
2,925,169	+	ygdH	b2795	0.61	+0.2
2,925,182	+	ygdH	b2795	0.62	-2.0
2,925,182	+	ygdH	b2795	0.62	-1.5
2,925,239	-	ygdH	b2795	0.67	-0.3
2,925,239	-	ygdH	b2795	0.67	-0.7
2,925,287	+	ygdH	b2795	0.70	-0.7
2,925,302	-	ygdH	b2795	0.71	-0.7
2,925,302	-	ygdH	b2795	0.71	+0.2
2,925,302	-	ygdH	b2795	0.71	-0.7
2,925,302	-	ygdH	b2795	0.71	-0.4
2,925,431	-	ygdH	b2795	0.81	+0.1
2,925,453	-	ygdH	b2795	0.82	-0.4
2,925,483	+	ygdH	b2795	0.84	-0.8
2,925,483	+	ygdH	b2795	0.84	-0.5
2,925,488	+	ygdH	b2795	0.85	-0.8
2,925,503	-	ygdH	b2795	0.86	-0.2
2,925,662	+				-1.2
2,925,670	-				+0.8
2,925,780	+				-0.1
2,925,793	-				+0.4
2,925,807	-				+0.3
2,925,807	-				-0.1
2,925,951	-				-0.4
2,926,089	+				-1.4
2,926,089	+				-0.6
2,926,096	+				-3.1
2,926,104	-				+0.8
2,926,268	+				+1.1
2,926,268	+				+1.2
2,926,299	-				+1.2
2,926,299	-				+0.9
2,926,312	-				+0.7
2,926,312	-				-0.1
2,926,318	-				+0.8
2,926,350	-				+0.9
2,926,375	-				+0.7
2,926,375	-				+0.4
2,926,387	+	sdaC	b2796	0.11	+0.4
2,926,396	+	sdaC	b2796	0.11	+0.4
2,926,396	+	sdaC	b2796	0.11	+0.6
2,926,401	-	sdaC	b2796	0.12	+0.5
2,926,458	+	sdaC	b2796	0.16	+1.2
2,926,458	+	sdaC	b2796	0.16	+0.8
2,926,519	-	sdaC	b2796	0.21	+0.5
2,926,519	-	sdaC	b2796	0.21	+1.0
2,926,559	+	sdaC	b2796	0.24	+0.7
2,926,583	-	sdaC	b2796	0.26	+1.3
2,926,583	-	sdaC	b2796	0.26	+1.9
2,926,634	-	sdaC	b2796	0.30	+0.6
2,926,634	-	sdaC	b2796	0.30	+2.5
2,926,646	+	sdaC	b2796	0.31	+0.0
2,926,646	+	sdaC	b2796	0.31	-1.6