Experiment: marine_broth_2216 with Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2163 and B158DRAFT_2164 are separated by 75 nucleotides B158DRAFT_2164 and B158DRAFT_2165 are separated by 194 nucleotides B158DRAFT_2165 and B158DRAFT_2166 are separated by 9 nucleotides
B158DRAFT_2163: B158DRAFT_2163 - uroporphyrin-III C-methyltransferase, at 303,535 to 304,977
_2163
B158DRAFT_2164: B158DRAFT_2164 - amino acid/peptide transporter (Peptide:H+ symporter), bacterial, at 305,053 to 307,260
_2164
B158DRAFT_2165: B158DRAFT_2165 - Alkylated DNA repair protein, at 307,455 to 308,081
_2165
B158DRAFT_2166: B158DRAFT_2166 - putative quinone oxidoreductase, YhdH/YhfP family, at 308,091 to 309,086
_2166
Position (kb) 305
306
307
308 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 304.094 kb on + strand, within B158DRAFT_2163 at 304.129 kb on - strand, within B158DRAFT_2163 at 304.129 kb on - strand, within B158DRAFT_2163 at 304.223 kb on - strand, within B158DRAFT_2163 at 304.261 kb on + strand, within B158DRAFT_2163 at 304.261 kb on + strand, within B158DRAFT_2163 at 304.405 kb on + strand, within B158DRAFT_2163 at 304.422 kb on + strand, within B158DRAFT_2163 at 304.466 kb on + strand, within B158DRAFT_2163 at 304.533 kb on - strand, within B158DRAFT_2163 at 304.555 kb on + strand, within B158DRAFT_2163 at 304.563 kb on - strand, within B158DRAFT_2163 at 304.564 kb on + strand, within B158DRAFT_2163 at 304.760 kb on + strand, within B158DRAFT_2163 at 304.818 kb on + strand, within B158DRAFT_2163 at 304.836 kb on + strand at 305.001 kb on - strand at 305.111 kb on + strand at 305.140 kb on + strand at 305.140 kb on + strand at 305.203 kb on - strand at 305.210 kb on + strand at 305.210 kb on + strand at 305.218 kb on - strand at 305.436 kb on + strand, within B158DRAFT_2164 at 305.454 kb on - strand, within B158DRAFT_2164 at 305.522 kb on + strand, within B158DRAFT_2164 at 305.522 kb on + strand, within B158DRAFT_2164 at 305.522 kb on + strand, within B158DRAFT_2164 at 305.530 kb on - strand, within B158DRAFT_2164 at 305.530 kb on - strand, within B158DRAFT_2164 at 305.557 kb on + strand, within B158DRAFT_2164 at 305.575 kb on - strand, within B158DRAFT_2164 at 305.595 kb on + strand, within B158DRAFT_2164 at 305.595 kb on + strand, within B158DRAFT_2164 at 305.603 kb on - strand, within B158DRAFT_2164 at 305.608 kb on - strand, within B158DRAFT_2164 at 305.608 kb on - strand, within B158DRAFT_2164 at 305.622 kb on + strand, within B158DRAFT_2164 at 305.622 kb on + strand, within B158DRAFT_2164 at 305.622 kb on + strand, within B158DRAFT_2164 at 305.622 kb on + strand, within B158DRAFT_2164 at 305.630 kb on - strand, within B158DRAFT_2164 at 