Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1118

Experiment: marine_broth_2216 with Chloride 500 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1117 and B158DRAFT_1118 are separated by 154 nucleotidesB158DRAFT_1118 and B158DRAFT_1119 are separated by 80 nucleotides B158DRAFT_1117: B158DRAFT_1117 - prolyl-tRNA synthetase (EC 6.1.1.15), at 1,153,873 to 1,155,588 _1117 B158DRAFT_1118: B158DRAFT_1118 - hypothetical protein, at 1,155,743 to 1,155,982 _1118 B158DRAFT_1119: B158DRAFT_1119 - Predicted metal-dependent hydrolase with the TIM-barrel fold, at 1,156,063 to 1,157,712 _1119 Position (kb) 1155 1156Strain fitness (log2 ratio) -2 -1 0 1at 1155.650 kb on - strandat 1155.730 kb on - strandat 1155.799 kb on + strand, within B158DRAFT_1118at 1155.799 kb on + strand, within B158DRAFT_1118at 1155.799 kb on + strand, within B158DRAFT_1118at 1155.804 kb on + strand, within B158DRAFT_1118at 1155.807 kb on - strand, within B158DRAFT_1118at 1155.916 kb on + strand, within B158DRAFT_1118at 1155.916 kb on + strand, within B158DRAFT_1118at 1155.916 kb on + strand, within B158DRAFT_1118at 1155.922 kb on - strand, within B158DRAFT_1118at 1155.924 kb on - strand, within B158DRAFT_1118at 1155.939 kb on + strand, within B158DRAFT_1118at 1155.939 kb on + strand, within B158DRAFT_1118at 1155.959 kb on - strandat 1156.035 kb on - strandat 1156.061 kb on + strandat 1156.066 kb on + strandat 1156.074 kb on - strandat 1156.109 kb on + strandat 1156.117 kb on - strandat 1156.164 kb on - strandat 1156.187 kb on + strandat 1156.192 kb on + strandat 1156.209 kb on + strandat 1156.209 kb on + strandat 1156.214 kb on + strandat 1156.217 kb on - strandat 1156.222 kb on - strandat 1156.300 kb on - strand, within B158DRAFT_1119at 1156.306 kb on + strand, within B158DRAFT_1119at 1156.315 kb on + strand, within B158DRAFT_1119at 1156.315 kb on + strand, within B158DRAFT_1119at 1156.323 kb on - strand, within B158DRAFT_1119at 1156.323 kb on - strand, within B158DRAFT_1119at 1156.364 kb on - strand, within B158DRAFT_1119at 1156.366 kb on + strand, within B158DRAFT_1119at 1156.366 kb on + strand, within B158DRAFT_1119at 1156.366 kb on + strand, within B158DRAFT_1119at 1156.374 kb on - strand, within B158DRAFT_1119at 1156.454 kb on - strand, within B158DRAFT_1119at 1156.457 kb on + strand, within B158DRAFT_1119at 1156.557 kb on + strand, within B158DRAFT_1119at 1156.586 kb on - strand, within B158DRAFT_1119at 1156.623 kb on - strand, within B158DRAFT_1119at 1156.746 kb on + strand, within B158DRAFT_1119at 1156.746 kb on + strand, within B158DRAFT_1119at 1156.754 kb on - strand, within B158DRAFT_1119at 1156.754 kb on - strand, within B158DRAFT_1119at 1156.770 kb on - strand, within B158DRAFT_1119at 1156.806 kb on + strand, within B158DRAFT_1119at 1156.844 kb on - strand, within B158DRAFT_1119at 1156.870 kb on - strand, within B158DRAFT_1119at 1156.930 kb on - strand, within B158DRAFT_1119at 1156.944 kb on + strand, within B158DRAFT_1119at 1156.944 kb on + strand, within B158DRAFT_1119at 1156.952 kb on - strand, within B158DRAFT_1119at 1156.952 kb on - strand, within B158DRAFT_1119at 1156.952 kb on - strand, within B158DRAFT_1119at 1156.952 kb on - strand, within B158DRAFT_1119at 1156.952 kb on - strand, within B158DRAFT_1119at 1156.952 kb on - strand, within B158DRAFT_1119at 1156.952 kb on - strand, within B158DRAFT_1119

