Experiment: marine_broth_2216 with Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1205 and B158DRAFT_1206 are separated by 177 nucleotides B158DRAFT_1206 and B158DRAFT_1207 are separated by 97 nucleotides
B158DRAFT_1205: B158DRAFT_1205 - Uncharacterized protein conserved in bacteria, at 1,243,443 to 1,244,264
_1205
B158DRAFT_1206: B158DRAFT_1206 - Putative p-aminobenzoyl-glutamate transporter, at 1,244,442 to 1,245,989
_1206
B158DRAFT_1207: B158DRAFT_1207 - Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit, at 1,246,087 to 1,248,324
_1207
Position (kb)
1244
1245
1246 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1243.449 kb on - strand at 1243.449 kb on - strand at 1243.449 kb on - strand at 1243.449 kb on - strand at 1243.449 kb on - strand at 1243.449 kb on - strand at 1243.449 kb on - strand at 1243.449 kb on - strand at 1243.451 kb on + strand at 1243.459 kb on - strand at 1243.462 kb on + strand at 1243.470 kb on - strand at 1243.498 kb on + strand at 1243.498 kb on + strand at 1243.498 kb on + strand at 1243.506 kb on - strand at 1243.506 kb on - strand at 1243.506 kb on - strand at 1243.517 kb on + strand at 1243.604 kb on + strand, within B158DRAFT_1205 at 1243.623 kb on - strand, within B158DRAFT_1205 at 1243.671 kb on + strand, within B158DRAFT_1205 at 1243.672 kb on - strand, within B158DRAFT_1205 at 1243.679 kb on - strand, within B158DRAFT_1205 at 1243.705 kb on + strand, within B158DRAFT_1205 at 1243.722 kb on + strand, within B158DRAFT_1205 at 1243.728 kb on - strand, within B158DRAFT_1205 at 1243.755 kb on + strand, within B158DRAFT_1205 at 1243.798 kb on + strand, within B158DRAFT_1205 at 1243.798 kb on + strand, within B158DRAFT_1205 at 1243.798 kb on + strand, within B158DRAFT_1205 at 1243.806 kb on - strand, within B158DRAFT_1205 at 1243.806 kb on - strand, within B158DRAFT_1205 at 1243.919 kb on + strand, within B158DRAFT_1205 at 1243.927 kb on - strand, within B158DRAFT_1205 at 1243.927 kb on - strand, within B158DRAFT_1205 at 1243.972 kb on + strand, within B158DRAFT_1205 at 1243.972 kb on + strand, within B158DRAFT_1205 at 1243.977 kb on + strand, within B158DRAFT_1205 at 1243.977 kb on + strand, within B158DRAFT_1205 at 1243.977 kb on + strand, within B158DRAFT_1205 at 1243.978 kb on - strand, within B158DRAFT_1205 at 1243.985 kb on - strand, within B158DRAFT_1205 at 1243.985 kb on - strand, within B158DRAFT_1205 at 1243.995 kb on + strand, within B158DRAFT_1205 at 1244.016 kb on + strand, within B158DRAFT_1205 at 1244.016 kb on + strand, within B158DRAFT_1205 at 1244.016 kb on + strand, within B158DRAFT_1205 at 1244.016 kb on + strand, within B158DRAFT_1205 at 