305.654 kb on + strand, within B158DRAFT_2164 at 305.662 kb on - strand, within B158DRAFT_2164 at 305.662 kb on - strand, within B158DRAFT_2164 at 305.738 kb on + strand, within B158DRAFT_2164 at 305.738 kb on + strand, within B158DRAFT_2164 at 305.746 kb on - strand, within B158DRAFT_2164 at 305.746 kb on - strand, within B158DRAFT_2164 at 305.878 kb on + strand, within B158DRAFT_2164 at 305.936 kb on + strand, within B158DRAFT_2164 at 305.942 kb on + strand, within B158DRAFT_2164 at 305.942 kb on + strand, within B158DRAFT_2164 at 305.942 kb on + strand, within B158DRAFT_2164 at 305.942 kb on + strand, within B158DRAFT_2164 at 305.948 kb on + strand, within B158DRAFT_2164 at 305.957 kb on - strand, within B158DRAFT_2164 at 306.021 kb on + strand, within B158DRAFT_2164 at 306.029 kb on - strand, within B158DRAFT_2164 at 306.039 kb on - strand, within B158DRAFT_2164 at 306.058 kb on + strand, within B158DRAFT_2164 at 306.092 kb on - strand, within B158DRAFT_2164 at 306.095 kb on + strand, within B158DRAFT_2164 at 306.095 kb on + strand, within B158DRAFT_2164 at 306.095 kb on + strand, within B158DRAFT_2164 at 306.095 kb on + strand, within B158DRAFT_2164 at 306.095 kb on + strand, within B158DRAFT_2164 at 306.100 kb on + strand, within B158DRAFT_2164 at 306.100 kb on + strand, within B158DRAFT_2164 at 306.103 kb on - strand, within B158DRAFT_2164 at 306.182 kb on + strand, within B158DRAFT_2164 at 306.184 kb on + strand, within B158DRAFT_2164 at 306.273 kb on - strand, within B158DRAFT_2164 at 306.292 kb on + strand, within B158DRAFT_2164 at 306.292 kb on + strand, within B158DRAFT_2164 at 306.300 kb on - strand, within B158DRAFT_2164 at 306.383 kb on - strand, within B158DRAFT_2164 at 306.409 kb on - strand, within B158DRAFT_2164 at 306.495 kb on - strand, within B158DRAFT_2164 at 306.522 kb on - strand, within B158DRAFT_2164 at 306.556 kb on - strand, within B158DRAFT_2164 at 306.556 kb on - strand, within B158DRAFT_2164 at 306.564 kb on - strand, within B158DRAFT_2164 at 306.607 kb on - strand, within B158DRAFT_2164 at 306.644 kb on + strand, within B158DRAFT_2164 at 306.651 kb on - strand, within B158DRAFT_2164 at 306.652 kb on - strand, within B158DRAFT_2164 at 306.660 kb on - strand, within B158DRAFT_2164 at 306.670 kb on + strand, within B158DRAFT_2164 at 306.670 kb on + strand, within B158DRAFT_2164 at 306.692 kb on - strand, within B158DRAFT_2164 at 306.770 kb on + strand, within B158DRAFT_2164 at 306.770 kb on - strand, within B158DRAFT_2164 at 306.770 kb on - strand, within B158DRAFT_2164 at 306.804 kb on - strand, within B158DRAFT_2164 at 306.829 kb on + strand, within B158DRAFT_2164 at 306.837 kb on - strand, within B158DRAFT_2164 at 