Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0356

Experiment: marine_broth_2216 with Chloride 500 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0355 and B158DRAFT_0356 are separated by 14 nucleotidesB158DRAFT_0356 and B158DRAFT_0357 are separated by 264 nucleotides B158DRAFT_0355: B158DRAFT_0355 - fatty oxidation complex, beta subunit FadA, at 356,284 to 357,453 _0355 B158DRAFT_0356: B158DRAFT_0356 - fatty oxidation complex, alpha subunit FadB, at 357,468 to 359,624 _0356 B158DRAFT_0357: B158DRAFT_0357 - Xaa-Pro aminopeptidase, at 359,889 to 361,208 _0357 Position (kb) 357 358 359 360Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 356.491 kb on + strand, within B158DRAFT_0355at 356.599 kb on - strand, within B158DRAFT_0355at 356.672 kb on - strand, within B158DRAFT_0355at 356.704 kb on - strand, within B158DRAFT_0355at 356.923 kb on - strand, within B158DRAFT_0355at 356.939 kb on - strand, within B158DRAFT_0355at 356.956 kb on - strand, within B158DRAFT_0355at 356.980 kb on - strand, within B158DRAFT_0355at 357.034 kb on + strand, within B158DRAFT_0355at 357.042 kb on - strand, within B158DRAFT_0355at 357.094 kb on - strand, within B158DRAFT_0355at 357.149 kb on + strand, within B158DRAFT_0355at 357.173 kb on - strand, within B158DRAFT_0355at 357.201 kb on - strand, within B158DRAFT_0355at 357.261 kb on + strand, within B158DRAFT_0355at 357.261 kb on + strand, within B158DRAFT_0355at 357.261 kb on + strand, within B158DRAFT_0355at 357.261 kb on + strand, within B158DRAFT_0355at 357.269 kb on - strand, within B158DRAFT_0355at 357.349 kb on - strandat 357.439 kb on - strandat 357.510 kb on + strandat 357.518 kb on - strandat 357.600 kb on + strandat 357.600 kb on + strandat 357.608 kb on - strandat 357.626 kb on - strandat 357.626 kb on - strandat 357.657 kb on + strandat 357.665 kb on - strandat 357.694 kb on - strand, within B158DRAFT_0356at 357.719 kb on + strand, within B158DRAFT_0356at 357.848 kb on + strand, within B158DRAFT_0356at 357.882 kb on - strand, within B158DRAFT_0356at 357.942 kb on + strand, within B158DRAFT_0356at 357.949 kb on + strand, within B158DRAFT_0356at 357.950 kb on - strand, within B158DRAFT_0356at 357.950 kb on - strand, within B158DRAFT_0356at 357.950 kb on - strand, within B158DRAFT_0356at 357.957 kb on - strand, within B158DRAFT_0356at 358.184 kb on - strand, within B158DRAFT_0356at 358.256 kb on - strand, within B158DRAFT_0356at 358.266 kb on - strand, within B158DRAFT_0356at 358.268 kb on + strand, within B158DRAFT_0356at 358.524 kb on + strand, within B158DRAFT_0356at 358.568 kb on + strand, within B158DRAFT_0356at 358.568 kb on + strand, within B158DRAFT_0356at 358.574 kb on - strand, within B158DRAFT_0356at 358.659 kb on + strand, within B158DRAFT_0356at 358.660 kb on - strand, within B158DRAFT_0356at 358.861 kb on + strand, within B158DRAFT_0356at 358.869 kb on - strand, within B158DRAFT_0356at 358.869 kb on - strand, within B158DRAFT_0356at 358.884 kb on - strand, within B158DRAFT_0356at 358.885 kb on + strand, within B158DRAFT_0356at 358.885 kb on + strand, within B158DRAFT_0356at 358.890 kb on + strand, within B158DRAFT_0356at 358.903 kb on - strand, within B158DRAFT_0356at 358.910 kb on + strand, within B158DRAFT_0356at 358.918 kb on - strand, within B158DRAFT_0356at 358.944 kb on - strand, within B158DRAFT_0356at 359.510 kb on + strandat 359.746 kb on + strandat 359.746 kb on + strandat 359.754 kb on - strandat 359.824 kb on - strandat 360.001 kb on + strandat 360.001 kb on + strandat 360.009 kb on - strandat 360.009 kb on - strandat 360.213 kb on + strand, within B158DRAFT_0357at 360.213 kb on + strand, within B158DRAFT_0357at 360.213 kb on + strand, within B158DRAFT_0357at 360.221 kb on - strand, within B158DRAFT_0357at 360.221 kb on - strand, within B158DRAFT_0357at 360.274 kb on + strand, within B158DRAFT_0357at 360.274 kb on + strand, within B158DRAFT_0357at 360.282 kb on - strand, within B158DRAFT_0357at 360.320 kb on + strand, within B158DRAFT_0357at 360.328 kb on - strand, within B158DRAFT_0357at 360.425 kb on - strand, within B158DRAFT_0357at 360.425 kb on - strand, within B158DRAFT_0357at 360.508 kb on + strand, within B158DRAFT_0357at 360.522 kb on + strand, within B158DRAFT_0357at 360.524 kb on - strand, within B158DRAFT_0357at 360.610 kb on - strand, within B158DRAFT_0357

