Strain Fitness in Escherichia coli BW25113 around b2243
Experiment: 2,4-Dinitrophenol 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2,4-Dinitrophenol 2 mM |
---|---|---|---|---|---|
remove | |||||
2,352,547 | + | glpB | b2242 | 0.21 | +1.1 |
2,352,631 | + | glpB | b2242 | 0.27 | +0.2 |
2,352,650 | + | glpB | b2242 | 0.29 | +0.3 |
2,352,650 | + | glpB | b2242 | 0.29 | +0.8 |
2,352,787 | - | glpB | b2242 | 0.40 | -0.2 |
2,353,281 | + | glpB | b2242 | 0.79 | -0.2 |
2,353,291 | + | glpB | b2242 | 0.80 | +0.1 |
2,353,291 | + | glpB | b2242 | 0.80 | +0.2 |
2,353,326 | - | glpB | b2242 | 0.82 | +0.4 |
2,353,326 | - | glpB | b2242 | 0.82 | +0.3 |
2,353,379 | - | glpB | b2242 | 0.87 | -0.1 |
2,353,400 | + | glpB | b2242 | 0.88 | +0.9 |
2,353,400 | + | glpB | b2242 | 0.88 | +0.0 |
2,353,436 | + | +0.7 | |||
2,353,436 | + | -0.0 | |||
2,353,446 | + | -0.1 | |||
2,353,575 | - | +1.5 | |||
2,353,575 | - | +1.0 | |||
2,353,577 | + | -0.7 | |||
2,353,577 | + | -0.2 | |||
2,353,615 | - | -0.1 | |||
2,353,684 | + | glpC | b2243 | 0.12 | -0.1 |
2,353,686 | + | glpC | b2243 | 0.12 | +0.1 |
2,353,696 | - | glpC | b2243 | 0.13 | -1.4 |
2,353,696 | - | glpC | b2243 | 0.13 | +1.2 |
2,353,767 | + | glpC | b2243 | 0.19 | -0.0 |
2,353,812 | + | glpC | b2243 | 0.23 | +0.1 |
2,353,853 | + | glpC | b2243 | 0.26 | -0.5 |
2,353,853 | + | glpC | b2243 | 0.26 | -0.2 |
2,353,871 | - | glpC | b2243 | 0.28 | +0.2 |
2,354,115 | - | glpC | b2243 | 0.48 | -0.2 |
2,354,125 | - | glpC | b2243 | 0.49 | +0.2 |
2,354,125 | - | glpC | b2243 | 0.49 | +0.8 |
2,354,169 | + | glpC | b2243 | 0.53 | -0.2 |
2,354,278 | - | glpC | b2243 | 0.62 | +0.2 |
2,354,438 | - | glpC | b2243 | 0.75 | -1.1 |
2,354,534 | + | glpC | b2243 | 0.83 | +0.2 |
2,354,542 | - | glpC | b2243 | 0.84 | +0.5 |
2,354,591 | + | glpC | b2243 | 0.88 | -1.2 |
2,354,676 | + | +0.8 | |||
2,354,676 | + | -0.2 | |||
2,354,684 | - | +0.3 | |||
2,354,752 | + | +0.6 | |||
2,354,793 | - | +0.2 | |||
2,354,793 | - | -0.0 | |||
2,354,892 | - | +1.0 | |||
2,354,926 | - | +0.6 | |||
2,354,926 | - | -0.0 | |||
2,354,941 | - | -0.2 | |||
2,354,941 | - | -0.3 | |||
2,355,020 | + | yfaD | b2244 | 0.10 | -0.6 |
2,355,149 | + | yfaD | b2244 | 0.25 | -0.5 |
2,355,322 | - | yfaD | b2244 | 0.44 | -0.1 |
2,355,322 | - | yfaD | b2244 | 0.44 | +0.3 |
2,355,322 | - | yfaD | b2244 | 0.44 | +0.0 |
2,355,369 | + | yfaD | b2244 | 0.49 | +0.3 |
2,355,396 | + | yfaD | b2244 | 0.52 | -0.1 |
2,355,438 | + | yfaD | b2244 | 0.57 | +0.7 |
2,355,438 | + | yfaD | b2244 | 0.57 | +0.4 |
2,355,448 | + | yfaD | b2244 | 0.58 | -0.2 |
2,355,448 | + | yfaD | b2244 | 0.58 | +0.1 |
2,355,448 | + | yfaD | b2244 | 0.58 | +0.1 |
2,355,499 | + | yfaD | b2244 | 0.64 | +0.5 |
2,355,665 | - | yfaD | b2244 | 0.82 | +0.1 |
Or see this region's nucleotide sequence