Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1206

Experiment: marine_broth_2216 with Chloride 500 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_1205 and B158DRAFT_1206 are separated by 177 nucleotidesB158DRAFT_1206 and B158DRAFT_1207 are separated by 97 nucleotides B158DRAFT_1205: B158DRAFT_1205 - Uncharacterized protein conserved in bacteria, at 1,243,443 to 1,244,264 _1205 B158DRAFT_1206: B158DRAFT_1206 - Putative p-aminobenzoyl-glutamate transporter, at 1,244,442 to 1,245,989 _1206 B158DRAFT_1207: B158DRAFT_1207 - Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit, at 1,246,087 to 1,248,324 _1207 Position (kb) 1244 1245 1246Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1243.449 kb on - strandat 1243.449 kb on - strandat 1243.449 kb on - strandat 1243.449 kb on - strandat 1243.449 kb on - strandat 1243.449 kb on - strandat 1243.449 kb on - strandat 1243.449 kb on - strandat 1243.451 kb on + strandat 1243.459 kb on - strandat 1243.462 kb on + strandat 1243.470 kb on - strandat 1243.498 kb on + strandat 1243.498 kb on + strandat 1243.498 kb on + strandat 1243.506 kb on - strandat 1243.506 kb on - strandat 1243.506 kb on - strandat 1243.517 kb on + strandat 1243.604 kb on + strand, within B158DRAFT_1205at 1243.623 kb on - strand, within B158DRAFT_1205at 1243.671 kb on + strand, within B158DRAFT_1205at 1243.672 kb on - strand, within B158DRAFT_1205at 1243.679 kb on - strand, within B158DRAFT_1205at 1243.705 kb on + strand, within B158DRAFT_1205at 1243.722 kb on + strand, within B158DRAFT_1205at 1243.728 kb on - strand, within B158DRAFT_1205at 1243.755 kb on + strand, within B158DRAFT_1205at 1243.798 kb on + strand, within B158DRAFT_1205at 1243.798 kb on + strand, within B158DRAFT_1205at 1243.798 kb on + strand, within B158DRAFT_1205at 1243.806 kb on - strand, within B158DRAFT_1205at 1243.806 kb on - strand, within B158DRAFT_1205at 1243.919 kb on + strand, within B158DRAFT_1205at 1243.927 kb on - strand, within B158DRAFT_1205at 1243.927 kb on - strand, within B158DRAFT_1205at 1243.972 kb on + strand, within B158DRAFT_1205at 1243.972 kb on + strand, within B158DRAFT_1205at 1243.977 kb on + strand, within B158DRAFT_1205at 1243.977 kb on + strand, within B158DRAFT_1205at 1243.977 kb on + strand, within B158DRAFT_1205at 1243.978 kb on - strand, within B158DRAFT_1205at 1243.985 kb on - strand, within B158DRAFT_1205at 1243.985 kb on - strand, within B158DRAFT_1205at 1243.995 kb on + strand, within B158DRAFT_1205at 1244.016 kb on + strand, within B158DRAFT_1205at 1244.016 kb on + strand, within B158DRAFT_1205at 1244.016 kb on + strand, within B158DRAFT_1205at 1244.016 