Strain Fitness in Pseudomonas simiae WCS417 around PS417_08025

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
1,754,777	+		PS417_08020	0.41	+0.1
1,754,778	-		PS417_08020	0.41	-0.5
1,754,795	-		PS417_08020	0.43	-0.8
1,754,795	-		PS417_08020	0.43	+0.2
1,754,935	+		PS417_08020	0.59	-0.0
1,754,936	-		PS417_08020	0.59	-0.8
1,754,984	+		PS417_08020	0.64	+0.0
1,754,984	+		PS417_08020	0.64	-0.2
1,754,985	-		PS417_08020	0.64	-1.0
1,755,112	+		PS417_08020	0.78	-1.6
1,755,115	+		PS417_08020	0.79	+0.5
1,755,198	+		PS417_08020	0.88	-0.0
1,755,198	+		PS417_08020	0.88	-0.1
1,755,199	-		PS417_08020	0.88	-0.3
1,755,199	-		PS417_08020	0.88	-0.1
1,755,199	-		PS417_08020	0.88	-1.3
1,755,199	-		PS417_08020	0.88	-2.1
1,755,199	-		PS417_08020	0.88	-1.4
1,755,221	+				+0.1
1,755,439	-				-1.5
1,755,439	-				-0.4
1,755,439	-				-0.3
1,755,439	-				+1.0
1,755,439	-				-0.1
1,755,439	-				-1.9
1,755,485	-				+0.1
1,755,507	+				-0.5
1,755,507	+				-0.3
1,755,725	+		PS417_08025	0.27	-2.2
1,755,887	-		PS417_08025	0.41	-1.5
1,756,211	+		PS417_08025	0.68	-1.7
1,756,775	-		PS417_08030	0.23	-0.2
1,756,870	+		PS417_08030	0.33	+0.8
1,757,096	+		PS417_08030	0.58	-0.4
1,757,096	+		PS417_08030	0.58	-0.8
1,757,097	-		PS417_08030	0.58	-0.6
1,757,380	-		PS417_08030	0.89	-0.0
1,757,382	-		PS417_08030	0.89	+0.1
1,757,382	-		PS417_08030	0.89	-0.6
1,757,382	-		PS417_08030	0.89	+0.5