Experiment: 2,4-Dinitrophenol 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mngB and cydA are separated by 846 nucleotides cydA and cydB are separated by 15 nucleotides
b0732: mngB - alpha-mannosidase (NCBI), at 767,201 to 769,834
mngB
b0733: cydA - cytochrome d terminal oxidase, polypeptide subunit I (VIMSS), at 770,681 to 772,249
cydA
b0734: cydB - cytochrome d terminal oxidase, subunit II (NCBI), at 772,265 to 773,404
cydB
Position (kb)
770
771
772
773 Strain fitness (log2 ratio)
-2
-1
0
1 at 769.737 kb on + strand at 769.737 kb on + strand at 769.747 kb on + strand at 769.755 kb on - strand at 769.771 kb on - strand at 769.812 kb on - strand at 769.855 kb on + strand at 769.874 kb on + strand at 769.895 kb on - strand at 769.895 kb on - strand at 769.927 kb on - strand at 769.947 kb on + strand at 769.954 kb on + strand at 769.964 kb on + strand at 769.964 kb on + strand at 769.966 kb on + strand at 769.971 kb on + strand at 769.972 kb on - strand at 769.972 kb on - strand at 769.974 kb on + strand at 769.976 kb on + strand at 769.976 kb on + strand at 769.976 kb on + strand at 769.980 kb on + strand at 769.980 kb on + strand at 769.981 kb on + strand at 769.992 kb on - strand at 770.009 kb on + strand at 770.016 kb on + strand at 770.034 kb on - strand at 770.045 kb on - strand at 770.045 kb on - strand at 770.053 kb on + strand at 770.132 kb on + strand at 770.144 kb on + strand at 770.144 kb on + strand at 770.151 kb on - strand at 770.153 kb on - strand at 770.160 kb on + strand at 770.160 kb on + strand at 770.168 kb on - strand at 770.198 kb on - strand at 770.203 kb on + strand at 770.206 kb on - strand at 770.257 kb on + strand at 770.277 kb on - strand at 770.310 kb on - strand at 770.310 kb on - strand at 770.322 kb on - strand at 770.322 kb on - strand at 770.346 kb on + strand at 770.346 kb on + strand at 770.354 kb on - strand at 770.354 kb on - strand at 770.354 kb on - strand at 770.356 kb on - strand at 770.356 kb on - strand at 770.402 kb on - strand at 770.402 kb on - strand at 770.437 kb on + strand at 770.582 kb on + strand at 770.582 kb on + strand at 770.619 kb on + strand at 770.625 kb on + strand at 770.661 kb on + strand at 772.204 kb on + strand at 772.222 kb on + strand at 772.222 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2,4-Dinitrophenol 2 mM remove 769,737 + +0.9 769,737 + -1.1 769,747 + -0.5 769,755 - -0.0 769,771 - -0.7 769,812 - -1.2 769,855 + +0.1 769,874 + -0.4 769,895 - -0.2 769,895 - -1.3 769,927 - -0.6 769,947 + -0.4 769,954 + +0.1 769,964 + -0.8 769,964 + +1.1 769,966 + +0.7 769,971 + -0.1 769,972 - -0.3 769,972 - +0.6 769,974 + +0.3 769,976 + -1.1 769,976 + +0.8 769,976 + +0.3 769,980 + -1.3 769,980 + -0.6 769,981 + +0.2 769,992 - -0.3 770,009 + -0.4 770,016 + -0.6 770,034 - -0.9 770,045 - -0.3 770,045 - +0.9 770,053 + -0.4 770,132 + -0.0 770,144 + +0.4 770,144 + -0.6 770,151 - -1.0 770,153 - -0.7 770,160 + -0.0 770,160 + -0.1 770,168 - -0.5 770,198 - -0.8 770,203 + +0.3 770,206 - -2.1 770,257 + +0.7 770,277 - -0.4 770,310 - -2.3 770,310 - -1.7 770,322 - +1.4 770,322 - -1.5 770,346 + +0.3 770,346 + +0.3 770,354 - +0.2 770,354 - -0.6 770,354 - -0.4 770,356 - +0.3 770,356 - -0.8 770,402 - -0.8 770,402 - -1.1 770,437 + -0.3 770,582 + -0.0 770,582 + -0.7 770,619 + -1.0 770,625 + -1.4 770,661 + -0.4 772,204 + -1.5 772,222 + -2.4 772,222 + -1.5
Or see this region's nucleotide sequence