Strain Fitness in Pseudomonas simiae WCS417 around PS417_28450
Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Dimethyl Sulfoxide 5 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 6,146,185 | - | +0.2 | |||
| 6,146,461 | - | PS417_28450 | 0.36 | -0.6 | |
| 6,146,538 | - | PS417_28450 | 0.46 | -0.3 | |
| 6,146,722 | - | PS417_28450 | 0.70 | +3.4 | |
| 6,146,722 | - | PS417_28450 | 0.70 | +1.2 | |
| 6,147,036 | + | -0.0 | |||
| 6,147,150 | + | -0.2 | |||
| 6,147,150 | + | -0.8 | |||
| 6,147,150 | + | -1.0 | |||
| 6,147,154 | + | +0.4 | |||
| 6,147,154 | + | +0.9 | |||
| 6,147,155 | - | -0.2 |
Or see this region's nucleotide sequence