306.837 kb on - strand, within B158DRAFT_2164 at 306.837 kb on - strand, within B158DRAFT_2164 at 306.837 kb on - strand, within B158DRAFT_2164 at 306.837 kb on - strand, within B158DRAFT_2164 at 306.845 kb on + strand, within B158DRAFT_2164 at 306.862 kb on + strand, within B158DRAFT_2164 at 306.932 kb on - strand, within B158DRAFT_2164 at 306.932 kb on - strand, within B158DRAFT_2164 at 306.946 kb on + strand, within B158DRAFT_2164 at 306.954 kb on - strand, within B158DRAFT_2164 at 307.016 kb on + strand, within B158DRAFT_2164 at 307.049 kb on + strand at 307.049 kb on + strand at 307.054 kb on + strand at 307.057 kb on - strand at 307.057 kb on - strand at 307.062 kb on - strand at 307.062 kb on - strand at 307.064 kb on + strand at 307.064 kb on + strand at 307.064 kb on + strand at 307.072 kb on - strand at 307.072 kb on - strand at 307.072 kb on - strand at 307.192 kb on + strand at 307.249 kb on - strand at 307.300 kb on - strand at 307.321 kb on + strand at 307.363 kb on + strand at 307.458 kb on + strand at 307.486 kb on + strand at 307.526 kb on - strand, within B158DRAFT_2165 at 307.543 kb on - strand, within B158DRAFT_2165 at 307.643 kb on - strand, within B158DRAFT_2165 at 307.654 kb on + strand, within B158DRAFT_2165 at 307.662 kb on - strand, within B158DRAFT_2165 at 307.749 kb on + strand, within B158DRAFT_2165 at 307.749 kb on - strand, within B158DRAFT_2165 at 307.749 kb on - strand, within B158DRAFT_2165 at 307.754 kb on + strand, within B158DRAFT_2165 at 307.777 kb on - strand, within B158DRAFT_2165 at 307.790 kb on - strand, within B158DRAFT_2165 at 307.808 kb on + strand, within B158DRAFT_2165 at 307.808 kb on + strand, within B158DRAFT_2165 at 307.808 kb on + strand, within B158DRAFT_2165 at 307.816 kb on - strand, within B158DRAFT_2165 at 307.818 kb on + strand, within B158DRAFT_2165 at 307.826 kb on - strand, within B158DRAFT_2165 at 307.828 kb on + strand, within B158DRAFT_2165 at 307.828 kb on + strand, within B158DRAFT_2165 at 307.837 kb on + strand, within B158DRAFT_2165 at 307.845 kb on - strand, within B158DRAFT_2165 at 307.958 kb on + strand, within B158DRAFT_2165 at 307.980 kb on + strand, within B158DRAFT_2165 at 307.980 kb on + strand, within B158DRAFT_2165 at 307.988 kb on + strand, within B158DRAFT_2165 at 307.988 kb on + strand, within B158DRAFT_2165 at 307.988 kb on - strand, within B158DRAFT_2165 at 307.996 kb on - strand, within B158DRAFT_2165 at 308.201 kb on - strand, within B158DRAFT_2166 at 308.218 kb on - strand, within B158DRAFT_2166 at 308.244 kb on + strand, within B158DRAFT_2166 at 308.244 kb on + strand, within B158DRAFT_2166 at 308.244 kb on + strand, within B158DRAFT_2166 at 308.244 kb on + strand, within B158DRAFT_2166 at 308.252 kb on - strand, within B158DRAFT_2166
