Strain Fitness in Pseudomonas simiae WCS417 around PS417_12270

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
2,664,364	-		PS417_12260	0.77	-0.2
2,664,364	-		PS417_12260	0.77	-0.0
2,664,407	+				-2.2
2,664,408	-				-0.4
2,664,408	-				-0.1
2,664,408	-				-0.2
2,664,440	-				-0.3
2,664,448	+				+0.2
2,664,448	+				-0.0
2,664,448	+				-0.2
2,664,448	+				-0.2
2,664,483	-				-0.8
2,664,483	-				-0.1
2,664,487	+				+0.1
2,664,488	-				-1.2
2,664,488	-				-0.2
2,664,491	+				+0.4
2,664,507	+				+0.2
2,664,508	-				+0.5
2,664,543	+				+0.1
2,664,544	-				+0.2
2,664,570	-				-1.2
2,664,605	+				+0.2
2,664,605	+				+0.8
2,664,605	+				-0.6
2,664,607	+				+0.2
2,664,608	-				-0.3
2,664,611	+				+0.9
2,664,612	-				+0.1
2,664,612	-				+0.6
2,664,709	-		PS417_12265	0.11	-0.2
2,664,787	+		PS417_12265	0.25	-0.8
2,664,787	+		PS417_12265	0.25	-0.2
2,664,798	+		PS417_12265	0.27	-0.3
2,664,827	-		PS417_12265	0.32	+0.1
2,664,827	-		PS417_12265	0.32	-0.0
2,664,887	-		PS417_12265	0.43	+0.4
2,665,161	+				-0.2
2,665,161	+				-0.9
2,665,161	+				-0.5
2,665,162	-				-0.2
2,665,171	+				-0.0
2,665,171	+				-0.5
2,665,264	+				-0.7
2,665,264	+				+0.3
2,665,380	+				-0.8
2,665,380	+				-0.3
2,665,380	+				-0.9
2,665,381	-				-0.7
2,665,382	+				-1.2
2,665,382	+				-0.4
2,665,382	+				+0.0
2,665,383	-				-0.8
2,665,859	+		PS417_12270	0.32	-1.5
2,665,946	+		PS417_12270	0.37	-0.6
2,665,946	+		PS417_12270	0.37	-1.4
2,665,947	-		PS417_12270	0.37	-0.2
2,665,947	-				-0.8
2,666,341	+		PS417_12270	0.60	-0.2
2,667,181	-				-0.2
2,667,191	+				+0.8
2,667,411	+		PS417_12275	0.24	-1.2
2,667,412	-		PS417_12275	0.24	+0.2
2,667,505	+		PS417_12275	0.32	+1.0
2,667,506	-		PS417_12275	0.32	+0.8
2,667,824	-		PS417_12275	0.58	+0.2