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Per-strain Table

Position Strand Gene LocusTag Fraction marine_broth_2216 with Chloride 500 mM
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356,491 + B158DRAFT_0355 0.18 +0.0
356,599 - B158DRAFT_0355 0.27 -0.1
356,672 - B158DRAFT_0355 0.33 +0.0
356,704 - B158DRAFT_0355 0.36 +0.0
356,923 - B158DRAFT_0355 0.55 +0.7
356,939 - B158DRAFT_0355 0.56 -0.4
356,956 - B158DRAFT_0355 0.57 -0.8
356,980 - B158DRAFT_0355 0.59 -0.0
357,034 + B158DRAFT_0355 0.64 +0.4
357,042 - B158DRAFT_0355 0.65 +0.7
357,094 - B158DRAFT_0355 0.69 -0.5
357,149 + B158DRAFT_0355 0.74 +0.2
357,173 - B158DRAFT_0355 0.76 +0.7
357,201 - B158DRAFT_0355 0.78 -0.1
357,261 + B158DRAFT_0355 0.84 -0.4
357,261 + B158DRAFT_0355 0.84 -0.6
357,261 + B158DRAFT_0355 0.84 +0.6
357,261 + B158DRAFT_0355 0.84 -0.2
357,269 - B158DRAFT_0355 0.84 -0.8
357,349 - +0.1
357,439 - -0.4
357,510 + -0.2
357,518 - +0.6
357,600 + -1.3
357,600 + -0.9
357,608 - +1.8
357,626 - -0.2
357,626 - +0.7
357,657 + -0.2
357,665 - -0.4
357,694 - B158DRAFT_0356 0.10 +0.3
357,719 + B158DRAFT_0356 0.12 -0.4
357,848 + B158DRAFT_0356 0.18 +1.9
357,882 - B158DRAFT_0356 0.19 +0.2
357,942 + B158DRAFT_0356 0.22 -1.1
357,949 + B158DRAFT_0356 0.22 +0.1
357,950 - B158DRAFT_0356 0.22 +0.9
357,950 - B158DRAFT_0356 0.22 +0.4
357,950 - B158DRAFT_0356 0.22 -1.2
357,957 - B158DRAFT_0356 0.23 +1.9
358,184 - B158DRAFT_0356 0.33 -0.7
358,256 - B158DRAFT_0356 0.37 +0.3
358,266 - B158DRAFT_0356 0.37 -0.9
358,268 + B158DRAFT_0356 0.37 +0.1
358,524 + B158DRAFT_0356 0.49 +0.2
358,568 + B158DRAFT_0356 0.51 +0.0
358,568 + B158DRAFT_0356 0.51 +0.3
358,574 - B158DRAFT_0356 0.51 -1.3
358,659 + B158DRAFT_0356 0.55 -0.7
358,660 - B158DRAFT_0356 0.55 -0.3
358,861 + B158DRAFT_0356 0.65 +0.7
358,869 - B158DRAFT_0356 0.65 +0.7
358,869 - B158DRAFT_0356 0.65 +1.7
358,884 - B158DRAFT_0356 0.66 +2.2
358,885 + B158DRAFT_0356 0.66 -0.3
358,885 + B158DRAFT_0356 0.66 -0.3
358,890 + B158DRAFT_0356 0.66 +0.7
358,903 - B158DRAFT_0356 0.67 -0.9
358,910 + B158DRAFT_0356 0.67 +0.7
358,918 - B158DRAFT_0356 0.67 +0.7
358,944 - B158DRAFT_0356 0.68 -0.9
359,510 + +0.7
359,746 + +0.1
359,746 + -0.7
359,754 - +2.2
359,824 - +0.4
360,001 + -0.9
360,001 + +0.7
360,009 - -1.3
360,009 - -2.0
360,213 + B158DRAFT_0357 0.25 -1.1
360,213 + B158DRAFT_0357 0.25 -1.7
360,213 + B158DRAFT_0357 0.25 -0.1
360,221 - B158DRAFT_0357 0.25 -0.9
360,221 - B158DRAFT_0357 0.25 -1.9
360,274 + B158DRAFT_0357 0.29 -1.9
360,274 + B158DRAFT_0357 0.29 -2.8
360,282 - B158DRAFT_0357 0.30 -2.8
360,320 + B158DRAFT_0357 0.33 -3.3
360,328 - B158DRAFT_0357 0.33 -2.9
360,425 - B158DRAFT_0357 0.41 -1.2
360,425 - B158DRAFT_0357 0.41 -0.7
360,508 + B158DRAFT_0357 0.47 +0.7
360,522 + B158DRAFT_0357 0.48 -2.1
360,524 - B158DRAFT_0357 0.48 -2.0
360,610 - B158DRAFT_0357 0.55 -0.1

Or see this region's nucleotide sequence