Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2047

Experiment: Kang_ML4_MIT diversity barseq

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2046 and B158DRAFT_2047 are separated by 246 nucleotidesB158DRAFT_2047 and B158DRAFT_2048 are separated by 205 nucleotides B158DRAFT_2046: B158DRAFT_2046 - Zn-dependent alcohol dehydrogenases, at 179,159 to 180,205 _2046 B158DRAFT_2047: B158DRAFT_2047 - ATP-dependent RNA helicase DbpA (EC 5.99.1.-), at 180,452 to 181,834 _2047 B158DRAFT_2048: B158DRAFT_2048 - Uncharacterized conserved protein, at 182,040 to 182,711 _2048 Position (kb) 180 181 182Strain fitness (log2 ratio) -2 -1 0 1at 179.462 kb on + strand, within B158DRAFT_2046at 179.486 kb on + strand, within B158DRAFT_2046at 179.494 kb on - strand, within B158DRAFT_2046at 179.498 kb on + strand, within B158DRAFT_2046at 179.498 kb on + strand, within B158DRAFT_2046at 179.506 kb on - strand, within B158DRAFT_2046at 179.506 kb on - strand, within B158DRAFT_2046at 179.506 kb on - strand, within B158DRAFT_2046at 179.533 kb on + strand, within B158DRAFT_2046at 179.621 kb on + strand, within B158DRAFT_2046at 179.629 kb on - strand, within B158DRAFT_2046at 179.727 kb on + strand, within B158DRAFT_2046at 179.735 kb on - strand, within B158DRAFT_2046at 179.737 kb on + strand, within B158DRAFT_2046at 179.737 kb on + strand, within B158DRAFT_2046at 179.737 kb on + strand, within B158DRAFT_2046at 179.740 kb on - strand, within B158DRAFT_2046at 179.751 kb on + strand, within B158DRAFT_2046at 179.788 kb on + strand, within B158DRAFT_2046at 179.796 kb on - strand, within B158DRAFT_2046at 179.796 kb on - strand, within B158DRAFT_2046at 179.830 kb on - strand, within B158DRAFT_2046at 179.876 kb on - strand, within B158DRAFT_2046at 179.915 kb on - strand, within B158DRAFT_2046at 179.938 kb on + strand, within B158DRAFT_2046at 179.975 kb on + strand, within B158DRAFT_2046at 180.004 kb on - strand, within B158DRAFT_2046at 180.024 kb on - strand, within B158DRAFT_2046at 180.124 kb on - strandat 180.212 kb on - strandat 180.227 kb on - strandat 180.227 kb on - strandat 180.233 kb on + strandat 180.233 kb on + strandat 180.241 kb on - strandat 180.243 kb on + strandat 180.246 kb on - strandat 180.246 kb on - strandat 180.246 kb on - strandat 180.329 kb on + strandat 180.329 kb on + strandat 180.329 kb on + strandat 180.329 kb on + strandat 180.329 kb on + strandat 180.337 kb on - strandat 180.337 kb on - strandat 180.337 kb on - strandat 180.337 kb on - strandat 180.337 kb on - strandat 180.337 kb on - strandat 180.345 kb on - strandat 180.348 kb on + strandat 180.356 kb on - strandat 180.358 kb on + strandat 180.383 kb on + strandat 180.391 kb on - strandat 180.391 kb on - strandat 180.391 kb on - strandat 180.391 kb on - strandat 180.391 kb on - strandat 180.391 kb on - strandat 180.393 kb on + strandat 180.393 kb on + strandat 180.393 kb on + strandat 180.393 kb on + strandat 180.393 kb on + strandat 180.401 kb on - strandat 180.401 kb on - strandat 