Experiment: marine_broth_2216 with Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00825 and CA264_00830 are separated by 252 nucleotides CA264_00830 and CA264_00835 are separated by 205 nucleotides CA264_00835 and CA264_00840 are separated by 84 nucleotides
CA264_00825: CA264_00825 - methyltransferase, at 176,652 to 177,368
_00825
CA264_00830: CA264_00830 - ribonuclease HI, at 177,621 to 178,091
_00830
CA264_00835: CA264_00835 - hypothetical protein, at 178,297 to 178,857
_00835
CA264_00840: CA264_00840 - phosphoserine aminotransferase, at 178,942 to 180,003
_00840
Position (kb) 178
179 Strain fitness (log2 ratio) -2
-1
0
1 at 177.320 kb on + strand at 177.320 kb on + strand at 177.356 kb on - strand at 177.491 kb on + strand at 177.491 kb on + strand at 177.537 kb on + strand at 177.538 kb on - strand at 177.538 kb on - strand at 177.559 kb on + strand at 177.593 kb on + strand at 177.594 kb on - strand at 177.622 kb on + strand at 177.641 kb on - strand at 178.081 kb on - strand at 178.081 kb on - strand at 178.123 kb on + strand at 178.161 kb on + strand at 178.162 kb on - strand at 178.170 kb on + strand at 178.170 kb on + strand at 178.170 kb on + strand at 178.170 kb on + strand at 178.171 kb on - strand at 178.177 kb on - strand at 178.198 kb on + strand at 178.199 kb on - strand at 178.215 kb on + strand at 178.259 kb on - strand at 178.291 kb on + strand at 178.301 kb on - strand at 178.414 kb on + strand, within CA264_00835 at 178.418 kb on - strand, within CA264_00835 at 178.425 kb on - strand, within CA264_00835 at 178.454 kb on - strand, within CA264_00835 at 178.456 kb on + strand, within CA264_00835 at 178.457 kb on - strand, within CA264_00835 at 178.457 kb on - strand, within CA264_00835 at 178.475 kb on + strand, within CA264_00835 at 178.623 kb on + strand, within CA264_00835 at 178.623 kb on + strand, within CA264_00835 at 178.800 kb on + strand, within CA264_00835 at 178.847 kb on - strand at 178.883 kb on + strand at 178.883 kb on + strand at 178.929 kb on + strand at 178.929 kb on + strand at 178.930 kb on - strand at 178.930 kb on - strand at 178.932 kb on - strand at 178.938 kb on + strand at 178.938 kb on + strand at 178.939 kb on - strand at 178.939 kb on - strand at 178.939 kb on - strand at 178.939 kb on - strand at 178.940 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction marine_broth_2216 with Chloride 500 mM remove 177,320 + +1.1 177,320 + +1.1 177,356 - -0.1 177,491 + -0.1 177,491 + -2.2 177,537 + -0.1 177,538 - +0.4 177,538 - +0.9 177,559 + -0.8 177,593 + -0.4 177,594 - +0.6 177,622 + +0.1 177,641 - -1.4 178,081 - -2.4 178,081 - -1.2 178,123 + -0.4 178,161 + -0.1 178,162 - +1.6 178,170 + -0.6 178,170 + -0.4 178,170 + -0.1 178,170 + -0.9 178,171 - +0.3 178,177 - -0.3 178,198 + -1.4 178,199 - -0.3 178,215 + -0.6 178,259 - +1.7 178,291 + -1.2 178,301 - -0.2 178,414 + CA264_00835 0.21 +0.7 178,418 - CA264_00835 0.22 +0.1 178,425 - CA264_00835 0.23 +0.0 178,454 - CA264_00835 0.28 -2.2 178,456 + CA264_00835 0.28 -1.2 178,457 - CA264_00835 0.29 +1.1 178,457 - CA264_00835 0.29 -1.6 178,475 + CA264_00835 0.32 -0.1 178,623 + CA264_00835 0.58 -1.9 178,623 + CA264_00835 0.58 -0.7 178,800 + CA264_00835 0.90 +0.3 178,847 - -0.4 178,883 + -0.8 178,883 + +0.4 178,929 + -0.4 178,929 + +0.0 178,930 - -1.7 178,930 - -0.2 178,932 - -1.1 178,938 + +0.2 178,938 + -0.7 178,939 - +0.1 178,939 - -0.6 178,939 - -0.9 178,939 - -0.3 178,940 + +1.4
Or see this region's nucleotide sequence