Strain Fitness in Escherichia coli BW25113 around b0030
Experiment: hexadecane 5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | hexadecane 5 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 27,340 | - | -0.0 | |||
| 27,394 | - | rihC | b0030 | 0.11 | -0.3 |
| 27,554 | + | rihC | b0030 | 0.29 | -1.2 |
| 27,562 | - | rihC | b0030 | 0.29 | +0.6 |
| 27,623 | - | rihC | b0030 | 0.36 | -0.2 |
| 27,630 | + | rihC | b0030 | 0.37 | +0.3 |
| 27,630 | - | rihC | b0030 | 0.37 | -0.1 |
| 27,693 | - | rihC | b0030 | 0.44 | -1.2 |
| 27,742 | - | rihC | b0030 | 0.49 | +0.3 |
| 27,744 | + | rihC | b0030 | 0.49 | -0.8 |
| 27,769 | + | rihC | b0030 | 0.52 | -3.1 |
| 27,829 | - | rihC | b0030 | 0.59 | +0.7 |
| 27,892 | + | rihC | b0030 | 0.65 | -1.2 |
| 27,900 | - | rihC | b0030 | 0.66 | +0.7 |
| 27,900 | - | rihC | b0030 | 0.66 | -0.6 |
| 27,943 | + | rihC | b0030 | 0.71 | -0.1 |
| 27,943 | + | rihC | b0030 | 0.71 | -1.0 |
| 27,949 | - | rihC | b0030 | 0.72 | -0.7 |
| 28,002 | - | rihC | b0030 | 0.77 | -0.5 |
| 28,020 | - | rihC | b0030 | 0.79 | -0.5 |
| 28,073 | + | rihC | b0030 | 0.85 | +0.0 |
| 28,073 | + | rihC | b0030 | 0.85 | -0.8 |
| 28,240 | - | +1.0 | |||
| 28,259 | + | +0.1 | |||
| 28,259 | + | +0.1 | |||
| 28,323 | + | +1.0 | |||
| 28,323 | + | -0.8 | |||
| 28,379 | - | +0.6 |
Or see this region's nucleotide sequence