180.401 kb on - strandat 180.401 kb on - strandat 180.401 kb on - strandat 180.421 kb on - strandat 180.487 kb on + strandat 180.512 kb on + strandat 180.512 kb on + strandat 180.572 kb on + strandat 180.592 kb on + strand, within B158DRAFT_2047at 180.592 kb on + strand, within B158DRAFT_2047at 180.592 kb on + strand, within B158DRAFT_2047at 180.592 kb on + strand, within B158DRAFT_2047at 180.592 kb on + strand, within B158DRAFT_2047at 180.592 kb on + strand, within B158DRAFT_2047at 180.592 kb on + strand, within B158DRAFT_2047at 180.592 kb on + strand, within B158DRAFT_2047at 180.592 kb on + strand, within B158DRAFT_2047at 180.592 kb on + strand, within B158DRAFT_2047at 180.600 kb on - strand, within B158DRAFT_2047at 180.600 kb on - strand, within B158DRAFT_2047at 180.600 kb on - strand, within B158DRAFT_2047at 180.600 kb on - strand, within B158DRAFT_2047at 180.600 kb on - strand, within B158DRAFT_2047at 180.600 kb on - strand, within B158DRAFT_2047at 180.682 kb on + strand, within B158DRAFT_2047at 180.685 kb on - strand, within B158DRAFT_2047at 180.727 kb on - strand, within B158DRAFT_2047at 180.762 kb on - strand, within B158DRAFT_2047at 180.777 kb on + strand, within B158DRAFT_2047at 180.779 kb on + strand, within B158DRAFT_2047at 180.779 kb on + strand, within B158DRAFT_2047at 180.779 kb on + strand, within B158DRAFT_2047at 180.785 kb on + strand, within B158DRAFT_2047at 180.785 kb on + strand, within B158DRAFT_2047at 180.793 kb on - strand, within B158DRAFT_2047at 180.793 kb on - strand, within B158DRAFT_2047at 180.793 kb on - strand, within B158DRAFT_2047at 180.807 kb on + strand, within B158DRAFT_2047at 180.849 kb on + strand, within B158DRAFT_2047at 180.857 kb on - strand, within B158DRAFT_2047at 180.908 kb on - strand, within B158DRAFT_2047at 180.910 kb on + strand, within B158DRAFT_2047at 180.920 kb on + strand, within B158DRAFT_2047at 180.950 kb on + strand, within B158DRAFT_2047at 180.995 kb on + strand, within B158DRAFT_2047at 181.003 kb on - strand, within B158DRAFT_2047at 181.003 kb on - strand, within B158DRAFT_2047at 181.003 kb on - strand, within B158DRAFT_2047at 181.003 kb on - strand, within B158DRAFT_2047at 181.003 kb on - strand, within B158DRAFT_2047at 181.014 kb on + strand, within B158DRAFT_2047at 181.022 kb on - strand, within B158DRAFT_2047at 181.022 kb on - strand, within B158DRAFT_2047at 181.085 kb on + strand, within B158DRAFT_2047at 181.093 kb on + strand, within B158DRAFT_2047at 181.101 kb on - strand, within B158DRAFT_2047at 181.103 kb on + strand, within B158DRAFT_2047at 181.304 kb on + strand, within B158DRAFT_2047at 181.347 kb on + strand, within B158DRAFT_2047at 181.412 kb on - strand, within B158DRAFT_2047at 181.419 kb on + strand, within B158DRAFT_2047at 181.419 kb on + strand, within B158DRAFT_2047at 181.419 kb on + strand, within B158DRAFT_2047at 181.427 kb on + strand, within B158DRAFT_2047at 181.427 kb on - strand, within B158DRAFT_2047at 181.427 kb on - strand, within B158DRAFT_2047at 181.444 kb