kb on + strand, within B158DRAFT_1205at 1244.016 kb on + strand, within B158DRAFT_1205at 1244.016 kb on + strand, within B158DRAFT_1205at 1244.016 kb on + strand, within B158DRAFT_1205at 1244.016 kb on + strand, within B158DRAFT_1205at 1244.016 kb on + strand, within B158DRAFT_1205at 1244.016 kb on + strand, within B158DRAFT_1205at 1244.024 kb on - strand, within B158DRAFT_1205at 1244.024 kb on - strand, within B158DRAFT_1205at 1244.024 kb on - strand, within B158DRAFT_1205at 1244.024 kb on - strand, within B158DRAFT_1205at 1244.024 kb on - strand, within B158DRAFT_1205at 1244.024 kb on - strand, within B158DRAFT_1205at 1244.024 kb on - strand, within B158DRAFT_1205at 1244.024 kb on - strand, within B158DRAFT_1205at 1244.024 kb on - strand, within B158DRAFT_1205at 1244.024 kb on - strand, within B158DRAFT_1205at 1244.024 kb on - strand, within B158DRAFT_1205at 1244.024 kb on - strand, within B158DRAFT_1205at 1244.093 kb on - strand, within B158DRAFT_1205at 1244.198 kb on + strandat 1244.198 kb on + strandat 1244.198 kb on + strandat 1244.198 kb on + strandat 1244.198 kb on + strandat 1244.198 kb on + strandat 1244.198 kb on + strandat 1244.206 kb on - strandat 1244.206 kb on - strandat 1244.206 kb on - strandat 1244.206 kb on - strandat 1244.206 kb on - strandat 1244.251 kb on - strandat 1244.267 kb on + strandat 1244.294 kb on + strandat 1244.302 kb on - strandat 1244.334 kb on - strandat 1244.351 kb on + strandat 1244.351 kb on + strandat 1244.351 kb on + strandat 1244.351 kb on + strandat 1244.359 kb on - strandat 1244.359 kb on - strandat 1244.359 kb on - strandat 1244.364 kb on + strandat 1244.364 kb on + strandat 1244.403 kb on + strandat 1244.411 kb on - strandat 1244.497 kb on + strandat 1244.556 kb on - strandat 1244.596 kb on + strandat 1244.604 kb on - strand, within B158DRAFT_1206at 1244.604 kb on - strand, within B158DRAFT_1206at 1244.604 kb on - strand, within B158DRAFT_1206at 1244.605 kb on + strand, within B158DRAFT_1206at 1244.645 kb on + strand, within B158DRAFT_1206at 1244.663 kb on - strand, within B158DRAFT_1206at 1244.696 kb on - strand, within B158DRAFT_1206at 1244.702 kb on - strand, within B158DRAFT_1206at 1244.712 kb on - strand, within B158DRAFT_1206at 1244.719 kb on + strand, within B158DRAFT_1206at 1244.719 kb on + strand, within B158DRAFT_1206at 1244.719 kb on + strand, within B158DRAFT_1206at 1244.720 kb on - strand, within B158DRAFT_1206at 1244.720 kb on - strand, within B158DRAFT_1206at 1244.727 kb on - strand, within B158DRAFT_1206at 1244.727 kb on - strand, within B158DRAFT_1206at 1244.727 kb on - strand, within B158DRAFT_1206at 1244.727 kb on - strand, within B158DRAFT_1206at 1244.727 kb on - strand, within B158DRAFT_1206at 1244.743 kb on + strand, within B158DRAFT_1206at 1244.744 kb on - strand, within B158DRAFT_1206at 1244.751 kb on - strand, within B158DRAFT_1206at 1244.900 kb on - strand, within B158DRAFT_1206at 1244.931 kb on - strand, within B158DRAFT_1206at 1244.960 kb on - strand, within B158DRAFT_1206at 1245.022 kb on + strand, within B158DRAFT_1206at 1245.022 kb on + strand, within B158DRAFT_1206at 1245.057 kb on + strand, within B158DRAFT_1206at 1245.065 kb on + strand, within B158DRAFT_1206at 1245.065 kb on + strand, within B158DRAFT_1206at 1245.065 kb on + strand, within B158DRAFT_1206at 1245.073 kb on - strand, within B158DRAFT_1206at 1245.116 kb on - strand, within B158DRAFT_1206at 1245.141 kb on + strand, within B158DRAFT_1206at 1245.159 kb on + strand, within B158DRAFT_1206at 1245.167 kb on - strand, within B158DRAFT_1206at 1245.279 kb on + strand, within B158DRAFT_1206at 1245.287 kb on - strand, within B158DRAFT_1206at 1245.359 kb on - strand, within B158DRAFT_1206at 1245.389 kb on + strand, within B158DRAFT_1206at 1245.472 kb on - strand, within B158DRAFT_1206at 1245.472 kb on - strand, within B158DRAFT_1206at 1245.486 kb on + strand, within B158DRAFT_1206at 1245.516 kb on + strand, within B158DRAFT_1206at 1245.516 kb on + strand, within B158DRAFT_1206at 1245.516 kb on + strand, within B158DRAFT_1206at 1245.516 kb on + strand, within B158DRAFT_1206at 1245.516 kb on + strand, within B158DRAFT_1206at 1245.516 kb on + strand, within B158DRAFT_1206at 1245.566 kb on + strand, within B158DRAFT_1206at 1245.574 kb on + strand, within B158DRAFT_1206at 1245.574 kb on + strand, within B158DRAFT_1206at 1245.584 kb on + strand, within B158DRAFT_1206at 1245.584 kb on - strand, within B158DRAFT_1206at 1245.654 kb on + strand, within B158DRAFT_1206at 1245.654 kb on - strand, within B158DRAFT_1206at 1245.782 kb on + strand, within B158DRAFT_1206at 1245.782 kb on + strand, within B158DRAFT_1206at 1245.838 kb on + strandat 1245.870 kb on + strandat 1245.870 kb on + strandat 1245.946 kb on - strandat 1246.018 kb on + strandat 1246.018 kb on + strandat 1246.088 kb on + strandat 1246.094 kb on + strandat 1246.094 kb on + strandat 1246.094 kb on + strandat 1246.094 kb on + strandat 1246.094 kb on + strandat 1246.096 kb on + strandat 1246.102 kb on - strandat 1246.102 kb on - strandat 1246.102 kb on - strandat 1246.102 kb on - strandat 1246.140 kb on - strandat 1246.150 kb on - strandat 1246.242 kb on + strandat 1246.250 kb on - strandat 1246.250 kb on - strandat 1246.250 kb on - strandat 1246.260 kb on - strandat 1246.262 kb