Experiment: marine_broth_2216 with Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14155 and CA264_14160 are separated by 407 nucleotides CA264_14160 and CA264_14165 are separated by 67 nucleotides
CA264_14155: CA264_14155 - hypothetical protein, at 3,323,143 to 3,324,399
_14155
CA264_14160: CA264_14160 - HupE / UreJ protein, at 3,324,807 to 3,325,400
_14160
CA264_14165: CA264_14165 - aminopeptidase, at 3,325,468 to 3,327,792
_14165
Position (kb)
3324
3325
3326 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3323.867 kb on + strand, within CA264_14155 at 3323.906 kb on + strand, within CA264_14155 at 3323.906 kb on + strand, within CA264_14155 at 3323.907 kb on - strand, within CA264_14155 at 3323.907 kb on - strand, within CA264_14155 at 3323.950 kb on + strand, within CA264_14155 at 3323.950 kb on + strand, within CA264_14155 at 3323.951 kb on - strand, within CA264_14155 at 3324.011 kb on + strand, within CA264_14155 at 3324.035 kb on + strand, within CA264_14155 at 3324.035 kb on + strand, within CA264_14155 at 3324.036 kb on - strand, within CA264_14155 at 3324.036 kb on - strand, within CA264_14155 at 3324.147 kb on + strand, within CA264_14155 at 3324.148 kb on - strand, within CA264_14155 at 3324.148 kb on - strand, within CA264_14155 at 3324.171 kb on - strand, within CA264_14155 at 3324.171 kb on - strand, within CA264_14155 at 3324.171 kb on - strand, within CA264_14155 at 3324.182 kb on + strand, within CA264_14155 at 3324.183 kb on - strand, within CA264_14155 at 3324.183 kb on - strand, within CA264_14155 at 3324.183 kb on - strand, within CA264_14155 at 3324.217 kb on + strand, within CA264_14155 at 3324.253 kb on - strand, within CA264_14155 at 3324.261 kb on + strand, within CA264_14155 at 3324.305 kb on - strand at 3324.327 kb on + strand at 3324.363 kb on - strand at 3324.431 kb on + strand at 3324.492 kb on - strand at 3324.499 kb on + strand at 3324.499 kb on + strand at 3324.500 kb on - strand at 3324.507 kb on + strand at 3324.508 kb on - strand at 3324.509 kb on + strand at 3324.626 kb on + strand at 3324.626 kb on + strand at 3324.626 kb on + strand at 3324.627 kb on - strand at 3324.647 kb on + strand at 3324.721 kb on + strand at 3324.722 kb on - strand at 3324.774 kb on + strand at 3324.775 kb on - strand at 3324.828 kb on + strand at 3324.828 kb on + strand at 3324.975 kb on - strand, within CA264_14160 at 3324.975 kb on - strand, within CA264_14160 at 3325.232 kb on + strand, within CA264_14160 at 3325.285 kb on + strand, within CA264_14160 at 3325.393 kb on + strand at 3325.406 kb on - strand at 3325.407 kb on + strand at 3325.419 kb on - strand at 3325.425 kb on + strand at 3325.426 kb on - strand at 3325.426 kb on - strand at 3325.426 kb on - strand at 3325.434 kb on + strand at 3325.442 kb on + strand at 3325.442 kb on + strand at 3325.442 kb on + strand at 3325.443 kb on - strand at 3325.443 kb on - strand at 3325.443 kb on - strand at 3325.450 kb on + strand at 3325.585 kb on + strand at 3325.639 kb on + strand at 3325.640 kb on - strand at 3325.640 kb on - strand at 3325.640 kb on - strand at 3325.645 kb on - strand at 3325.646 kb on + strand at 3325.646 kb on + strand at 3325.647 kb on - strand at 3325.725 kb on - strand, within CA264_14165 at 3325.733 kb on - strand, within CA264_14165 at 3325.733 kb on - strand at 3325.815 kb on + strand, within CA264_14165 at 3325.815 kb on + strand, within CA264_14165 at 3325.816 kb on - strand, within CA264_14165 at 3325.816 kb on - strand, within CA264_14165 at 3325.817 kb on + strand, within CA264_14165 at 3325.818 kb on - strand, within CA264_14165 at 3325.818 kb on - strand, within CA264_14165 at 3325.837 kb on + strand, within CA264_14165 at 3325.838 kb on - strand, within CA264_14165 at 3325.870 kb on - strand, within