Strain Fitness in Escherichia coli BW25113 around b2129
Experiment: decyl alcohol 5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | decyl alcohol 5 vol% |
---|---|---|---|---|---|
remove | |||||
2,213,506 | + | mlrA | b2127 | 0.84 | +0.2 |
2,213,506 | + | mlrA | b2127 | 0.84 | +0.6 |
2,213,513 | + | mlrA | b2127 | 0.85 | -0.2 |
2,213,641 | + | +2.1 | |||
2,213,641 | + | -0.1 | |||
2,213,646 | + | +0.9 | |||
2,213,654 | - | +0.0 | |||
2,213,684 | - | -0.1 | |||
2,213,781 | + | +0.0 | |||
2,213,819 | + | +0.2 | |||
2,213,903 | - | yehW | b2128 | 0.19 | -0.1 |
2,213,988 | - | yehW | b2128 | 0.30 | +0.8 |
2,214,022 | - | yehW | b2128 | 0.35 | +0.3 |
2,214,159 | + | yehW | b2128 | 0.54 | -0.2 |
2,214,356 | - | yehW | b2128 | 0.80 | -0.4 |
2,214,356 | - | yehW | b2128 | 0.80 | -0.3 |
2,214,491 | + | +1.6 | |||
2,214,491 | + | -0.4 | |||
2,214,540 | + | -1.3 | |||
2,214,540 | + | +0.4 | |||
2,214,554 | - | -0.4 | |||
2,214,568 | - | -0.3 | |||
2,214,700 | + | yehX | b2129 | 0.21 | -0.6 |
2,214,708 | - | yehX | b2129 | 0.22 | -1.6 |
2,214,965 | + | yehX | b2129 | 0.50 | -0.0 |
2,214,997 | + | yehX | b2129 | 0.53 | -0.2 |
2,215,044 | - | yehX | b2129 | 0.58 | -0.6 |
2,215,044 | - | yehX | b2129 | 0.58 | -0.1 |
2,215,187 | - | yehX | b2129 | 0.74 | -0.1 |
2,215,394 | + | -0.2 | |||
2,215,450 | + | -1.1 | |||
2,215,461 | + | +1.4 | |||
2,215,683 | - | yehY | b2130 | 0.23 | -0.2 |
2,215,683 | - | yehY | b2130 | 0.23 | +0.1 |
2,215,698 | - | yehY | b2130 | 0.24 | +0.9 |
2,215,698 | - | yehY | b2130 | 0.24 | -0.0 |
2,215,701 | - | yehY | b2130 | 0.24 | +0.4 |
2,215,805 | + | yehY | b2130 | 0.33 | +0.6 |
2,215,876 | - | yehY | b2130 | 0.39 | +0.4 |
2,215,909 | - | yehY | b2130 | 0.42 | -0.3 |
2,215,909 | - | yehY | b2130 | 0.42 | +0.2 |
2,215,998 | + | yehY | b2130 | 0.50 | -0.6 |
2,216,025 | + | yehY | b2130 | 0.52 | +0.4 |
2,216,025 | + | yehY | b2130 | 0.52 | -0.8 |
2,216,209 | + | yehY | b2130 | 0.68 | -0.5 |
2,216,209 | + | yehY | b2130 | 0.68 | +0.2 |
2,216,217 | - | yehY | b2130 | 0.69 | -0.2 |
2,216,217 | - | yehY | b2130 | 0.69 | +1.3 |
2,216,355 | - | yehY | b2130 | 0.81 | +0.8 |
Or see this region's nucleotide sequence