on + strandat 1246.262 kb on + strandat 1246.270 kb on - strandat 1246.282 kb on + strandat 1246.302 kb on + strandat 1246.338 kb on + strand, within B158DRAFT_1207at 1246.338 kb on + strand, within B158DRAFT_1207at 1246.338 kb on + strand, within B158DRAFT_1207at 1246.346 kb on - strand, within B158DRAFT_1207at 1246.346 kb on - strand, within B158DRAFT_1207at 1246.346 kb on - strand, within B158DRAFT_1207at 1246.346 kb on - strand, within B158DRAFT_1207at 1246.415 kb on - strand, within B158DRAFT_1207at 1246.449 kb on + strand, within B158DRAFT_1207at 1246.492 kb on + strand, within B158DRAFT_1207at 1246.514 kb on - strand, within B158DRAFT_1207at 1246.519 kb on - strand, within B158DRAFT_1207at 1246.521 kb on + strand, within B158DRAFT_1207at 1246.529 kb on - strand, within B158DRAFT_1207at 1246.538 kb on - strand, within B158DRAFT_1207at 1246.649 kb on + strand, within B158DRAFT_1207at 1246.649 kb on - strand, within B158DRAFT_1207at 1246.701 kb on - strand, within B158DRAFT_1207at 1246.701 kb on - strand, within B158DRAFT_1207at 1246.701 kb on - strand, within B158DRAFT_1207at 1246.701 kb on - strand, within B158DRAFT_1207at 1246.733 kb on - strand, within B158DRAFT_1207at 1246.756 kb on + strand, within B158DRAFT_1207at 1246.771 kb on - strand, within B158DRAFT_1207at 1246.831 kb on + strand, within B158DRAFT_1207at 1246.850 kb on + strand, within B158DRAFT_1207at 1246.850 kb on + strand, within B158DRAFT_1207

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction marine_broth_2216 with Chloride 500 mM
remove
1,243,449 - +0.3
1,243,449 - +0.0
1,243,449 - +0.3
1,243,449 - +0.1
1,243,449 - -0.4
1,243,449 - -0.5
1,243,449 - +0.4
1,243,449 - -0.1
1,243,451 + +0.2
1,243,459 - -0.3
1,243,462 + -0.1
1,243,470 - -0.1
1,243,498 + -2.7
1,243,498 + -0.1
1,243,498 + -0.6
1,243,506 - +0.1
1,243,506 - -0.3
1,243,506 - +0.4
1,243,517 + -0.9
1,243,604 + B158DRAFT_1205 0.20 -0.1
1,243,623 - B158DRAFT_1205 0.22 -0.9
1,243,671 + B158DRAFT_1205 0.28 +0.9
1,243,672 - B158DRAFT_1205 0.28 +0.3
1,243,679 - B158DRAFT_1205 0.29 -0.1
1,243,705 + B158DRAFT_1205 0.32 +0.4
1,243,722 + B158DRAFT_1205 0.34 -0.1
1,243,728 - B158DRAFT_1205 0.35 -1.7
1,243,755 + B158DRAFT_1205 0.38 -1.1
1,243,798 + B158DRAFT_1205 0.43 +0.4
1,243,798 + B158DRAFT_1205 0.43 -0.3
1,243,798 + B158DRAFT_1205 0.43 -0.3
1,243,806 - B158DRAFT_1205 0.44 -0.7
1,243,806 - B158DRAFT_1205 0.44 -0.1
1,243,919 + B158DRAFT_1205 0.58 -0.2
1,243,927 - B158DRAFT_1205 0.59 -0.4
1,243,927 - B158DRAFT_1205 0.59 -0.6
1,243,972 + B158DRAFT_1205 0.64 +0.5
1,243,972 + B158DRAFT_1205 0.64 +0.2
1,243,977 + B158DRAFT_1205 0.65 +0.0
1,243,977 + B158DRAFT_1205 0.65 -0.7
