Strain Fitness in Escherichia coli BW25113 around b1662
Experiment: 2,4-Dinitrophenol 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2,4-Dinitrophenol 2 mM |
---|---|---|---|---|---|
remove | |||||
1,739,797 | + | cfa | b1661 | 0.31 | +0.8 |
1,740,198 | - | cfa | b1661 | 0.66 | +1.5 |
1,740,226 | - | cfa | b1661 | 0.69 | +0.7 |
1,740,389 | + | cfa | b1661 | 0.83 | +1.0 |
1,740,447 | + | cfa | b1661 | 0.88 | +1.3 |
1,740,447 | + | cfa | b1661 | 0.88 | +1.6 |
1,740,449 | + | cfa | b1661 | 0.88 | +0.6 |
1,740,449 | + | cfa | b1661 | 0.88 | +0.5 |
1,740,505 | - | +0.7 | |||
1,740,538 | + | -0.0 | |||
1,741,305 | + | -1.4 | |||
1,741,305 | + | -0.5 | |||
1,741,328 | - | +0.3 | |||
1,741,333 | - | -0.2 | |||
1,741,342 | + | -0.9 | |||
1,741,736 | - | mdtK | b1663 | 0.19 | +0.6 |
1,741,736 | - | mdtK | b1663 | 0.19 | -0.2 |
1,741,798 | + | mdtK | b1663 | 0.23 | +0.8 |
1,741,798 | + | mdtK | b1663 | 0.23 | -0.5 |
1,741,928 | - | mdtK | b1663 | 0.33 | -0.6 |
1,742,088 | - | mdtK | b1663 | 0.44 | -0.0 |
1,742,235 | + | mdtK | b1663 | 0.55 | -0.1 |
1,742,237 | + | mdtK | b1663 | 0.55 | -1.2 |
1,742,253 | - | mdtK | b1663 | 0.56 | -0.3 |
Or see this region's nucleotide sequence