Strain Fitness in Pseudomonas simiae WCS417 around PS417_19265

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
4,178,464	+		PS417_19255	0.45	+0.9
4,178,465	-		PS417_19255	0.45	-0.7
4,178,516	+		PS417_19255	0.51	-0.2
4,178,658	-		PS417_19255	0.69	-0.5
4,178,733	+		PS417_19255	0.78	-0.8
4,178,750	+		PS417_19255	0.80	+0.5
4,178,860	-				+0.1
4,178,920	-				-0.4
4,178,944	-				-0.5
4,178,944	-				-0.9
4,179,000	-				-0.2
4,179,064	+				-1.4
4,179,162	+				-0.1
4,179,177	-				+0.5
4,179,180	+				+0.3
4,179,181	-				-0.8
4,179,181	-				-0.4
4,179,236	-				-0.4
4,179,322	+				+0.3
4,179,323	-				+0.5
4,179,400	-				+0.9
4,179,580	+				-0.4
4,179,619	+				-0.4
4,179,641	+				+0.9
4,179,850	+		PS417_19265	0.19	+1.5
4,179,970	-		PS417_19265	0.25	-0.5
4,179,970	-		PS417_19265	0.25	-1.2
4,179,970	-		PS417_19265	0.25	-0.3
4,180,021	-		PS417_19265	0.27	-0.4
4,180,134	+		PS417_19265	0.32	-0.6
4,180,326	+		PS417_19265	0.42	-1.2
4,180,326	+		PS417_19265	0.42	-0.8
4,180,326	+		PS417_19265	0.42	-1.5
4,180,327	-		PS417_19265	0.42	+2.2
4,180,851	+		PS417_19265	0.67	-0.5
4,180,851	+		PS417_19265	0.67	-0.3
4,180,852	-				+0.9
4,180,852	-		PS417_19265	0.67	-2.9
4,180,950	+		PS417_19265	0.71	-0.5
4,180,951	-		PS417_19265	0.72	-0.1
4,181,311	-		PS417_19265	0.89	-1.0
4,181,311	-		PS417_19265	0.89	-1.1
4,181,466	+				-0.4
4,181,571	+				-0.8
4,181,571	+				-0.3
4,181,571	+				-0.8
4,181,583	+				-0.9
4,181,583	+				+1.6
4,181,629	+				-0.9
4,181,630	-				+0.4
4,181,764	+				-0.4
4,181,764	+				-0.1
4,181,765	-				-2.4
4,181,774	-				+0.5
4,181,825	+				+0.9
4,181,825	+				-0.4
4,181,907	+		PS417_19270	0.34	-0.7
4,181,962	-		PS417_19270	0.63	-0.4
4,181,962	-		PS417_19270	0.63	+0.1
4,182,044	+				-0.1
4,182,065	+				+0.9
4,182,065	+				+0.8
4,182,066	-				+0.2
4,182,066	-				+0.0
4,182,244	+		PS417_19275	0.27	+0.2
4,182,256	-		PS417_19275	0.29	-0.1