on + strand, within B158DRAFT_2047at 181.444 kb on + strand, within B158DRAFT_2047at 181.472 kb on + strand, within B158DRAFT_2047at 181.472 kb on + strand, within B158DRAFT_2047at 181.490 kb on - strand, within B158DRAFT_2047at 181.663 kb on - strand, within B158DRAFT_2047at 181.729 kb on + strandat 181.929 kb on + strandat 181.930 kb on + strandat 181.938 kb on - strandat 181.969 kb on - strandat 182.106 kb on - strandat 182.110 kb on + strand, within B158DRAFT_2048at 182.110 kb on + strand, within B158DRAFT_2048at 182.115 kb on + strand, within B158DRAFT_2048at 182.249 kb on - strand, within B158DRAFT_2048at 182.273 kb on + strand, within B158DRAFT_2048at 182.372 kb on - strand, within B158DRAFT_2048at 182.373 kb on - strand, within B158DRAFT_2048at 182.383 kb on - strand, within B158DRAFT_2048at 182.438 kb on + strand, within B158DRAFT_2048at 182.438 kb on + strand, within B158DRAFT_2048at 182.438 kb on + strand, within B158DRAFT_2048at 182.441 kb on - strand, within B158DRAFT_2048at 182.446 kb on - strand, within B158DRAFT_2048at 182.446 kb on - strand, within B158DRAFT_2048at 182.446 kb on - strand, within B158DRAFT_2048at 182.457 kb on + strand, within B158DRAFT_2048at 182.483 kb on + strand, within B158DRAFT_2048at 182.483 kb on + strand, within B158DRAFT_2048at 182.504 kb on + strand, within B158DRAFT_2048at 182.504 kb on + strand, within B158DRAFT_2048at 182.512 kb on - strand, within B158DRAFT_2048at 182.512 kb on - strand, within B158DRAFT_2048at 182.512 kb on - strand, within B158DRAFT_2048at 182.606 kb on + strand, within B158DRAFT_2048at 182.606 kb on + strand, within B158DRAFT_2048at 182.606 kb on + strand, within B158DRAFT_2048at 182.606 kb on + strand, within B158DRAFT_2048at 182.614 kb on - strand, within B158DRAFT_2048at 182.614 kb on - strand, within B158DRAFT_2048at 182.614 kb on - strand, within B158DRAFT_2048at 182.614 kb on - strand, within B158DRAFT_2048at 182.647 kb on + strandat 182.671 kb on + strandat 182.725 kb on - strandat 182.735 kb on - strandat 182.770 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Kang_ML4_MIT diversity barseq
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179,462 + B158DRAFT_2046 0.29 +0.9
179,486 + B158DRAFT_2046 0.31 -0.8
179,494 - B158DRAFT_2046 0.32 +0.3
179,498 + B158DRAFT_2046 0.32 +0.3
179,498 + B158DRAFT_2046 0.32 -0.2
179,506 - B158DRAFT_2046 0.33 +0.3
179,506 - B158DRAFT_2046 0.33 -1.0
179,506 - B158DRAFT_2046 0.33 +0.0
179,533 + B158DRAFT_2046 0.36 +0.5
179,621 + B158DRAFT_2046 0.44 -0.1
179,629 - B158DRAFT_2046 0.45 +0.2
179,727 + B158DRAFT_2046 0.54 -0.3
179,735 - B158DRAFT_2046 0.55 -0.3
179,737 + B158DRAFT_2046 0.55 -0.8
179,737 + B158DRAFT_2046 0.55 -0.1
179,737 + B158DRAFT_2046 0.55 +0.6
179,740 - B158DRAFT_2046 0.55 -1.1
179,751 + B158DRAFT_2046 0.57 -0.6
179,788 + B158DRAFT_2046 0.60 -0.9
179,796 - B158DRAFT_2046 0.61 -0.0
179,796 - B158DRAFT_2046 0.61 -0.7
179,830 - B158DRAFT_2046 0.64 -0.4
179,876 - B158DRAFT_2046 0.68 +0.2
179,915 - B158DRAFT_2046 0.72 -0.8
