Strain Fitness in Escherichia coli BW25113 around b3054

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,196,922	-	glnE	b3053	0.74	-0.0
3,196,996	-	glnE	b3053	0.76	+0.5
3,196,997	-	glnE	b3053	0.77	+1.0
3,196,997	-	glnE	b3053	0.77	+0.8
3,197,014	-	glnE	b3053	0.77	+1.1
3,197,095	+	glnE	b3053	0.80	+0.3
3,197,196	-	glnE	b3053	0.84	+0.3
3,197,317	+	glnE	b3053	0.88	+0.0
3,197,317	+	glnE	b3053	0.88	+0.8
3,197,354	-	glnE	b3053	0.89	+0.4
3,197,354	-	glnE	b3053	0.89	+0.1
3,197,366	+	glnE	b3053	0.90	+0.0
3,197,369	+	glnE	b3053	0.90	-0.4
3,197,369	+	glnE	b3053	0.90	-2.2
3,197,397	-				+0.4
3,197,397	-				+0.4
3,197,441	+				-1.2
3,197,515	+				-0.3
3,197,532	+				+0.7
3,197,540	-				+0.4
3,197,558	+				-0.0
3,197,558	+				+0.6
3,197,558	+				-0.0
3,197,600	+				+0.2
3,197,677	-				+0.6
3,197,701	+				+0.8
3,197,701	+				+0.9
3,197,701	+				+1.0
3,197,777	+				+0.5
3,197,780	-				+0.6
3,197,782	+				+0.3
3,197,820	+	ygiF	b3054	0.10	-1.1
3,197,834	-	ygiF	b3054	0.11	+0.1
3,197,899	-	ygiF	b3054	0.16	+0.6
3,197,899	-	ygiF	b3054	0.16	+0.8
3,197,903	+	ygiF	b3054	0.17	+1.2
3,197,999	+	ygiF	b3054	0.24	+0.2
3,197,999	+	ygiF	b3054	0.24	+0.9
3,198,040	-	ygiF	b3054	0.27	-0.9
3,198,113	+	ygiF	b3054	0.33	+1.0
3,198,113	-	ygiF	b3054	0.33	-0.3
3,198,113	-	ygiF	b3054	0.33	-0.1
3,198,126	+	ygiF	b3054	0.34	+0.1
3,198,130	-	ygiF	b3054	0.34	+0.8
3,198,151	-	ygiF	b3054	0.36	-0.2
3,198,151	-	ygiF	b3054	0.36	-0.3
3,198,174	+	ygiF	b3054	0.37	+0.1
3,198,282	-	ygiF	b3054	0.46	+0.3
3,198,321	+	ygiF	b3054	0.49	-0.4
3,198,393	-	ygiF	b3054	0.54	+0.4
3,198,393	-	ygiF	b3054	0.54	+0.2
3,198,398	-	ygiF	b3054	0.55	+1.0
3,198,398	-	ygiF	b3054	0.55	-0.6
3,198,491	+	ygiF	b3054	0.62	+0.2
3,198,552	+	ygiF	b3054	0.67	+1.0
3,198,560	-	ygiF	b3054	0.67	-0.1
3,198,561	-	ygiF	b3054	0.67	+0.6
3,198,561	-	ygiF	b3054	0.67	-1.2
3,198,711	+	ygiF	b3054	0.79	-0.9
3,198,733	+	ygiF	b3054	0.80	+0.3
3,198,733	+	ygiF	b3054	0.80	+0.2
3,198,750	+	ygiF	b3054	0.82	-0.7
3,198,750	+	ygiF	b3054	0.82	+0.3
3,198,758	-	ygiF	b3054	0.82	-0.0
3,198,824	-	ygiF	b3054	0.87	-0.3
3,198,824	-	ygiF	b3054	0.87	-0.1
3,198,828	-	ygiF	b3054	0.88	-0.2
3,198,898	-				-0.2
3,198,900	-				+0.3
3,198,919	+				+0.9
3,198,991	-				+0.6
3,198,998	+				+0.4
3,198,998	+				+0.7
3,199,136	+				+1.1
3,199,139	-				+0.9
3,199,175	-				-0.2
3,199,180	+				+0.3
3,199,214	+				+1.8
3,199,274	-				+0.4
3,199,310	+	htrG	b3055	0.13	+0.9
3,199,327	-	htrG	b3055	0.16	-0.2
3,199,446	+	htrG	b3055	0.35	+0.0
3,199,446	+	htrG	b3055	0.35	-1.3
3,199,480	+	htrG	b3055	0.40	+0.6
3,199,480	+	htrG	b3055	0.40	+0.7
3,199,488	-	htrG	b3055	0.42	+0.1
3,199,578	-	htrG	b3055	0.56	+0.1
3,199,716	+	htrG	b3055	0.78	+0.2
3,199,716	+	htrG	b3055	0.78	-0.1
3,199,716	+	htrG	b3055	0.78	+0.5
3,199,716	+	htrG	b3055	0.78	-0.2
3,199,721	+	htrG	b3055	0.79	-1.1
3,199,721	+	htrG	b3055	0.79	-0.7
3,199,724	+	htrG	b3055	0.80	-0.7
3,199,724	+	htrG	b3055	0.80	-0.5
3,199,747	-	htrG	b3055	0.83	-0.3
3,199,759	-	htrG	b3055	0.85	-0.5
3,199,759	-	htrG	b3055	0.85	+0.4
3,199,771	-	htrG	b3055	0.87	+1.0
3,199,771	-	htrG	b3055	0.87	+0.9
3,199,778	+	htrG	b3055	0.88	+0.6
3,199,781	+	htrG	b3055	0.89	-0.8
3,199,781	+	htrG	b3055	0.89	-0.5
3,199,878	-				+0.4