Per-strain Table
Position Strand Gene LocusTag Fraction marine_broth_2216 with Chloride 500 mM remove 304,094 + B158DRAFT_2163 0.39 -0.4 304,129 - B158DRAFT_2163 0.41 +0.4 304,129 - B158DRAFT_2163 0.41 -0.3 304,223 - B158DRAFT_2163 0.48 -0.0 304,261 + B158DRAFT_2163 0.50 -0.2 304,261 + B158DRAFT_2163 0.50 +0.2 304,405 + B158DRAFT_2163 0.60 -0.5 304,422 + B158DRAFT_2163 0.61 -2.1 304,466 + B158DRAFT_2163 0.65 -0.4 304,533 - B158DRAFT_2163 0.69 -0.0 304,555 + B158DRAFT_2163 0.71 +0.1 304,563 - B158DRAFT_2163 0.71 +0.1 304,564 + B158DRAFT_2163 0.71 -0.5 304,760 + B158DRAFT_2163 0.85 -0.8 304,818 + B158DRAFT_2163 0.89 -0.2 304,836 + -1.9 305,001 - +0.3 305,111 + -1.4 305,140 + -0.6 305,140 + -1.3 305,203 - -1.3 305,210 + -0.6 305,210 + -2.2 305,218 - -0.6 305,436 + B158DRAFT_2164 0.17 -1.0 305,454 - B158DRAFT_2164 0.18 -1.0 305,522 + B158DRAFT_2164 0.21 -1.1 305,522 + B158DRAFT_2164 0.21 -1.6 305,522 + B158DRAFT_2164 0.21 -1.5 305,530 - B158DRAFT_2164 0.22 -0.6 305,530 - B158DRAFT_2164 0.22 -0.7 305,557 + B158DRAFT_2164 0.23 -1.1 305,575 - B158DRAFT_2164 0.24 -1.4 305,595 + B158DRAFT_2164 0.25 -1.3 305,595 + B158DRAFT_2164 0.25 -1.5 305,603 - B158DRAFT_2164 0.25 -1.6 305,608 - B158DRAFT_2164 0.25 -0.8 305,608 - B158DRAFT_2164 0.25 -0.1 305,622 + B158DRAFT_2164 0.26 -1.0 305,622 + B158DRAFT_2164 0.26 -0.7 305,622 + B158DRAFT_2164 0.26 -0.6 305,622 + B158DRAFT_2164 0.26 -0.8 305,630 - B158DRAFT_2164 0.26 -1.0 305,654 + B158DRAFT_2164 0.27 -1.4 305,662 - B158DRAFT_2164 0.28 -1.4 305,662 - B158DRAFT_2164 0.28 -0.2 305,738 + B158DRAFT_2164 0.31 -0.9 305,738 + B158DRAFT_2164 0.31 -0.8 305,746 - B158DRAFT_2164 0.31 -1.4 305,746 - B158DRAFT_2164 0.31 -1.6 305,878 + B158DRAFT_2164 0.37 -3.0 305,936 + B158DRAFT_2164 0.40 -1.2 305,942 + B158DRAFT_2164 0.40 -1.1 305,942 + B158DRAFT_2164 0.40 -0.9 305,942 + B158DRAFT_2164 0.40 -1.6 305,942 + B158DRAFT_2164 0.40 -0.4 305,948 + B158DRAFT_2164 0.41 -0.4 305,957 - B158DRAFT_2164 0.41 -1.5 306,021 + B158DRAFT_2164 0.44 -1.5 306,029 - B158DRAFT_2164 0.44 -3.0 306,039 - B158DRAFT_2164 0.45 -2.1 306,058 + B158DRAFT_2164 0.46 -1.7 306,092 - B158DRAFT_2164 0.47 -0.9 306,095 + B158DRAFT_2164 0.47 -0.4 306,095 + B158DRAFT_2164 0.47 -2.1 306,095 + B158DRAFT_2164 0.47 -1.6 306,095 + B158DRAFT_2164 0.47 -1.6 306,095 + B158DRAFT_2164 0.47 +0.1 306,100 + B158DRAFT_2164 0.47 -0.7 306,100 + B158DRAFT_2164 0.47 -2.4 306,103 - B158DRAFT_2164 0.48 -1.2 306,182 + B158DRAFT_2164 0.51 -1.6 306,184 + B158DRAFT_2164 0.51 -1.4 306,273 - B158DRAFT_2164 0.55 -0.5 306,292 + B158DRAFT_2164 0.56 -1.7 306,292 + B158DRAFT_2164 0.56 -1.2 306,300 - B158DRAFT_2164 0.56 -1.0 306,383 - B158DRAFT_2164 0.60 -1.3 306,409 - B158DRAFT_2164 0.61 -2.4 306,495 - B158DRAFT_2164 0.65 -2.0 306,522 - B158DRAFT_2164 0.67 -0.7 306,556 - B158DRAFT_2164 0.68 -2.1 306,556 - B158DRAFT_2164 0.68 -3.1 306,564 - B158DRAFT_2164 0.68 -1.8 306,607 - B158DRAFT_2164 0.70 -1.0 306,644 + B158DRAFT_2164 0.72 -2.4 306,651 - B158DRAFT_2164 0.72 -1.3 306,652 - B158DRAFT_2164 0.72 -0.4 306,660 - B158DRAFT_2164 0.73 -1.1 306,670 + B158DRAFT_2164 0.73 -0.6 306,670 + B158DRAFT_2164 0.73 -0.9 306,692 - B158DRAFT_2164 0.74 -0.9 306,770 + B158DRAFT_2164 0.78 -1.4 306,770 - B158DRAFT_2164 0.78 +0.1 306,770 - B158DRAFT_2164 0.78 -0.8 306,804 - B158DRAFT_2164 0.79 -0.9 306,829 + B158DRAFT_2164 0.80 -1.0 306,837 - B158DRAFT_2164 0.81 -2.1 306,837 - B158DRAFT_2164 0.81 -1.8 306,837 - B158DRAFT_2164 0.81 -1.8 306,837 - B158DRAFT_2164 0.81 -3.8 306,837 - B158DRAFT_2164 0.81 -1.1 306,845 + B158DRAFT_2164 0.81 -1.5 306,862 + B158DRAFT_2164 0.82 -1.2 306,932 - B158DRAFT_2164 0.85 -0.6 306,932 - B158DRAFT_2164 0.85 -0.9 306,946 + B158DRAFT_2164 0.86 -0.5 306,954 - B158DRAFT_2164 0.86 -1.0 307,016 + B158DRAFT_2164 0.89 -1.8 307,049 + -0.9 307,049 + -0.1 307,054 + -1.1 307,057 - -0.3 307,057 - -0.3 307,062 - -1.3 307,062 - -2.3 307,064 + -1.1 307,064 + -0.4 307,064 + -1.5 307,072 - -1.2 307,072 - -1.7 307,072 - -2.0 307,192 + -1.3 307,249 - -0.6 307,300 - -0.4 307,321 + -0.9 307,363 + -1.4 307,458 + -1.4 307,486 + +0.4 307,526 - B158DRAFT_2165 0.11 -0.4 307,543 - B158DRAFT_2165 0.14 -0.5 307,643 - B158DRAFT_2165 0.30 +0.1 307,654 + B158DRAFT_2165 0.32 -0.4 307,662 - B158DRAFT_2165 0.33 -0.6 307,749 + B158DRAFT_2165 0.47 -0.8 307,749 - B158DRAFT_2165 0.47 -0.7 307,749 - B158DRAFT_2165 0.47 +0.3 307,754 + B158DRAFT_2165 0.48 +0.3 307,777 - B158DRAFT_2165 0.51 +1.1 307,790 - B158DRAFT_2165 0.53 -0.2 307,808 + B158DRAFT_2165 0.56 +0.5 307,808 + B158DRAFT_2165 0.56 +0.5 307,808 + B158DRAFT_2165 0.56 -0.5 307,816 - B158DRAFT_2165 0.58 -2.4 307,818 + B158DRAFT_2165 0.58 +0.4 307,826 - B158DRAFT_2165 0.59 -0.2 307,828 + B158DRAFT_2165 0.59 -1.5 307,828 + B158DRAFT_2165 0.59 +0.4 307,837 + B158DRAFT_2165 0.61 -1.2 307,845 - B158DRAFT_2165 0.62 +0.7 307,958 + B158DRAFT_2165 0.80 -0.7 307,980 + B158DRAFT_2165 0.84 -0.0 307,980 + B158DRAFT_2165 0.84 -1.6 307,988 + B158DRAFT_2165 0.85 -0.1 307,988 + B158DRAFT_2165 0.85 +0.4 307,988 - B158DRAFT_2165 0.85 -0.4 307,996 - B158DRAFT_2165 0.86 -1.1 308,201 - B158DRAFT_2166 0.11 +0.3 308,218 - B158DRAFT_2166 0.13 -1.4 308,244 + B158DRAFT_2166 0.15 -0.3 308,244 + B158DRAFT_2166 0.15 +0.1 308,244 + B158DRAFT_2166 0.15 -0.6 308,244 + B158DRAFT_2166 0.15 -0.1 308,252 - B158DRAFT_2166 0.16 -0.4
Or see this region's nucleotide sequence