1,243,977 + B158DRAFT_1205 0.65 -0.0
1,243,978 - B158DRAFT_1205 0.65 +1.8
1,243,985 - B158DRAFT_1205 0.66 -1.2
1,243,985 - B158DRAFT_1205 0.66 +0.3
1,243,995 + B158DRAFT_1205 0.67 -0.2
1,244,016 + B158DRAFT_1205 0.70 -0.4
1,244,016 + B158DRAFT_1205 0.70 +0.1
1,244,016 + B158DRAFT_1205 0.70 +0.3
1,244,016 + B158DRAFT_1205 0.70 -0.5
1,244,016 + B158DRAFT_1205 0.70 +0.8
1,244,016 + B158DRAFT_1205 0.70 -1.1
1,244,016 + B158DRAFT_1205 0.70 +0.9
1,244,016 + B158DRAFT_1205 0.70 +0.0
1,244,016 + B158DRAFT_1205 0.70 -0.4
1,244,016 + B158DRAFT_1205 0.70 -1.0
1,244,024 - B158DRAFT_1205 0.71 -0.3
1,244,024 - B158DRAFT_1205 0.71 -0.5
1,244,024 - B158DRAFT_1205 0.71 +0.3
1,244,024 - B158DRAFT_1205 0.71 -1.1
1,244,024 - B158DRAFT_1205 0.71 -0.2
1,244,024 - B158DRAFT_1205 0.71 -0.7
1,244,024 - B158DRAFT_1205 0.71 +0.2
1,244,024 - B158DRAFT_1205 0.71 +0.3
1,244,024 - B158DRAFT_1205 0.71 +0.0
1,244,024 - B158DRAFT_1205 0.71 -0.5
1,244,024 - B158DRAFT_1205 0.71 -0.8
1,244,024 - B158DRAFT_1205 0.71 -0.9
1,244,093 - B158DRAFT_1205 0.79 +0.0
1,244,198 + -0.0
1,244,198 + -1.5
1,244,198 + -0.2
1,244,198 + +0.2
1,244,198 + +2.1
1,244,198 + +0.1
1,244,198 + -0.1
1,244,206 - -1.1
1,244,206 - -0.9
1,244,206 - -0.5
1,244,206 - -0.2
1,244,206 - -0.3
1,244,251 - +0.0
1,244,267 + -0.2
1,244,294 + -0.3
1,244,302 - +0.2
1,244,334 - +1.0
1,244,351 + +0.6
1,244,351 + -0.2
1,244,351 + -0.0
1,244,351 + -0.4
1,244,359 - -0.0
1,244,359 - -0.0
1,244,359 - +0.6
1,244,364 + -2.8
1,244,364 + -0.3
1,244,403 + -0.4
1,244,411 - -0.4
1,244,497 + -0.4
1,244,556 - -0.4
1,244,596 + -0.2
1,244,604 - B158DRAFT_1206 0.10 -0.2
1,244,604 - B158DRAFT_1206 0.10 +0.4
1,244,604 - B158DRAFT_1206 0.10 +0.3
1,244,605 + B158DRAFT_1206 0.11 -0.0
1,244,645 + B158DRAFT_1206 0.13 +0.2
1,244,663 - B158DRAFT_1206 0.14 -0.1
1,244,696 - B158DRAFT_1206 0.16 +0.7
1,244,702 - B158DRAFT_1206 0.17 -0.0
1,244,712 - B158DRAFT_1206 0.17 +0.1
1,244,719 + B158DRAFT_1206 0.18 +0.0
1,244,719 + B158DRAFT_1206 0.18 -0.1
1,244,719 + B158DRAFT_1206 0.18 +0.1
1,244,720 - B158DRAFT_1206 0.18 +0.3
1,244,720 - B158DRAFT_1206 0.18 -0.7
1,244,727 - B158DRAFT_1206 0.18 -0.5
1,244,727 - B158DRAFT_1206 0.18 +1.9
1,244,727 - B158DRAFT_1206 0.18 +0.1
1,244,727 - B158DRAFT_1206 0.18 +0.2
1,244,727 - B158DRAFT_1206 0.18 +0.3
1,244,743 + B158DRAFT_1206 0.19 +0.1
1,244,744 - B158DRAFT_1206 0.20 -0.9
1,244,751 - B158DRAFT_1206 0.20 -0.1
1,244,900 - B158DRAFT_1206 0.30 +1.6
1,244,931 - B158DRAFT_1206 0.32 -0.5
1,244,960 - B158DRAFT_1206 0.33 +0.6
1,245,022 + B158DRAFT_1206 0.37 -0.4
1,245,022 + B158DRAFT_1206 0.37 +0.3
1,245,057 + B158DRAFT_1206 0.40 -0.7
