Strain Fitness in Escherichia coli BW25113 around b0006

Experiment: 2,4-Dinitrophenol 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2,4-Dinitrophenol 2 mM
4,721	+	thrC	b0004	0.77	-0.1
4,729	+	thrC	b0004	0.77	-0.6
4,729	-	thrC	b0004	0.77	-0.4
4,729	-	thrC	b0004	0.77	+0.1
4,755	-	thrC	b0004	0.79	+1.4
4,755	-	thrC	b0004	0.79	+0.6
4,755	-	thrC	b0004	0.79	+0.3
4,771	+	thrC	b0004	0.81	-0.7
4,771	+	thrC	b0004	0.81	-1.6
4,779	-	thrC	b0004	0.81	-0.6
4,779	-	thrC	b0004	0.81	+0.4
4,796	+	thrC	b0004	0.83	-0.4
4,875	+	thrC	b0004	0.89	-1.4
4,932	+				+0.9
4,932	+				-0.6
4,993	+				-1.0
5,238	+				-0.2
5,241	+				-2.1
5,241	+				+0.6
5,273	+	yaaX	b0005	0.13	-1.0
5,273	+	yaaX	b0005	0.13	-0.1
5,280	-	yaaX	b0005	0.15	-0.5
5,283	+	yaaX	b0005	0.16	+0.5
5,285	+	yaaX	b0005	0.17	+0.1
5,358	-	yaaX	b0005	0.42	-0.2
5,470	+	yaaX	b0005	0.79	-0.5
5,470	+	yaaX	b0005	0.79	-0.4
5,639	-				-0.1
5,699	-				+0.8
5,699	-				+0.1
5,788	-	yaaA	b0006	0.14	+0.5
5,788	-	yaaA	b0006	0.14	-1.2
5,835	-	yaaA	b0006	0.20	-0.1
5,879	-	yaaA	b0006	0.25	-0.9
5,891	-	yaaA	b0006	0.27	-0.5
5,898	+	yaaA	b0006	0.28	+0.2
5,958	+	yaaA	b0006	0.35	-1.0
5,976	+	yaaA	b0006	0.38	+0.4
5,976	+	yaaA	b0006	0.38	-0.4
5,995	+	yaaA	b0006	0.40	-1.0
6,005	-	yaaA	b0006	0.41	-0.1
6,027	-	yaaA	b0006	0.44	+0.3
6,071	-	yaaA	b0006	0.50	+0.5
6,073	-	yaaA	b0006	0.50	-0.4
6,073	-	yaaA	b0006	0.50	-0.1
6,087	+	yaaA	b0006	0.52	+0.7
6,087	+	yaaA	b0006	0.52	-0.4
6,108	+	yaaA	b0006	0.55	+0.9
6,108	+	yaaA	b0006	0.55	+0.5
6,278	+	yaaA	b0006	0.77	-0.9
6,278	+	yaaA	b0006	0.77	-0.0
6,285	-	yaaA	b0006	0.77	+0.0
6,288	-	yaaA	b0006	0.78	-0.0
6,288	-	yaaA	b0006	0.78	-0.4
6,317	+	yaaA	b0006	0.82	+1.0
6,317	+	yaaA	b0006	0.82	+0.6
6,317	-	yaaA	b0006	0.82	+0.4
6,317	-	yaaA	b0006	0.82	+1.0
6,348	+	yaaA	b0006	0.86	-0.6
6,348	+	yaaA	b0006	0.86	-0.5
6,348	+	yaaA	b0006	0.86	+0.4
6,355	+	yaaA	b0006	0.86	+0.3
6,420	+				-0.2
6,456	+				+0.1
6,456	+				-0.4
6,550	-				+0.1
6,604	-				-0.0
6,604	-				+0.0
6,606	-				-0.1
6,683	-	yaaJ	b0007	0.11	-1.4
6,694	+	yaaJ	b0007	0.12	-0.3
6,747	+	yaaJ	b0007	0.15	-1.7
6,748	+	yaaJ	b0007	0.15	-0.7
6,756	-	yaaJ	b0007	0.16	-0.5
6,756	-	yaaJ	b0007	0.16	-0.0
6,815	-	yaaJ	b0007	0.20	-0.7
6,869	+	yaaJ	b0007	0.24	-0.7
6,910	+	yaaJ	b0007	0.27	-0.3
6,915	-	yaaJ	b0007	0.27	-0.9
6,929	+	yaaJ	b0007	0.28	-0.1
6,934	-	yaaJ	b0007	0.28	-0.3
6,976	+	yaaJ	b0007	0.31	+0.1
6,985	-	yaaJ	b0007	0.32	+0.8
7,196	+	yaaJ	b0007	0.47	-0.5
7,196	+	yaaJ	b0007	0.47	-0.2
7,203	-	yaaJ	b0007	0.47	-0.7
7,206	-	yaaJ	b0007	0.47	-0.4
7,213	+	yaaJ	b0007	0.48	+0.1
7,213	+	yaaJ	b0007	0.48	-0.7
7,230	+	yaaJ	b0007	0.49	-0.1
7,264	-	yaaJ	b0007	0.51	-0.2
7,264	-	yaaJ	b0007	0.51	-0.3
7,319	-	yaaJ	b0007	0.55	-1.3
7,342	+	yaaJ	b0007	0.57	-1.1
7,356	+	yaaJ	b0007	0.58	-0.2
7,356	+	yaaJ	b0007	0.58	-0.1
7,371	-	yaaJ	b0007	0.59	+0.5