Strain Fitness in Escherichia coli BW25113 around b1499
Experiment: 2,4-Dinitrophenol 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2,4-Dinitrophenol 2 mM |
---|---|---|---|---|---|
remove | |||||
1,579,961 | + | b1498 | b1498 | 0.65 | +0.3 |
1,579,980 | - | b1498 | b1498 | 0.66 | +0.0 |
1,580,024 | - | b1498 | b1498 | 0.69 | -0.2 |
1,580,063 | + | b1498 | b1498 | 0.71 | -0.5 |
1,580,078 | - | b1498 | b1498 | 0.72 | -0.4 |
1,580,112 | - | b1498 | b1498 | 0.74 | +0.1 |
1,580,124 | - | b1498 | b1498 | 0.75 | +0.7 |
1,580,147 | - | b1498 | b1498 | 0.76 | -0.4 |
1,580,172 | - | b1498 | b1498 | 0.78 | -0.8 |
1,580,174 | + | b1498 | b1498 | 0.78 | -0.4 |
1,580,186 | + | b1498 | b1498 | 0.78 | +0.0 |
1,580,201 | - | b1498 | b1498 | 0.79 | +0.3 |
1,580,281 | - | b1498 | b1498 | 0.84 | -0.7 |
1,580,352 | + | b1498 | b1498 | 0.88 | +0.5 |
1,580,383 | + | +0.5 | |||
1,580,454 | - | +0.9 | |||
1,580,497 | + | -0.3 | |||
1,580,525 | - | -0.1 | |||
1,580,539 | - | -0.4 | |||
1,580,549 | - | -0.0 | |||
1,580,918 | - | +0.3 | |||
1,580,924 | + | +0.1 | |||
1,580,978 | + | +0.2 | |||
1,581,015 | + | -0.3 | |||
1,581,015 | + | +0.2 | |||
1,581,085 | - | ydeO | b1499 | 0.18 | +0.1 |
1,581,214 | - | ydeO | b1499 | 0.35 | -0.4 |
1,582,355 | + | +0.1 | |||
1,582,363 | - | -0.4 | |||
1,582,363 | - | -1.5 | |||
1,582,363 | - | +0.1 | |||
1,582,370 | - | +1.6 | |||
1,582,400 | - | -0.4 | |||
1,582,400 | - | -0.7 | |||
1,582,409 | - | -0.9 | |||
1,582,463 | + | YdeP | b1501 | 0.10 | +0.1 |
1,582,512 | + | YdeP | b1501 | 0.12 | +0.2 |
1,582,515 | - | YdeP | b1501 | 0.12 | +0.2 |
1,582,527 | + | YdeP | b1501 | 0.13 | +0.5 |
1,582,530 | + | YdeP | b1501 | 0.13 | +0.1 |
1,582,538 | - | YdeP | b1501 | 0.13 | +0.4 |
1,582,538 | - | YdeP | b1501 | 0.13 | -1.4 |
1,582,564 | + | YdeP | b1501 | 0.15 | -0.8 |
1,582,575 | - | YdeP | b1501 | 0.15 | -0.3 |
Or see this region's nucleotide sequence