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Per-strain Table

Position Strand Gene LocusTag Fraction marine_broth_2216 with Chloride 500 mM
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1,155,650 - +0.9
1,155,730 - -0.9
1,155,799 + B158DRAFT_1118 0.23 -0.5
1,155,799 + B158DRAFT_1118 0.23 +1.4
1,155,799 + B158DRAFT_1118 0.23 -0.5
1,155,804 + B158DRAFT_1118 0.25 +0.1
1,155,807 - B158DRAFT_1118 0.27 -0.6
1,155,916 + B158DRAFT_1118 0.72 +0.7
1,155,916 + B158DRAFT_1118 0.72 +0.1
1,155,916 + B158DRAFT_1118 0.72 -0.9
1,155,922 - B158DRAFT_1118 0.75 -0.0
1,155,924 - B158DRAFT_1118 0.75 -0.2
1,155,939 + B158DRAFT_1118 0.82 -0.0
1,155,939 + B158DRAFT_1118 0.82 +0.4
1,155,959 - -0.1
1,156,035 - -0.2
1,156,061 + -0.7
1,156,066 + +0.4
1,156,074 - -0.3
1,156,109 + -0.4
1,156,117 - +0.1
1,156,164 - +0.3
1,156,187 + -1.1
1,156,192 + +1.7
1,156,209 + -0.2
1,156,209 + -0.1
1,156,214 + -0.1
1,156,217 - -1.3
1,156,222 - -0.9
1,156,300 - B158DRAFT_1119 0.14 -0.4
1,156,306 + B158DRAFT_1119 0.15 -0.2
1,156,315 + B158DRAFT_1119 0.15 -1.9
1,156,315 + B158DRAFT_1119 0.15 -0.8
1,156,323 - B158DRAFT_1119 0.16 -1.8
1,156,323 - B158DRAFT_1119 0.16 -1.0
1,156,364 - B158DRAFT_1119 0.18 -1.2
1,156,366 + B158DRAFT_1119 0.18 -0.8
1,156,366 + B158DRAFT_1119 0.18 -0.1
1,156,366 + B158DRAFT_1119 0.18 -0.7
1,156,374 - B158DRAFT_1119 0.19 +0.0
1,156,454 - B158DRAFT_1119 0.24 -0.1
1,156,457 + B158DRAFT_1119 0.24 -0.2
1,156,557 + B158DRAFT_1119 0.30 -0.1
1,156,586 - B158DRAFT_1119 0.32 -0.6
1,156,623 - B158DRAFT_1119 0.34 -1.5
1,156,746 + B158DRAFT_1119 0.41 +0.2
1,156,746 + B158DRAFT_1119 0.41 +0.1
1,156,754 - B158DRAFT_1119 0.42 +0.6
1,156,754 - B158DRAFT_1119 0.42 -0.1
1,156,770 - B158DRAFT_1119 0.43 -1.1
1,156,806 + B158DRAFT_1119 0.45 -1.2
1,156,844 - B158DRAFT_1119 0.47 +0.2
1,156,870 - B158DRAFT_1119 0.49 -0.0
1,156,930 - B158DRAFT_1119 0.53 -0.1
1,156,944 + B158DRAFT_1119 0.53 +0.1
1,156,944 + B158DRAFT_1119 0.53 -0.2
1,156,952 - B158DRAFT_1119 0.54 +0.2
1,156,952 - B158DRAFT_1119 0.54 +0.4
1,156,952 - B158DRAFT_1119 0.54 -0.2
1,156,952 - B158DRAFT_1119 0.54 +0.1
1,156,952 - B158DRAFT_1119 0.54 +0.4
1,156,952 - B158DRAFT_1119 0.54 +0.8
1,156,952 - B158DRAFT_1119 0.54 -0.3

Or see this region's nucleotide sequence