Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22675 and PS417_22680 overlap by 11 nucleotides PS417_22680 and PS417_22685 are separated by 136 nucleotides
PS417_22675: PS417_22675 - histidine kinase, at 4,909,999 to 4,911,468
_22675
PS417_22680: PS417_22680 - chemotaxis protein CheY, at 4,911,458 to 4,912,192
_22680
PS417_22685: PS417_22685 - Glucokinase (EC 2.7.1.2) <small>(from data)</small>, at 4,912,329 to 4,913,285
_22685
Position (kb) 4911
4912
4913 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4910.901 kb on - strand, within PS417_22675 at 4911.027 kb on + strand, within PS417_22675 at 4911.063 kb on + strand, within PS417_22675 at 4911.063 kb on + strand, within PS417_22675 at 4911.063 kb on + strand, within PS417_22675 at 4911.063 kb on + strand, within PS417_22675 at 4911.064 kb on - strand, within PS417_22675 at 4911.064 kb on - strand, within PS417_22675 at 4911.064 kb on - strand, within PS417_22675 at 4911.751 kb on + strand, within PS417_22680 at 4911.879 kb on + strand, within PS417_22680 at 4911.879 kb on + strand, within PS417_22680 at 4911.880 kb on - strand, within PS417_22680 at 4911.880 kb on - strand, within PS417_22680 at 4911.880 kb on - strand, within PS417_22680 at 4912.122 kb on + strand at 4912.123 kb on - strand at 4912.123 kb on - strand at 4912.123 kb on - strand at 4912.123 kb on - strand at 4912.178 kb on - strand at 4912.222 kb on + strand at 4912.222 kb on + strand at 4912.222 kb on + strand at 4912.223 kb on - strand at 4912.223 kb on - strand at 4912.223 kb on - strand at 4912.320 kb on + strand at 4912.320 kb on + strand at 4912.331 kb on - strand at 4912.331 kb on - strand at 4912.417 kb on + strand at 4912.470 kb on - strand, within PS417_22685 at 4912.510 kb on + strand, within PS417_22685 at 4912.510 kb on + strand, within PS417_22685 at 4912.510 kb on + strand, within PS417_22685 at 4912.510 kb on + strand, within PS417_22685 at 4912.511 kb on - strand, within PS417_22685 at 4912.511 kb on - strand, within PS417_22685 at 4912.588 kb on - strand, within PS417_22685 at 4912.588 kb on - strand, within PS417_22685 at 4912.688 kb on - strand, within PS417_22685 at 4912.748 kb on + strand, within PS417_22685 at 4912.750 kb on + strand, within PS417_22685 at 4912.750 kb on + strand, within PS417_22685 at 4912.750 kb on + strand, within PS417_22685 at 4912.751 kb on - strand, within PS417_22685 at 4913.152 kb on + strand, within PS417_22685 at 4913.153 kb on - strand, within PS417_22685
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 5 vol% remove 4,910,901 - PS417_22675 0.61 -1.9 4,911,027 + PS417_22675 0.70 -0.0 4,911,063 + PS417_22675 0.72 -0.1 4,911,063 + PS417_22675 0.72 -0.8 4,911,063 + PS417_22675 0.72 -0.6 4,911,063 + PS417_22675 0.72 -0.3 4,911,064 - PS417_22675 0.72 +0.0 4,911,064 - PS417_22675 0.72 +0.4 4,911,064 - PS417_22675 0.72 -0.2 4,911,751 + PS417_22680 0.40 +1.4 4,911,879 + PS417_22680 0.57 -0.9 4,911,879 + PS417_22680 0.57 -0.6 4,911,880 - PS417_22680 0.57 -0.0 4,911,880 - PS417_22680 0.57 -1.0 4,911,880 - PS417_22680 0.57 -0.8 4,912,122 + +0.2 4,912,123 - -0.3 4,912,123 - +2.0 4,912,123 - +1.6 4,912,123 - -0.9 4,912,178 - -1.0 4,912,222 + +0.0 4,912,222 + -0.0 4,912,222 + +0.9 4,912,223 - -0.2 4,912,223 - +0.8 4,912,223 - -1.5 4,912,320 + +0.4 4,912,320 + -0.3 4,912,331 - -0.1 4,912,331 - -0.2 4,912,417 + -1.6 4,912,470 - PS417_22685 0.15 -0.1 4,912,510 + PS417_22685 0.19 +1.0 4,912,510 + PS417_22685 0.19 -0.0 4,912,510 + PS417_22685 0.19 -0.5 4,912,510 + PS417_22685 0.19 -1.6 4,912,511 - PS417_22685 0.19 +0.5 4,912,511 - PS417_22685 0.19 -0.2 4,912,588 - PS417_22685 0.27 +0.3 4,912,588 - PS417_22685 0.27 +0.2 4,912,688 - PS417_22685 0.38 -0.7 4,912,748 + PS417_22685 0.44 +0.4 4,912,750 + PS417_22685 0.44 -0.4 4,912,750 + PS417_22685 0.44 +0.4 4,912,750 + PS417_22685 0.44 -0.0 4,912,751 - PS417_22685 0.44 -0.3 4,913,152 + PS417_22685 0.86 +0.0 4,913,153 - PS417_22685 0.86 +0.3
Or see this region's nucleotide sequence