Strain Fitness in Escherichia coli BW25113 around b2285
Experiment: 2,4-Dinitrophenol 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2,4-Dinitrophenol 2 mM |
---|---|---|---|---|---|
remove | |||||
2,398,610 | + | nuoF | b2284 | 0.28 | -2.5 |
2,398,770 | + | nuoF | b2284 | 0.40 | -2.8 |
2,398,778 | + | nuoF | b2284 | 0.40 | -2.4 |
2,398,795 | - | nuoF | b2284 | 0.41 | -2.1 |
2,398,831 | - | nuoF | b2284 | 0.44 | -2.6 |
2,398,874 | - | nuoF | b2284 | 0.47 | -1.2 |
2,398,876 | + | nuoF | b2284 | 0.48 | -0.1 |
2,398,883 | + | nuoF | b2284 | 0.48 | -2.8 |
2,398,914 | + | nuoF | b2284 | 0.50 | -0.3 |
2,398,914 | + | -0.5 | |||
2,398,964 | + | nuoF | b2284 | 0.54 | -1.3 |
2,398,964 | + | nuoF | b2284 | 0.54 | -2.1 |
2,399,113 | - | nuoF | b2284 | 0.65 | -1.7 |
2,399,283 | - | nuoF | b2284 | 0.78 | -1.3 |
2,399,293 | - | nuoF | b2284 | 0.79 | -2.4 |
2,399,314 | - | nuoF | b2284 | 0.80 | -1.4 |
2,399,405 | - | nuoF | b2284 | 0.87 | -1.1 |
2,399,405 | - | nuoF | b2284 | 0.87 | -2.1 |
2,399,406 | - | nuoF | b2284 | 0.87 | -1.4 |
2,399,461 | + | -2.1 | |||
2,399,461 | + | -1.2 | |||
2,399,508 | - | -1.7 | |||
2,399,626 | + | -0.8 | |||
2,399,626 | + | nuoE | b2285 | 0.10 | -2.3 |
2,399,725 | + | nuoE | b2285 | 0.30 | -3.3 |
2,399,863 | - | nuoE | b2285 | 0.58 | -0.7 |
2,399,948 | - | nuoE | b2285 | 0.75 | -1.2 |
2,399,972 | + | nuoE | b2285 | 0.79 | -3.3 |
2,400,031 | - | -2.7 | |||
2,400,113 | + | -1.4 | |||
2,400,113 | + | -2.7 | |||
2,400,221 | - | -2.1 | |||
2,400,221 | - | -1.7 | |||
2,400,254 | + | -3.1 | |||
2,400,254 | - | -0.9 | |||
2,400,327 | - | nuoC | b2286 | 0.14 | -2.8 |
2,400,349 | - | nuoC | b2286 | 0.15 | -2.7 |
2,400,357 | - | nuoC | b2286 | 0.16 | -2.5 |
2,400,431 | + | nuoC | b2286 | 0.20 | -3.2 |
2,400,565 | - | nuoC | b2286 | 0.27 | -2.5 |
2,400,683 | - | nuoC | b2286 | 0.34 | -1.9 |
2,400,683 | - | nuoC | b2286 | 0.34 | -2.1 |
2,401,060 | + | nuoC | b2286 | 0.55 | -1.8 |
2,401,073 | - | nuoC | b2286 | 0.56 | -2.8 |
2,401,073 | - | nuoC | b2286 | 0.56 | -3.0 |
Or see this region's nucleotide sequence