Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1540

Experiment: marine_broth_2216 with Chloride 500 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1539 and B158DRAFT_1540 are separated by 184 nucleotidesB158DRAFT_1540 and B158DRAFT_1541 are separated by 195 nucleotidesB158DRAFT_1541 and B158DRAFT_1542 are separated by 1 nucleotides B158DRAFT_1539: B158DRAFT_1539 - hypothetical protein, at 1,592,976 to 1,595,576 _1539 B158DRAFT_1540: B158DRAFT_1540 - hypothetical protein, at 1,595,761 to 1,596,012 _1540 B158DRAFT_1541: B158DRAFT_1541 - ABC-type antimicrobial peptide transport system, ATPase component, at 1,596,208 to 1,596,966 _1541 B158DRAFT_1542: B158DRAFT_1542 - ABC-type transport system, involved in lipoprotein release, permease component, at 1,596,968 to 1,599,334 _1542 Position (kb) 1595 1596 1597Strain fitness (log2 ratio) -3 -2 -1 0 1at 1594.770 kb on - strand, within B158DRAFT_1539at 1594.857 kb on - strand, within B158DRAFT_1539at 1595.017 kb on - strand, within B158DRAFT_1539at 1595.094 kb on + strand, within B158DRAFT_1539at 1595.102 kb on - strand, within B158DRAFT_1539at 1595.108 kb on + strand, within B158DRAFT_1539at 1595.224 kb on - strand, within B158DRAFT_1539at 1595.438 kb on + strandat 1595.805 kb on + strand, within B158DRAFT_1540at 1595.879 kb on + strand, within B158DRAFT_1540at 1595.879 kb on + strand, within B158DRAFT_1540at 1595.949 kb on + strand, within B158DRAFT_1540at 1595.949 kb on + strand, within B158DRAFT_1540at 1595.949 kb on + strand, within B158DRAFT_1540at 1595.957 kb on - strand, within B158DRAFT_1540at 1595.969 kb on - strand, within B158DRAFT_1540at 1596.096 kb on + strandat 1596.117 kb on + strandat 1596.171 kb on + strandat 1596.179 kb on - strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.261 kb on + strandat 1596.269 kb on - strandat 1596.269 kb on - strandat 1596.269 kb on - strandat 1596.269 kb on - strandat 1596.269 kb on - strandat 1596.269 kb on - strandat 1596.269 kb on - strandat 1596.269 kb on - strandat 1596.269 kb on - strandat 1596.269 kb on - strandat 1596.269 kb on - strandat 1596.269 kb on - strandat 1596.269 kb on - strandat 1596.269 kb on - strandat 1596.269 kb on - strandat 1596.269 kb on - strandat 1596.269 kb on - strandat 1596.269 kb on - strandat 1596.269 kb on - strandat 1596.269 kb on - strandat 1596.269 kb on - strandat 1596.269 kb on - strandat 1596.269 kb on - strandat 1596.274 kb on - strandat 1596.281 kb on + strandat 1596.289 kb on - strand, within B158DRAFT_1541at 1596.291 kb on + strand, within B158DRAFT_1541at 1596.298 kb on + strand, within B158DRAFT_1541at 1596.315 kb on + strand, within B158DRAFT_1541at 1596.315 kb on + strand, within B158DRAFT_1541at 1596.315 kb on + strand, within B158DRAFT_1541at 1596.328 kb on + strand, within B158DRAFT_1541at 1596.344 kb on + strand, within B158DRAFT_1541at 1596.387 kb on + strand, within B158DRAFT_1541at 1596.395 kb on - strand, within B158DRAFT_1541at 1596.427 kb on + strand, within B158DRAFT_1541at 1596.428 kb on + strand, within B158DRAFT_1541at 1596.435 kb on - strand, within B158DRAFT_1541at 1596.453 kb on + strand, within B158DRAFT_1541at 1596.496 kb on - strand, within B158DRAFT_1541at 1596.550 kb on - strand, within B158DRAFT_1541at 1596.578 kb on + strand, within B158DRAFT_1541at 1596.628 kb on + strand, within B158DRAFT_1541at 1596.628 kb on + strand, within B158DRAFT_1541at 1596.628 kb on + strand, within B158DRAFT_1541at 1596.628 kb on + strand, within B158DRAFT_1541at 1596.628 kb on + strand, within B158DRAFT_1541at 1596.628 kb on + strand, within B158DRAFT_1541at 1596.628 kb on + strand, within B158DRAFT_1541at 1596.628 kb on + strand, within B158DRAFT_1541at 1596.636 kb on - strand, within B158DRAFT_1541at 1596.636 kb on - strand, within B158DRAFT_1541at 1596.636 kb on - strand, within B158DRAFT_1541at 1596.636 kb on - strand, within B158DRAFT_1541at 1596.681 kb on + strand, within B158DRAFT_1541at 1596.681 kb on + strand, within B158DRAFT_1541at 1596.681 kb on + strand, within B158DRAFT_1541at 1596.681 kb on + strand, within B158DRAFT_1541at 1596.681 kb on + strand, within B158DRAFT_1541at 1596.681 kb on + strand, within B158DRAFT_1541at 1596.681 kb on + strand, within B158DRAFT_1541at 1596.689 kb on - strand, within B158DRAFT_1541at 1596.689 kb on - strand, within B158DRAFT_1541at 1596.689 kb on - strand, within B158DRAFT_1541at 1596.689 kb on - strand, within B158DRAFT_1541at 1596.689 kb on - strand, within B158DRAFT_1541at 1596.689 kb on - strand, within B158DRAFT_1541at 1596.689 kb on - strand, within B158DRAFT_1541at 1596.689 kb on - strand, within B158DRAFT_1541at 1596.732 kb on + strand, within B158DRAFT_1541at 1596.756 kb on + strand, within B158DRAFT_1541at 1596.757 kb on - strand, within B158DRAFT_1541at 1596.764 kb on - strand, within B158DRAFT_1541at 1596.803 kb on + strand, within B158DRAFT_1541at 1596.803 kb on + strand, within B158DRAFT_1541at 1596.803 kb on + strand, within B158DRAFT_1541at 1596.811 kb on - strand, within B158DRAFT_1541at 1596.811 kb on - strand, within B158DRAFT_1541at 1596.811 kb on - strand, within B158DRAFT_1541at 1596.813 kb on + strand, within B158DRAFT_1541at 1596.813 kb on + strand, within B158DRAFT_1541at 1596.813 kb on + strand, within B158DRAFT_1541at 1596.813 kb on + strand, within B158DRAFT_1541at 1596.813 kb on + strand, within B158DRAFT_1541at 1596.813 kb on + strand, within B158DRAFT_1541at 1596.818 kb on + strand, within B158DRAFT_1541at 1596.821 kb on - strand, within B158DRAFT_1541at 1596.826 kb on - strand, within B158DRAFT_1541at 1596.851 kb on + strand, within B158DRAFT_1541at 1596.901 kb on - strandat 1596.927 kb on - strandat 1596.981 kb on + strandat 1596.981 kb on + strandat 1596.981 kb on + strandat 1596.989 kb on - strandat 1596.989 kb on - strandat 1596.989 kb on - strandat 1597.000 kb on + strandat 1597.010 kb on + strandat 1597.010 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction marine_broth_2216 with Chloride 500 mM
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1,594,770 - B158DRAFT_1539 0.69 +0.1
1,594,857 - B158DRAFT_1539 0.72 -0.4
1,595,017 - B158DRAFT_1539 0.78 +0.1
1,595,094 + B158DRAFT_1539 0.81 +0.0
1,595,102 - B158DRAFT_1539 0.82 -0.5
1,595,108 + B158DRAFT_1539 0.82 +1.0
1,595,224 - B158DRAFT_1539 0.86 +0.3
1,595,438 + -0.4
1,595,805 + B158DRAFT_1540 0.17 -0.2
1,595,879 + B158DRAFT_1540 0.47 -0.7
1,595,879 + B158DRAFT_1540 0.47 -0.8
1,595,949 + B158DRAFT_1540 0.75 -1.0
1,595,949 + B158DRAFT_1540 0.75 -0.2
1,595,949 + B158DRAFT_1540 0.75 +0.0
1,595,957 - B158DRAFT_1540 0.78 -0.6
1,595,969 - B158DRAFT_1540 0.83 +0.3
1,596,096 + +0.0
1,596,117 + -0.0
1,596,171 + -0.4
1,596,179 - -0.9
1,596,261 + -0.0
1,596,261 + +0.3
1,596,261 + -0.5
1,596,261 + -1.4
1,596,261 + -0.5
1,596,261 + -0.5
1,596,261 + +0.4
1,596,261 + -0.3
1,596,261 + -0.0