1244.016 kb on + strand, within B158DRAFT_1205 at 1244.016 kb on + strand, within B158DRAFT_1205 at 1244.016 kb on + strand, within B158DRAFT_1205 at 1244.016 kb on + strand, within B158DRAFT_1205 at 1244.016 kb on + strand, within B158DRAFT_1205 at 1244.016 kb on + strand, within B158DRAFT_1205 at 1244.024 kb on - strand, within B158DRAFT_1205 at 1244.024 kb on - strand, within B158DRAFT_1205 at 1244.024 kb on - strand, within B158DRAFT_1205 at 1244.024 kb on - strand, within B158DRAFT_1205 at 1244.024 kb on - strand, within B158DRAFT_1205 at 1244.024 kb on - strand, within B158DRAFT_1205 at 1244.024 kb on - strand, within B158DRAFT_1205 at 1244.024 kb on - strand, within B158DRAFT_1205 at 1244.024 kb on - strand, within B158DRAFT_1205 at 1244.024 kb on - strand, within B158DRAFT_1205 at 1244.024 kb on - strand, within B158DRAFT_1205 at 1244.024 kb on - strand, within B158DRAFT_1205 at 1244.093 kb on - strand, within B158DRAFT_1205 at 1244.198 kb on + strand at 1244.198 kb on + strand at 1244.198 kb on + strand at 1244.198 kb on + strand at 1244.198 kb on + strand at 1244.198 kb on + strand at 1244.198 kb on + strand at 1244.206 kb on - strand at 1244.206 kb on - strand at 1244.206 kb on - strand at 1244.206 kb on - strand at 1244.206 kb on - strand at 1244.251 kb on - strand at 1244.267 kb on + strand at 1244.294 kb on + strand at 1244.302 kb on - strand at 1244.334 kb on - strand at 1244.351 kb on + strand at 1244.351 kb on + strand at 1244.351 kb on + strand at 1244.351 kb on + strand at 1244.359 kb on - strand at 1244.359 kb on - strand at 1244.359 kb on - strand at 1244.364 kb on + strand at 1244.364 kb on + strand at 1244.403 kb on + strand at 1244.411 kb on - strand at 1244.497 kb on + strand at 1244.556 kb on - strand at 1244.596 kb on + strand at 1244.604 kb on - strand, within B158DRAFT_1206 at 1244.604 kb on - strand, within B158DRAFT_1206 at 1244.604 kb on - strand, within B158DRAFT_1206 at 1244.605 kb on + strand, within B158DRAFT_1206 at 1244.645 kb on + strand, within B158DRAFT_1206 at 1244.663 kb on - strand, within B158DRAFT_1206 at 1244.696 kb on - strand, within B158DRAFT_1206 at 1244.702 kb on - strand, within B158DRAFT_1206 at 1244.712 kb on - strand, within B158DRAFT_1206 at 1244.719 kb on + strand, within B158DRAFT_1206 at 1244.719 kb on + strand, within B158DRAFT_1206 at 1244.719 kb on + strand, within B158DRAFT_1206 at 1244.720 kb on - strand, within B158DRAFT_1206 at 1244.720 kb on - strand, within B158DRAFT_1206 at 1244.727 kb on - strand, within B158DRAFT_1206 at 1244.727 kb on - strand, within B158DRAFT_1206 at 1244.727 kb on - strand, within B158DRAFT_1206 at 1244.727 kb on - strand, within B158DRAFT_1206 at 1244.727 kb on - strand, within B158DRAFT_1206 at 1244.743 kb on + strand, within B158DRAFT_1206 at 1244.744 kb on - strand, within B158DRAFT_1206 at 1244.751 kb on - strand, within B158DRAFT_1206 at 1244.900 kb on - strand, within B158DRAFT_1206 at 1244.931 kb on - strand, within B158DRAFT_1206 at 1244.960 kb on - strand, within B158DRAFT_1206 at 1245.022 kb on + strand, within B158DRAFT_1206 at 1245.022 kb on + strand, within B158DRAFT_1206 at 1245.057 kb on + strand, within B158DRAFT_1206 at 1245.065 kb on + strand, within B158DRAFT_1206 at 1245.065 kb on + strand, within B158DRAFT_1206 at 1245.065 kb on + strand, within B158DRAFT_1206 at 1245.073 kb on - strand, within B158DRAFT_1206 at 1245.116 kb on - strand, within B158DRAFT_1206 at 1245.141 kb on + strand, within B158DRAFT_1206 at 1245.159 kb on + strand, within B158DRAFT_1206 at 1245.167 kb on - strand, within B158DRAFT_1206 at 1245.279 kb on + strand, within B158DRAFT_1206 at 1245.287 kb on - strand, within B158DRAFT_1206 at 1245.359 kb on - strand, within B158DRAFT_1206 at 1245.389 kb on + strand, within B158DRAFT_1206 at 1245.472 kb on - strand, within B158DRAFT_1206 at 1245.472 kb on - strand, within B158DRAFT_1206 at 1245.486 kb on + strand, within B158DRAFT_1206 at 1245.516 kb on + strand, within B158DRAFT_1206 at 1245.516 kb on + strand, within B158DRAFT_1206 at 1245.516 kb on + strand, within B158DRAFT_1206 at 1245.516 kb on + strand, within B158DRAFT_1206 at 1245.516 kb on + strand, within B158DRAFT_1206 at 1245.516 kb on + strand, within B158DRAFT_1206 at 1245.566 kb on + strand, within B158DRAFT_1206 at 1245.574 kb on + strand, within B158DRAFT_1206 at 1245.574 kb on + strand, within B158DRAFT_1206 at 1245.584 kb on + strand, within B158DRAFT_1206 at 1245.584 kb on - strand, within B158DRAFT_1206 at 1245.654 kb on + strand, within B158DRAFT_1206 at 1245.654 kb on - strand, within B158DRAFT_1206 at 1245.782 kb on + strand, within B158DRAFT_1206 at 1245.782 kb on + strand, within B158DRAFT_1206 at 1245.838 kb on + strand at 1245.870 kb on + strand at 1245.870 kb on + strand at 1245.946 kb on - strand at 1246.018 kb on + strand at 1246.018 kb on + strand at 1246.088 kb on + strand at 1246.094 kb on + strand at 1246.094 kb on + strand at 1246.094 kb on + strand at 1246.094 kb on + strand at 1246.094 kb on + strand at 1246.096 kb on + strand at 1246.102 kb on - strand at 1246.102 kb on - strand at 1246.102 kb on - strand at 1246.102 kb on - strand at 1246.140 kb on - strand at 1246.150 kb on - strand at 1246.242 kb on + strand at 1246.250 kb on - strand at 1246.250 kb on - strand at 1246.250 kb on - strand