CA264_14165 at 3325.913 kb on - strand, within CA264_14165 at 3325.913 kb on - strand, within CA264_14165 at 3326.068 kb on + strand, within CA264_14165 at 3326.069 kb on - strand, within CA264_14165 at 3326.069 kb on - strand, within CA264_14165 at 3326.069 kb on - strand, within CA264_14165 at 3326.111 kb on - strand, within CA264_14165 at 3326.182 kb on + strand, within CA264_14165 at 3326.190 kb on - strand, within CA264_14165 at 3326.255 kb on + strand, within CA264_14165 at 3326.256 kb on - strand, within CA264_14165 at 3326.259 kb on + strand, within CA264_14165 at 3326.259 kb on + strand, within CA264_14165 at 3326.383 kb on + strand, within CA264_14165 at 3326.383 kb on + strand, within CA264_14165 at 3326.384 kb on - strand, within CA264_14165 at 3326.384 kb on - strand, within CA264_14165
Per-strain Table
Position Strand Gene LocusTag Fraction marine_broth_2216 with Chloride 500 mM remove 3,323,867 + CA264_14155 0.58 -1.7 3,323,906 + CA264_14155 0.61 -2.1 3,323,906 + CA264_14155 0.61 -0.6 3,323,907 - CA264_14155 0.61 +1.2 3,323,907 - CA264_14155 0.61 +1.1 3,323,950 + CA264_14155 0.64 +0.4 3,323,950 + CA264_14155 0.64 -0.1 3,323,951 - CA264_14155 0.64 +0.1 3,324,011 + CA264_14155 0.69 +1.0 3,324,035 + CA264_14155 0.71 +0.2 3,324,035 + CA264_14155 0.71 +1.2 3,324,036 - CA264_14155 0.71 -0.2 3,324,036 - CA264_14155 0.71 +1.2 3,324,147 + CA264_14155 0.80 +0.2 3,324,148 - CA264_14155 0.80 -1.2 3,324,148 - CA264_14155 0.80 +1.2 3,324,171 - CA264_14155 0.82 +0.0 3,324,171 - CA264_14155 0.82 +0.0 3,324,171 - CA264_14155 0.82 +0.8 3,324,182 + CA264_14155 0.83 -0.8 3,324,183 - CA264_14155 0.83 +1.7 3,324,183 - CA264_14155 0.83 -0.9 3,324,183 - CA264_14155 0.83 +1.6 3,324,217 + CA264_14155 0.85 +0.4 3,324,253 - CA264_14155 0.88 -0.4 3,324,261 + CA264_14155 0.89 -1.4 3,324,305 - -0.4 3,324,327 + -0.4 3,324,363 - +0.1 3,324,431 + +0.5 3,324,492 - -0.1 3,324,499 + -0.3 3,324,499 + +0.2 3,324,500 - -0.1 3,324,507 + -0.8 3,324,508 - +0.3 3,324,509 + +0.2 3,324,626 + -1.8 3,324,626 + -1.4 3,324,626 + -0.2 3,324,627 - +0.6 3,324,647 + +1.2 3,324,721 + -0.4 3,324,722 - +2.5 3,324,774 + +0.3 3,324,775 - +1.2 3,324,828 + +0.3 3,324,828 + -0.3 3,324,975 - CA264_14160 0.28 +0.9 3,324,975 - CA264_14160 0.28 +0.8 3,325,232 + CA264_14160 0.72 +0.3 3,325,285 + CA264_14160 0.80 +1.2 3,325,393 + +0.1 3,325,406 - -0.3 3,325,407 + -0.3 3,325,419 - +0.1 3,325,425 + -0.1 3,325,426 - +0.5 3,325,426 - -0.9 3,325,426 - -0.4 3,325,434 + +0.4 3,325,442 + +0.4 3,325,442 + -0.5 3,325,442 + +1.2 3,325,443 - -0.7 3,325,443 - -0.4 3,325,443 - -0.1 3,325,450 + +0.5 3,325,585 + +0.2 3,325,639 + -0.5 3,325,640 - -0.3 3,325,640 - +0.2 3,325,640 - -1.6 3,325,645 - +0.2 3,325,646 + -0.6 3,325,646 + +0.2 3,325,647 - +0.2 3,325,725 - CA264_14165 0.11 -0.4 3,325,733 - CA264_14165 0.11 -0.3 3,325,733 - -1.1 3,325,815 + CA264_14165 0.15 +0.3 3,325,815 + CA264_14165 0.15 -1.4 3,325,816 - CA264_14165 0.15 +0.2 3,325,816 - CA264_14165 0.15 +1.2 3,325,817 + CA264_14165 0.15 -0.7 3,325,818 - CA264_14165 0.15 +2.2 3,325,818 - CA264_14165 0.15 -0.8 3,325,837 + CA264_14165 0.16 -0.4 3,325,838 - CA264_14165 0.16 -0.7 3,325,870 - CA264_14165 0.17 -0.7 3,325,913 - CA264_14165 0.19 -1.1 3,325,913 - CA264_14165 0.19 +0.1 3,326,068 + CA264_14165 0.26 -0.3 3,326,069 - CA264_14165 0.26 +1.8 3,326,069 - CA264_14165 0.26 -0.2 3,326,069 - CA264_14165 0.26 -0.0 3,326,111 - CA264_14165 0.28 -0.4 3,326,182 + CA264_14165 0.31 -0.8 3,326,190 - CA264_14165 0.31 +0.4 3,326,255 + CA264_14165 0.34 +0.2 3,326,256 - CA264_14165 0.34 -0.3 3,326,259 + CA264_14165 0.34 -0.5 3,326,259 + CA264_14165 0.34 +0.9 3,326,383 + CA264_14165 0.39 -1.0 3,326,383 + CA264_14165 0.39 +1.8 3,326,384 - CA264_14165 0.39 +1.2 3,326,384 - CA264_14165 0.39 -0.0
Or see this region's nucleotide sequence