1,596,261 + +0.3
1,596,261 + -0.1
1,596,261 + -0.6
1,596,261 + +0.2
1,596,261 + +0.5
1,596,261 + -3.1
1,596,261 + -0.1
1,596,261 + +0.3
1,596,261 + -0.2
1,596,261 + -0.3
1,596,261 + -0.3
1,596,261 + -0.0
1,596,261 + -0.3
1,596,261 + -0.4
1,596,261 + +0.2
1,596,261 + +0.1
1,596,261 + -0.8
1,596,261 + +0.4
1,596,261 + +0.3
1,596,261 + -0.4
1,596,261 + -1.7
1,596,261 + -0.1
1,596,261 + -0.5
1,596,269 - -0.7
1,596,269 - +0.1
1,596,269 - +0.2
1,596,269 - +0.3
1,596,269 - -0.2
1,596,269 - +0.8
1,596,269 - +0.5
1,596,269 - -0.3
1,596,269 - +0.2
1,596,269 - +0.1
1,596,269 - -0.6
1,596,269 - -0.1
1,596,269 - -1.2
1,596,269 - +0.1
1,596,269 - +0.0
1,596,269 - -0.2
1,596,269 - +0.1
1,596,269 - -0.1
1,596,269 - -0.5
1,596,269 - -0.1
1,596,269 - +0.1
1,596,269 - -0.6
1,596,269 - +0.1
1,596,274 - +0.3
1,596,281 + +1.0
1,596,289 - B158DRAFT_1541 0.11 -0.1
1,596,291 + B158DRAFT_1541 0.11 -1.1
1,596,298 + B158DRAFT_1541 0.12 +0.3
1,596,315 + B158DRAFT_1541 0.14 -1.0
1,596,315 + B158DRAFT_1541 0.14 -0.0
1,596,315 + B158DRAFT_1541 0.14 +0.6
1,596,328 + B158DRAFT_1541 0.16 -0.4
1,596,344 + B158DRAFT_1541 0.18 -0.5
1,596,387 + B158DRAFT_1541 0.24 -0.3
1,596,395 - B158DRAFT_1541 0.25 -0.8
1,596,427 + B158DRAFT_1541 0.29 +0.1
1,596,428 + B158DRAFT_1541 0.29 -0.1
1,596,435 - B158DRAFT_1541 0.30 -0.1
1,596,453 + B158DRAFT_1541 0.32 +0.0
1,596,496 - B158DRAFT_1541 0.38 +0.8
1,596,550 - B158DRAFT_1541 0.45 +0.1
1,596,578 + B158DRAFT_1541 0.49 +0.1
1,596,628 + B158DRAFT_1541 0.55 -0.3
1,596,628 + B158DRAFT_1541 0.55 -0.2
1,596,628 + B158DRAFT_1541 0.55 +1.1
1,596,628 + B158DRAFT_1541 0.55 +0.0
1,596,628 + B158DRAFT_1541 0.55 -1.0
1,596,628 + B158DRAFT_1541 0.55 -0.7
1,596,628 + B158DRAFT_1541 0.55 +0.1
1,596,628 + B158DRAFT_1541 0.55 -0.1
1,596,636 - B158DRAFT_1541 0.56 -0.3
1,596,636 - B158DRAFT_1541 0.56 +0.7
1,596,636 - B158DRAFT_1541 0.56 +0.7
1,596,636 - B158DRAFT_1541 0.56 -0.0
1,596,681 + B158DRAFT_1541 0.62 +0.3
1,596,681 + B158DRAFT_1541 0.62 +0.1
1,596,681 + B158DRAFT_1541 0.62 -0.4
1,596,681 + B158DRAFT_1541 0.62 -1.1
1,596,681 + B158DRAFT_1541 0.62 +0.6
1,596,681 + B158DRAFT_1541 0.62 +0.1
1,596,681 + B158DRAFT_1541 0.62 -0.5
1,596,689 - B158DRAFT_1541 0.63 +0.2
1,596,689 - B158DRAFT_1541 0.63 -0.1
1,596,689 - B158DRAFT_1541 0.63 +0.1
1,596,689 - B158DRAFT_1541 0.63 +1.5
1,596,689 - B158DRAFT_1541 0.63 +0.3
1,596,689 - B158DRAFT_1541 0.63 -0.2
1,596,689 - B158DRAFT_1541 0.63 -0.2
1,596,689 - B158DRAFT_1541 0.63 -0.2
1,596,732 + B158DRAFT_1541 0.69 +0.1
1,596,756 + B158DRAFT_1541 0.72 -0.3
1,596,757 - B158DRAFT_1541 0.72 +0.2
1,596,764 - B158DRAFT_1541 0.73 -1.1
1,596,803 + B158DRAFT_1541 0.78 -0.0
1,596,803 + B158DRAFT_1541 0.78 -0.4
1,596,803 + B158DRAFT_1541 0.78 +0.2
1,596,811 - B158DRAFT_1541 0.79 +1.3
1,596,811 - B158DRAFT_1541 0.79 +0.1
1,596,811 - B158DRAFT_1541 0.79 -0.5
1,596,813 + B158DRAFT_1541 0.80 +0.1
1,596,813 + B158DRAFT_1541 0.80 -0.2
1,596,813 + B158DRAFT_1541 0.80 +0.2
1,596,813 + B158DRAFT_1541 0.80 -0.6
1,596,813 + B158DRAFT_1541 0.80 +1.0
1,596,813 + B158DRAFT_1541 0.80 -0.6
1,596,818 + B158DRAFT_1541 0.80 -0.5
1,596,821 - B158DRAFT_1541 0.81 -0.0
1,596,826 - B158DRAFT_1541 0.81 -0.5
1,596,851 + B158DRAFT_1541 0.85 -0.1
1,596,901 - -0.6
1,596,927 - -0.9
1,596,981 + -0.4
1,596,981 + +0.1
1,596,981 + +0.3
1,596,989 - -1.3
1,596,989 - -1.1
1,596,989 - -0.2
1,597,000 + -0.1
1,597,010 + +0.1
1,597,010 + -3.6

Or see this region's nucleotide sequence