1,245,065 + B158DRAFT_1206 0.40 +0.1
1,245,065 + B158DRAFT_1206 0.40 -0.3
1,245,065 + B158DRAFT_1206 0.40 +1.1
1,245,073 - B158DRAFT_1206 0.41 -0.6
1,245,116 - B158DRAFT_1206 0.44 +0.1
1,245,141 + B158DRAFT_1206 0.45 +0.2
1,245,159 + B158DRAFT_1206 0.46 -1.0
1,245,167 - B158DRAFT_1206 0.47 +0.0
1,245,279 + B158DRAFT_1206 0.54 +0.3
1,245,287 - B158DRAFT_1206 0.55 -2.1
1,245,359 - B158DRAFT_1206 0.59 -0.4
1,245,389 + B158DRAFT_1206 0.61 -0.1
1,245,472 - B158DRAFT_1206 0.67 +0.3
1,245,472 - B158DRAFT_1206 0.67 -1.3
1,245,486 + B158DRAFT_1206 0.67 -0.2
1,245,516 + B158DRAFT_1206 0.69 -0.2
1,245,516 + B158DRAFT_1206 0.69 -0.5
1,245,516 + B158DRAFT_1206 0.69 -0.7
1,245,516 + B158DRAFT_1206 0.69 +0.0
1,245,516 + B158DRAFT_1206 0.69 -0.5
1,245,516 + B158DRAFT_1206 0.69 +0.1
1,245,566 + B158DRAFT_1206 0.73 -0.1
1,245,574 + B158DRAFT_1206 0.73 -0.0
1,245,574 + B158DRAFT_1206 0.73 -0.9
1,245,584 + B158DRAFT_1206 0.74 -0.5
1,245,584 - B158DRAFT_1206 0.74 -0.3
1,245,654 + B158DRAFT_1206 0.78 -0.3
1,245,654 - B158DRAFT_1206 0.78 -0.2
1,245,782 + B158DRAFT_1206 0.87 -0.5
1,245,782 + B158DRAFT_1206 0.87 -0.0
1,245,838 + +0.6
1,245,870 + +0.1
1,245,870 + -0.6
1,245,946 - -1.7
1,246,018 + +0.1
1,246,018 + +0.2
1,246,088 + +0.3
1,246,094 + -0.2
1,246,094 + -0.4
1,246,094 + -1.5
1,246,094 + +0.4
1,246,094 + -0.1
1,246,096 + -0.6
1,246,102 - +0.2
1,246,102 - -0.0
1,246,102 - -0.2
1,246,102 - -0.0
1,246,140 - -1.9
1,246,150 - -0.7
1,246,242 + +0.5
1,246,250 - -0.7
1,246,250 - -1.1
1,246,250 - -0.3
1,246,260 - -0.2
1,246,262 + +0.6
1,246,262 + +0.2
1,246,270 - +1.1
1,246,282 + +0.0
1,246,302 + -0.4
1,246,338 + B158DRAFT_1207 0.11 +0.0
1,246,338 + B158DRAFT_1207 0.11 -0.0
1,246,338 + B158DRAFT_1207 0.11 +0.1
1,246,346 - B158DRAFT_1207 0.12 -0.1
1,246,346 - B158DRAFT_1207 0.12 +0.2
1,246,346 - B158DRAFT_1207 0.12 +0.2
1,246,346 - B158DRAFT_1207 0.12 +0.3
1,246,415 - B158DRAFT_1207 0.15 -0.1
1,246,449 + B158DRAFT_1207 0.16 -0.0
1,246,492 + B158DRAFT_1207 0.18 +0.2
1,246,514 - B158DRAFT_1207 0.19 -0.1
1,246,519 - B158DRAFT_1207 0.19 -1.2
1,246,521 + B158DRAFT_1207 0.19 -0.3
1,246,529 - B158DRAFT_1207 0.20 -0.0
1,246,538 - B158DRAFT_1207 0.20 +0.5
1,246,649 + B158DRAFT_1207 0.25 +0.5
1,246,649 - B158DRAFT_1207 0.25 -0.1
1,246,701 - B158DRAFT_1207 0.27 +0.2
1,246,701 - B158DRAFT_1207 0.27 -1.2
1,246,701 - B158DRAFT_1207 0.27 +0.0
1,246,701 - B158DRAFT_1207 0.27 -0.1
1,246,733 - B158DRAFT_1207 0.29 -0.9
1,246,756 + B158DRAFT_1207 0.30 -0.1
1,246,771 - B158DRAFT_1207 0.31 -1.9
1,246,831 + B158DRAFT_1207 0.33 +0.9
1,246,850 + B158DRAFT_1207 0.34 -0.8
1,246,850 + B158DRAFT_1207 0.34 -1.4

Or see this region's nucleotide sequence