at 1246.260 kb on - strand at 1246.262 kb on + strand at 1246.262 kb on + strand at 1246.270 kb on - strand at 1246.282 kb on + strand at 1246.302 kb on + strand at 1246.338 kb on + strand, within B158DRAFT_1207 at 1246.338 kb on + strand, within B158DRAFT_1207 at 1246.338 kb on + strand, within B158DRAFT_1207 at 1246.346 kb on - strand, within B158DRAFT_1207 at 1246.346 kb on - strand, within B158DRAFT_1207 at 1246.346 kb on - strand, within B158DRAFT_1207 at 1246.346 kb on - strand, within B158DRAFT_1207 at 1246.415 kb on - strand, within B158DRAFT_1207 at 1246.449 kb on + strand, within B158DRAFT_1207 at 1246.492 kb on + strand, within B158DRAFT_1207 at 1246.514 kb on - strand, within B158DRAFT_1207 at 1246.519 kb on - strand, within B158DRAFT_1207 at 1246.521 kb on + strand, within B158DRAFT_1207 at 1246.529 kb on - strand, within B158DRAFT_1207 at 1246.538 kb on - strand, within B158DRAFT_1207 at 1246.649 kb on + strand, within B158DRAFT_1207 at 1246.649 kb on - strand, within B158DRAFT_1207 at 1246.701 kb on - strand, within B158DRAFT_1207 at 1246.701 kb on - strand, within B158DRAFT_1207 at 1246.701 kb on - strand, within B158DRAFT_1207 at 1246.701 kb on - strand, within B158DRAFT_1207 at 1246.733 kb on - strand, within B158DRAFT_1207 at 1246.756 kb on + strand, within B158DRAFT_1207 at 1246.771 kb on - strand, within B158DRAFT_1207 at 1246.831 kb on + strand, within B158DRAFT_1207 at 1246.850 kb on + strand, within B158DRAFT_1207 at 1246.850 kb on + strand, within B158DRAFT_1207
Per-strain Table
Position Strand Gene LocusTag Fraction marine_broth_2216 with Chloride 500 mM remove 1,243,449 - +0.3 1,243,449 - +0.0 1,243,449 - +0.3 1,243,449 - +0.1 1,243,449 - -0.4 1,243,449 - -0.5 1,243,449 - +0.4 1,243,449 - -0.1 1,243,451 + +0.2 1,243,459 - -0.3 1,243,462 + -0.1 1,243,470 - -0.1 1,243,498 + -2.7 1,243,498 + -0.1 1,243,498 + -0.6 1,243,506 - +0.1 1,243,506 - -0.3 1,243,506 - +0.4 1,243,517 + -0.9 1,243,604 + B158DRAFT_1205 0.20 -0.1 1,243,623 - B158DRAFT_1205 0.22 -0.9 1,243,671 + B158DRAFT_1205 0.28 +0.9 1,243,672 - B158DRAFT_1205 0.28 +0.3 1,243,679 - B158DRAFT_1205 0.29 -0.1 1,243,705 + B158DRAFT_1205 0.32 +0.4 1,243,722 + B158DRAFT_1205 0.34 -0.1 1,243,728 - B158DRAFT_1205 0.35 -1.7 1,243,755 + B158DRAFT_1205 0.38 -1.1 1,243,798 + B158DRAFT_1205 0.43 +0.4 1,243,798 + B158DRAFT_1205 0.43 -0.3 1,243,798 + B158DRAFT_1205 0.43 -0.3 1,243,806 - B158DRAFT_1205 0.44 -0.7 1,243,806 - B158DRAFT_1205 0.44 -0.1 1,243,919 + B158DRAFT_1205 0.58 -0.2 1,243,927 - B158DRAFT_1205 0.59 -0.4 1,243,927 - B158DRAFT_1205 0.59 -0.6 1,243,972 + B158DRAFT_1205 0.64 +0.5 1,243,972 + B158DRAFT_1205 0.64 +0.2 1,243,977 + B158DRAFT_1205 0.65 +0.0 1,243,977 + B158DRAFT_1205 0.65 -0.7 1,243,977 + B158DRAFT_1205 0.65 -0.0 1,243,978 - B158DRAFT_1205 0.65 +1.8 1,243,985 - B158DRAFT_1205 0.66 -1.2 1,243,985 - B158DRAFT_1205 0.66 +0.3 1,243,995 + B158DRAFT_1205 0.67 -0.2 1,244,016 + B158DRAFT_1205 0.70 -0.4 1,244,016 + B158DRAFT_1205 0.70 +0.1 1,244,016 + B158DRAFT_1205 0.70 +0.3 1,244,016 + B158DRAFT_1205 0.70 -0.5 1,244,016 + B158DRAFT_1205 0.70 +0.8 1,244,016 + B158DRAFT_1205 0.70 -1.1 1,244,016 + B158DRAFT_1205 0.70 +0.9 1,244,016 + B158DRAFT_1205 0.70 +0.0 1,244,016 + B158DRAFT_1205 0.70 -0.4 1,244,016 + B158DRAFT_1205 0.70 -1.0 1,244,024 - B158DRAFT_1205 0.71 -0.3 1,244,024 - B158DRAFT_1205 0.71 -0.5 1,244,024 - B158DRAFT_1205 0.71 +0.3 1,244,024 - B158DRAFT_1205 0.71 -1.1 1,244,024 - B158DRAFT_1205 0.71 -0.2 1,244,024 - B158DRAFT_1205 0.71 -0.7 1,244,024 - B158DRAFT_1205 0.71 +0.2 1,244,024 - B158DRAFT_1205 0.71 +0.3 1,244,024 - B158DRAFT_1205 0.71 +0.0 1,244,024 - B158DRAFT_1205 0.71 -0.5 1,244,024 - B158DRAFT_1205 0.71 -0.8 1,244,024 - B158DRAFT_1205 0.71 -0.9 1,244,093 - B158DRAFT_1205 0.79 +0.0 1,244,198 + -0.0 1,244,198 + -1.5 1,244,198 + -0.2 1,244,198 + +0.2 1,244,198 + +2.1 1,244,198 + +0.1 1,244,198 + -0.1 1,244,206 - -1.1 1,244,206 - -0.9 1,244,206 - -0.5 1,244,206 - -0.2 1,244,206 - -0.3 1,244,251 - +0.0 1,244,267 + -0.2 1,244,294 + -0.3 1,244,302 - +0.2 1,244,334 - +1.0 1,244,351 + +0.6 1,244,351 + -0.2 1,244,351 + -0.0 1,244,351 + -0.4 1,244,359 - -0.0 1,244,359 - -0.0 1,244,359 - +0.6 1,244,364 + -2.8 1,244,364 + -0.3 1,244,403 + -0.4 1,244,411 - -0.4 1,244,497 + -0.4 1,244,556 - -0.4 1,244,596 + -0.2 1,244,604 - B158DRAFT_1206 0.10 -0.2 1,244,604 - B158DRAFT_1206 0.10 +0.4 1,244,604 - B158DRAFT_1206 0.10 +0.3 1,244,605 + B158DRAFT_1206 0.11 -0.0 1,244,645 + B158DRAFT_1206 0.13 +0.2 1,244,663 - B158DRAFT_1206 0.14 -0.1 1,244,696 - B158DRAFT_1206 0.16 +0.7 1,244,702 - B158DRAFT_1206 0.17 -0.0 1,244,712 - B158DRAFT_1206 0.17 +0.1 1,244,719 + B158DRAFT_1206 0.18 +0.0 1,244,719 + B158DRAFT_1206 0.18 -0.1 1,244,719 + B158DRAFT_1206 0.18 +0.1 1,244,720 - B158DRAFT_1206 0.18 +0.3 1,244,720 - B158DRAFT_1206 0.18 -0.7 1,244,727 - B158DRAFT_1206 0.18 -0.5 1,244,727 - B158DRAFT_1206 0.18 +1.9 1,244,727 - B158DRAFT_1206 0.18 +0.1 1,244,727 - B158DRAFT_1206 0.18 +0.2 1,244,727 - B158DRAFT_1206 0.18 +0.3 1,244,743 + B158DRAFT_1206 0.19 +0.1 1,244,744 - B158DRAFT_1206 0.20 -0.9 1,244,751 - B158DRAFT_1206 0.20 -0.1 1,244,900 - B158DRAFT_1206 0.30 +1.6 1,244,931 - B158DRAFT_1206 0.32 -0.5 1,244,960 - B158DRAFT_1206 0.33 +0.6 1,245,022 + B158DRAFT_1206 0.37 -0.4 1,245,022 + B158DRAFT_1206 0.37 +0.3 1,245,057 + B158DRAFT_1206 