Strain Fitness in Pseudomonas simiae WCS417 around PS417_13930

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
3,060,551	+		PS417_13920	0.69	-0.2
3,060,551	+		PS417_13920	0.69	+0.9
3,060,553	+				-1.2
3,060,553	+		PS417_13920	0.70	-0.1
3,060,553	+		PS417_13920	0.70	-0.2
3,060,554	-		PS417_13920	0.70	+0.0
3,060,554	-		PS417_13920	0.70	+0.0
3,060,554	-		PS417_13920	0.70	+0.3
3,060,563	+		PS417_13920	0.71	+0.2
3,060,563	+				+1.1
3,060,573	+		PS417_13920	0.73	-1.8
3,060,574	-		PS417_13920	0.73	-0.8
3,060,646	+		PS417_13920	0.84	+2.4
3,060,647	-		PS417_13920	0.84	+0.6
3,060,647	-		PS417_13920	0.84	-1.1
3,060,748	-				+0.9
3,060,796	+				-0.5
3,060,796	+				-0.3
3,060,796	+				-0.2
3,060,796	+				+0.0
3,060,796	+				-0.4
3,060,797	-				-1.4
3,060,797	-				-0.4
3,060,802	+				-0.0
3,060,803	-				-0.3
3,060,803	-				+0.0
3,060,803	-				-0.2
3,060,806	+				+0.7
3,060,807	-				+2.4
3,060,807	-				-1.8
3,060,807	-				+0.6
3,060,807	-				-0.4
3,061,153	-		PS417_13925	0.62	+0.1
3,061,153	-		PS417_13925	0.62	-0.5
3,061,153	-		PS417_13925	0.62	+0.0
3,061,153	-		PS417_13925	0.62	-0.8
3,061,166	+		PS417_13925	0.65	+0.7
3,061,167	-		PS417_13925	0.65	-0.1
3,061,329	-				-0.7
3,061,403	+				-0.1
3,061,469	+				+0.3
3,061,470	-				-1.0
3,061,533	+				-0.3
3,061,533	+				-0.3
3,061,534	-				+0.5
3,061,534	-				+2.8
3,061,536	-				-0.8
3,061,539	+				+0.2
3,061,539	+				+0.8
3,061,540	-				-0.1
3,061,540	-				-0.4
3,061,740	+		PS417_13930	0.16	+0.4
3,061,740	+		PS417_13930	0.16	+2.4
3,061,740	+		PS417_13930	0.16	+0.1
3,061,740	+				+0.8
3,061,740	+		PS417_13930	0.16	+0.2
3,061,875	+		PS417_13930	0.26	-0.5
3,061,977	-		PS417_13930	0.33	+0.3
3,061,977	-		PS417_13930	0.33	-0.1
3,061,977	-		PS417_13930	0.33	+1.0
3,061,980	+		PS417_13930	0.33	+0.3
3,061,981	-		PS417_13930	0.33	+0.4
3,061,988	+		PS417_13930	0.34	+0.5
3,062,047	+		PS417_13930	0.38	+0.6
3,062,086	-		PS417_13930	0.41	+0.3
3,062,086	-				-1.5
3,062,138	-		PS417_13930	0.44	-0.5
3,062,175	+		PS417_13930	0.47	+0.5
3,062,175	+		PS417_13930	0.47	+0.8
3,062,176	-		PS417_13930	0.47	-0.5
3,062,176	-		PS417_13930	0.47	-0.2
3,062,211	+		PS417_13930	0.49	+0.3
3,062,259	+		PS417_13930	0.53	+0.2
3,062,260	-		PS417_13930	0.53	+0.1
3,062,260	-				-1.2
3,062,260	-				-0.2
3,062,457	+		PS417_13930	0.67	+0.8
3,062,458	-		PS417_13930	0.67	+5.7
3,062,595	+		PS417_13930	0.76	+0.5
3,062,691	+		PS417_13930	0.83	-0.2
3,062,691	+		PS417_13930	0.83	+0.1
3,062,691	+		PS417_13930	0.83	+0.3
3,062,692	-		PS417_13930	0.83	-0.4
3,062,692	-		PS417_13930	0.83	+0.9
3,062,866	-				+0.5
3,063,143	-				-0.8
3,063,176	+				+0.5
3,063,182	+				-0.6
3,063,201	-				+0.1
3,063,201	-				+0.0
3,063,355	+		PS417_13940	0.17	+0.4
3,063,355	+		PS417_13940	0.17	-0.3
3,063,356	-		PS417_13940	0.18	+0.1
3,063,356	-		PS417_13940	0.18	+0.5
3,063,480	+		PS417_13940	0.36	-0.5
3,063,615	+		PS417_13940	0.55	-0.1
3,063,715	+				-0.8
3,063,715	+		PS417_13940	0.70	+0.2
3,063,716	-		PS417_13940	0.70	+0.3
3,063,716	-				+0.8
3,063,716	-		PS417_13940	0.70	+0.3