Strain Fitness in Escherichia coli BW25113 around b1603
Experiment: decyl alcohol 5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | decyl alcohol 5 vol% |
---|---|---|---|---|---|
remove | |||||
1,673,501 | - | pntB | b1602 | 0.36 | +0.2 |
1,673,579 | - | pntB | b1602 | 0.42 | +0.4 |
1,673,579 | - | pntB | b1602 | 0.42 | +0.6 |
1,673,667 | + | pntB | b1602 | 0.48 | +0.1 |
1,673,672 | + | pntB | b1602 | 0.49 | +0.0 |
1,673,672 | + | pntB | b1602 | 0.49 | +0.3 |
1,673,878 | + | pntB | b1602 | 0.63 | -0.3 |
1,673,878 | + | pntB | b1602 | 0.63 | +0.1 |
1,674,216 | + | pntB | b1602 | 0.88 | -0.0 |
1,674,370 | - | +0.4 | |||
1,674,385 | + | +0.1 | |||
1,674,511 | - | +0.1 | |||
1,674,521 | - | +1.1 | |||
1,674,521 | - | +0.5 | |||
1,674,523 | + | +0.4 | |||
1,674,583 | - | pntA | b1603 | 0.12 | -0.4 |
1,674,865 | + | pntA | b1603 | 0.31 | -0.3 |
1,674,894 | - | pntA | b1603 | 0.33 | +0.4 |
1,675,064 | + | pntA | b1603 | 0.44 | +0.4 |
1,675,064 | + | pntA | b1603 | 0.44 | +1.8 |
1,675,987 | + | +0.1 | |||
1,675,987 | + | -0.2 | |||
1,675,997 | - | +0.4 | |||
1,675,997 | - | -0.1 | |||
1,676,126 | - | -2.2 | |||
1,676,139 | - | +0.1 | |||
1,676,139 | - | -0.1 | |||
1,676,139 | - | -0.1 | |||
1,676,139 | - | +0.1 | |||
1,676,154 | - | +0.7 | |||
1,676,257 | - | +0.7 | |||
1,676,257 | - | +0.4 | |||
1,676,418 | + | -1.1 | |||
1,676,523 | + | -1.9 | |||
1,676,770 | + | ydgH | b1604 | 0.34 | -2.5 |
1,676,818 | - | ydgH | b1604 | 0.39 | -2.5 |
Or see this region's nucleotide sequence