0.40 -0.7 1,245,065 + B158DRAFT_1206 0.40 +0.1 1,245,065 + B158DRAFT_1206 0.40 -0.3 1,245,065 + B158DRAFT_1206 0.40 +1.1 1,245,073 - B158DRAFT_1206 0.41 -0.6 1,245,116 - B158DRAFT_1206 0.44 +0.1 1,245,141 + B158DRAFT_1206 0.45 +0.2 1,245,159 + B158DRAFT_1206 0.46 -1.0 1,245,167 - B158DRAFT_1206 0.47 +0.0 1,245,279 + B158DRAFT_1206 0.54 +0.3 1,245,287 - B158DRAFT_1206 0.55 -2.1 1,245,359 - B158DRAFT_1206 0.59 -0.4 1,245,389 + B158DRAFT_1206 0.61 -0.1 1,245,472 - B158DRAFT_1206 0.67 +0.3 1,245,472 - B158DRAFT_1206 0.67 -1.3 1,245,486 + B158DRAFT_1206 0.67 -0.2 1,245,516 + B158DRAFT_1206 0.69 -0.2 1,245,516 + B158DRAFT_1206 0.69 -0.5 1,245,516 + B158DRAFT_1206 0.69 -0.7 1,245,516 + B158DRAFT_1206 0.69 +0.0 1,245,516 + B158DRAFT_1206 0.69 -0.5 1,245,516 + B158DRAFT_1206 0.69 +0.1 1,245,566 + B158DRAFT_1206 0.73 -0.1 1,245,574 + B158DRAFT_1206 0.73 -0.0 1,245,574 + B158DRAFT_1206 0.73 -0.9 1,245,584 + B158DRAFT_1206 0.74 -0.5 1,245,584 - B158DRAFT_1206 0.74 -0.3 1,245,654 + B158DRAFT_1206 0.78 -0.3 1,245,654 - B158DRAFT_1206 0.78 -0.2 1,245,782 + B158DRAFT_1206 0.87 -0.5 1,245,782 + B158DRAFT_1206 0.87 -0.0 1,245,838 + +0.6 1,245,870 + +0.1 1,245,870 + -0.6 1,245,946 - -1.7 1,246,018 + +0.1 1,246,018 + +0.2 1,246,088 + +0.3 1,246,094 + -0.2 1,246,094 + -0.4 1,246,094 + -1.5 1,246,094 + +0.4 1,246,094 + -0.1 1,246,096 + -0.6 1,246,102 - +0.2 1,246,102 - -0.0 1,246,102 - -0.2 1,246,102 - -0.0 1,246,140 - -1.9 1,246,150 - -0.7 1,246,242 + +0.5 1,246,250 - -0.7 1,246,250 - -1.1 1,246,250 - -0.3 1,246,260 - -0.2 1,246,262 + +0.6 1,246,262 + +0.2 1,246,270 - +1.1 1,246,282 + +0.0 1,246,302 + -0.4 1,246,338 + B158DRAFT_1207 0.11 +0.0 1,246,338 + B158DRAFT_1207 0.11 -0.0 1,246,338 + B158DRAFT_1207 0.11 +0.1 1,246,346 - B158DRAFT_1207 0.12 -0.1 1,246,346 - B158DRAFT_1207 0.12 +0.2 1,246,346 - B158DRAFT_1207 0.12 +0.2 1,246,346 - B158DRAFT_1207 0.12 +0.3 1,246,415 - B158DRAFT_1207 0.15 -0.1 1,246,449 + B158DRAFT_1207 0.16 -0.0 1,246,492 + B158DRAFT_1207 0.18 +0.2 1,246,514 - B158DRAFT_1207 0.19 -0.1 1,246,519 - B158DRAFT_1207 0.19 -1.2 1,246,521 + B158DRAFT_1207 0.19 -0.3 1,246,529 - B158DRAFT_1207 0.20 -0.0 1,246,538 - B158DRAFT_1207 0.20 +0.5 1,246,649 + B158DRAFT_1207 0.25 +0.5 1,246,649 - B158DRAFT_1207 0.25 -0.1 1,246,701 - B158DRAFT_1207 0.27 +0.2 1,246,701 - B158DRAFT_1207 0.27 -1.2 1,246,701 - B158DRAFT_1207 0.27 +0.0 1,246,701 - B158DRAFT_1207 0.27 -0.1 1,246,733 - B158DRAFT_1207 0.29 -0.9 1,246,756 + B158DRAFT_1207 0.30 -0.1 1,246,771 - B158DRAFT_1207 0.31 -1.9 1,246,831 + B158DRAFT_1207 0.33 +0.9 1,246,850 + B158DRAFT_1207 0.34 -0.8 1,246,850 + B158DRAFT_1207 0.34 -1.4
Or see this region's nucleotide sequence