Strain Fitness in Escherichia coli BW25113 around b0733

Experiment: 2,4-Dinitrophenol 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntmngB and cydA are separated by 846 nucleotidescydA and cydB are separated by 15 nucleotides b0732: mngB - alpha-mannosidase (NCBI), at 767,201 to 769,834 mngB b0733: cydA - cytochrome d terminal oxidase, polypeptide subunit I (VIMSS), at 770,681 to 772,249 cydA b0734: cydB - cytochrome d terminal oxidase, subunit II (NCBI), at 772,265 to 773,404 cydB Position (kb) 770 771 772 773Strain fitness (log2 ratio) -2 -1 0 1at 769.737 kb on + strandat 769.737 kb on + strandat 769.747 kb on + strandat 769.755 kb on - strandat 769.771 kb on - strandat 769.812 kb on - strandat 769.855 kb on + strandat 769.874 kb on + strandat 769.895 kb on - strandat 769.895 kb on - strandat 769.927 kb on - strandat 769.947 kb on + strandat 769.954 kb on + strandat 769.964 kb on + strandat 769.964 kb on + strandat 769.966 kb on + strandat 769.971 kb on + strandat 769.972 kb on - strandat 769.972 kb on - strandat 769.974 kb on + strandat 769.976 kb on + strandat 769.976 kb on + strandat 769.976 kb on + strandat 769.980 kb on + strandat 769.980 kb on + strandat 769.981 kb on + strandat 769.992 kb on - strandat 770.009 kb on + strandat 770.016 kb on + strandat 770.034 kb on - strandat 770.045 kb on - strandat 770.045 kb on - strandat 770.053 kb on + strandat 770.132 kb on + strandat 770.144 kb on + strandat 770.144 kb on + strandat 770.151 kb on - strandat 770.153 kb on - strandat 770.160 kb on + strandat 770.160 kb on + strandat 770.168 kb on - strandat 770.198 kb on - strandat 770.203 kb on + strandat 770.206 kb on - strandat 770.257 kb on + strandat 770.277 kb on - strandat 770.310 kb on - strandat 770.310 kb on - strandat 770.322 kb on - strandat 770.322 kb on - strandat 770.346 kb on + strandat 770.346 kb on + strandat 770.354 kb on - strandat 770.354 kb on - strandat 770.354 kb on - strandat 770.356 kb on - strandat 770.356 kb on - strandat 770.402 kb on - strandat 770.402 kb on - strandat 770.437 kb on + strandat 770.582 kb on + strandat 770.582 kb on + strandat 770.619 kb on + strandat 770.625 kb on + strandat 770.661 kb on + strandat 772.204 kb on + strandat 772.222 kb on + strandat 772.222 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2,4-Dinitrophenol 2 mM
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769,737 + +0.9
769,737 + -1.1
769,747 + -0.5
769,755 - -0.0
769,771 - -0.7
769,812 - -1.2
769,855 + +0.1
769,874 + -0.4
769,895 - -0.2
769,895 - -1.3
769,927 - -0.6
769,947 + -0.4
769,954 + +0.1
769,964 + -0.8
769,964 + +1.1
769,966 + +0.7
769,971 + -0.1
769,972 - -0.3
769,972 - +0.6
769,974 + +0.3
769,976 + -1.1
769,976 + +0.8
769,976 + +0.3
769,980 + -1.3
769,980 + -0.6
769,981 + +0.2
769,992 - -0.3
770,009 + -0.4
770,016 + -0.6
770,034 - -0.9
770,045 - -0.3
770,045 - +0.9
770,053 + -0.4
770,132 + -0.0
770,144 + +0.4
770,144 + -0.6
770,151 - -1.0
770,153 - -0.7
770,160 + -0.0
770,160 + -0.1
770,168 - -0.5
770,198 - -0.8
770,203 + +0.3
770,206 - -2.1
770,257 + +0.7
770,277 - -0.4
770,310 - -2.3
770,310 - -1.7
770,322 - +1.4
770,322 - -1.5
770,346 + +0.3
770,346 + +0.3
770,354 - +0.2
770,354 - -0.6
770,354 - -0.4
770,356 - +0.3
770,356 - -0.8
770,402 - -0.8
770,402 - -1.1
770,437 + -0.3
770,582 + -0.0
770,582 + -0.7
770,619 + -1.0
770,625 + -1.4
770,661 + -0.4
772,204 + -1.5
772,222 + -2.4
772,222 + -1.5

Or see this region's nucleotide sequence