Experiment: marine_broth_2216 with Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01530 and CA264_01535 are separated by 90 nucleotides CA264_01535 and CA264_01540 are separated by 440 nucleotides CA264_01540 and CA264_01545 are separated by 147 nucleotides
CA264_01530: CA264_01530 - hypothetical protein, at 362,687 to 363,730
_01530
CA264_01535: CA264_01535 - hypothetical protein, at 363,821 to 364,003
_01535
CA264_01540: CA264_01540 - hypothetical protein, at 364,444 to 364,767
_01540
CA264_01545: CA264_01545 - 3-deoxy-7-phosphoheptulonate synthase, at 364,915 to 366,036
_01545
Position (kb) 364
365 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 363.445 kb on + strand, within CA264_01530 at 363.445 kb on + strand, within CA264_01530 at 363.446 kb on - strand, within CA264_01530 at 363.446 kb on - strand, within CA264_01530 at 363.446 kb on - strand, within CA264_01530 at 363.447 kb on + strand, within CA264_01530 at 363.447 kb on + strand, within CA264_01530 at 363.448 kb on - strand, within CA264_01530 at 363.472 kb on - strand, within CA264_01530 at 363.485 kb on + strand, within CA264_01530 at 363.494 kb on - strand, within CA264_01530 at 363.497 kb on + strand, within CA264_01530 at 363.498 kb on - strand, within CA264_01530 at 363.619 kb on + strand, within CA264_01530 at 363.631 kb on - strand at 363.654 kb on - strand at 363.685 kb on + strand at 363.686 kb on - strand at 363.728 kb on + strand at 363.749 kb on - strand at 363.822 kb on + strand at 363.823 kb on - strand at 364.006 kb on + strand at 364.093 kb on - strand at 364.103 kb on + strand at 364.103 kb on + strand at 364.104 kb on - strand at 364.104 kb on - strand at 364.104 kb on - strand at 364.105 kb on + strand at 364.106 kb on - strand at 364.106 kb on - strand at 364.115 kb on - strand at 364.115 kb on - strand at 364.232 kb on + strand at 364.232 kb on + strand at 364.232 kb on + strand at 364.233 kb on - strand at 364.233 kb on - strand at 364.269 kb on - strand at 364.269 kb on - strand at 364.275 kb on + strand at 364.281 kb on + strand at 364.424 kb on - strand at 364.424 kb on - strand at 364.429 kb on + strand at 364.429 kb on + strand at 364.446 kb on - strand at 364.446 kb on - strand at 364.446 kb on - strand at 364.588 kb on - strand, within CA264_01540 at 364.611 kb on - strand, within CA264_01540 at 364.675 kb on - strand, within CA264_01540 at 364.675 kb on - strand, within CA264_01540 at 364.677 kb on - strand, within CA264_01540 at 364.689 kb on + strand, within CA264_01540 at 364.689 kb on + strand, within CA264_01540 at 364.693 kb on + strand, within CA264_01540 at 364.693 kb on + strand, within CA264_01540 at 364.694 kb on - strand, within CA264_01540 at 364.694 kb on - strand, within CA264_01540 at 364.712 kb on + strand, within CA264_01540 at 364.719 kb on + strand, within CA264_01540 at 364.773 kb on + strand at 364.781 kb on + strand at 364.782 kb on - strand at 364.916 kb on + strand at 364.916 kb on + strand at 364.917 kb on - strand at 364.989 kb on + strand at 364.990 kb on - strand at 365.622 kb on + strand, within CA264_01545 at 365.623 kb on - strand, within CA264_01545 at 365.635 kb on + strand, within CA264_01545 at 365.761 kb on + strand, within CA264_01545 at 365.761 kb on + strand, within CA264_01545
Per-strain Table
Position Strand Gene LocusTag Fraction marine_broth_2216 with Chloride 500 mM remove 363,445 + CA264_01530 0.73 +1.1 363,445 + CA264_01530 0.73 +0.4 363,446 - CA264_01530 0.73 -0.0 363,446 - CA264_01530 0.73 -0.4 363,446 - CA264_01530 0.73 -0.5 363,447 + CA264_01530 0.73 +0.8 363,447 + CA264_01530 0.73 -0.5 363,448 - CA264_01530 0.73 +1.9 363,472 - CA264_01530 0.75 -0.3 363,485 + CA264_01530 0.76 +1.1 363,494 - CA264_01530 0.77 +0.3 363,497 + CA264_01530 0.78 +0.5 363,498 - CA264_01530 0.78 +0.8 363,619 + CA264_01530 0.89 -0.5 363,631 - +0.1 363,654 - +0.0 363,685 + +0.4 363,686 - +0.0 363,728 + -0.3 363,749 - -0.4 363,822 + -0.9 363,823 - -0.7 364,006 + -1.2 364,093 - -0.3 364,103 + -0.3 364,103 + -0.3 364,104 - -0.5 364,104 - -0.1 364,104 - +0.5 364,105 + -0.2 364,106 - +3.4 364,106 - +1.1 364,115 - -0.2 364,115 - +0.8 364,232 + -0.5 364,232 + +2.9 364,232 + +1.4 364,233 - +2.1 364,233 - +0.2 364,269 - -0.5 364,269 - +0.1 364,275 + +0.0 364,281 + -1.5 364,424 - +0.1 364,424 - -0.1 364,429 + -1.5 364,429 + -0.3 364,446 - -1.3 364,446 - -0.2 364,446 - -0.0 364,588 - CA264_01540 0.44 -0.9 364,611 - CA264_01540 0.52 -0.8 364,675 - CA264_01540 0.71 -0.1 364,675 - CA264_01540 0.71 -0.2 364,677 - CA264_01540 0.72 +1.1 364,689 + CA264_01540 0.76 +1.0 364,689 + CA264_01540 0.76 +1.1 364,693 + CA264_01540 0.77 -1.1 364,693 + CA264_01540 0.77 +2.6 364,694 - CA264_01540 0.77 -0.7 364,694 - CA264_01540 0.77 -0.0 364,712 + CA264_01540 0.83 -0.0 364,719 + CA264_01540 0.85 -0.0 364,773 + +0.2 364,781 + +0.7 364,782 - +0.7 364,916 + -0.0 364,916 + +0.1 364,917 - -0.6 364,989 + +0.2 364,990 - -0.4 365,622 + CA264_01545 0.63 +1.1 365,623 - CA264_01545 0.63 -0.9 365,635 + CA264_01545 0.64 -1.9 365,761 + CA264_01545 0.75 +1.1 365,761 + CA264_01545 0.75 +0.5
Or see this region's nucleotide sequence