179,938 + B158DRAFT_2046 0.74 +0.0
179,975 + B158DRAFT_2046 0.78 +0.3
180,004 - B158DRAFT_2046 0.81 -0.1
180,024 - B158DRAFT_2046 0.83 -0.1
180,124 - +0.6
180,212 - +0.7
180,227 - -0.3
180,227 - -0.1
180,233 + -0.7
180,233 + -0.6
180,241 - -1.6
180,243 + -0.3
180,246 - +0.1
180,246 - +0.1
180,246 - +0.1
180,329 + -0.5
180,329 + -0.4
180,329 + -0.0
180,329 + -0.2
180,329 + -0.7
180,337 - +0.6
180,337 - +0.3
180,337 - -0.0
180,337 - -0.5
180,337 - -0.9
180,337 - +0.3
180,345 - -0.1
180,348 + -0.3
180,356 - +0.5
180,358 + +0.9
180,383 + +0.2
180,391 - -0.1
180,391 - +0.7
180,391 - -0.1
180,391 - +0.4
180,391 - -0.5
180,391 - -0.5
180,393 + +0.5
180,393 + -0.0
180,393 + +0.4
180,393 + +0.1
180,393 + +0.0
180,401 - +0.3
180,401 - -0.3
180,401 - -0.4
180,401 - +0.7
180,401 - +0.3
180,421 - -0.6
180,487 + +0.3
180,512 + -0.6
180,512 + -0.2
180,572 + -0.3
180,592 + B158DRAFT_2047 0.10 +0.3
180,592 + B158DRAFT_2047 0.10 -0.8
180,592 + B158DRAFT_2047 0.10 +0.1
180,592 + B158DRAFT_2047 0.10 -0.2
180,592 + B158DRAFT_2047 0.10 +0.1
180,592 + B158DRAFT_2047 0.10 +0.3
180,592 + B158DRAFT_2047 0.10 +0.1
180,592 + B158DRAFT_2047 0.10 +0.0
180,592 + B158DRAFT_2047 0.10 -0.9
180,592 + B158DRAFT_2047 0.10 -0.6
180,600 - B158DRAFT_2047 0.11 -1.3
180,600 - B158DRAFT_2047 0.11 -0.0
180,600 - B158DRAFT_2047 0.11 +0.1
180,600 - B158DRAFT_2047 0.11 +0.0
180,600 - B158DRAFT_2047 0.11 +0.2
180,600 - B158DRAFT_2047 0.11 -0.1
180,682 + B158DRAFT_2047 0.17 -0.6
180,685 - B158DRAFT_2047 0.17 -0.0
180,727 - B158DRAFT_2047 0.20 -1.2
180,762 - B158DRAFT_2047 0.22 +0.1
180,777 + B158DRAFT_2047 0.23 -0.2
180,779 + B158DRAFT_2047 0.24 -0.1
180,779 + B158DRAFT_2047 0.24 +0.3
180,779 + B158DRAFT_2047 0.24 +0.1
180,785 + B158DRAFT_2047 0.24 +0.2
180,785 + B158DRAFT_2047 0.24 +0.6
180,793 - B158DRAFT_2047 0.25 -0.1
180,793 - B158DRAFT_2047 0.25 +0.3
180,793 - B158DRAFT_2047 0.25 -0.1
180,807 + B158DRAFT_2047 0.26 +0.2
180,849 + B158DRAFT_2047 0.29 +1.6
180,857 - B158DRAFT_2047 0.29 +0.1
180,908 - B158DRAFT_2047 0.33 +0.2
180,910 + B158DRAFT_2047 0.33 -0.3
180,920 + B158DRAFT_2047 0.34 +0.4
180,950 + B158DRAFT_2047 0.36 -0.3
180,995 + B158DRAFT_2047 0.39 -0.0
181,003 - B158DRAFT_2047 0.40 -0.6
181,003 - B158DRAFT_2047 0.40 -0.2
181,003 - B158DRAFT_2047 0.40 -0.1
181,003 - B158DRAFT_2047 0.40 -0.4
181,003 - B158DRAFT_2047 0.40 -0.3
181,014 + B158DRAFT_2047 0.41 -0.6
181,022 - B158DRAFT_2047 0.41 +1.5
181,022 - B158DRAFT_2047 0.41 +0.3
181,085 + B158DRAFT_2047 0.46 -0.3
181,093 + B158DRAFT_2047 0.46 +0.1
181,101 - B158DRAFT_2047 0.47 -0.1
181,103 + B158DRAFT_2047 0.47 -0.1
181,304 + B158DRAFT_2047 0.62 -0.5
181,347 + B158DRAFT_2047 0.65 +0.5
181,412 - B158DRAFT_2047 0.69 -0.4
181,419 + B158DRAFT_2047 0.70 +0.1
181,419 + B158DRAFT_2047 0.70 -0.1
181,419 + B158DRAFT_2047 0.70 +0.2
181,427 + B158DRAFT_2047 0.70 +0.4
181,427 - B158DRAFT_2047 0.70 -0.5
181,427 - B158DRAFT_2047 0.70 +0.3
181,444 + B158DRAFT_2047 0.72 -0.0
181,444 + B158DRAFT_2047 0.72 -0.1
181,472 + B158DRAFT_2047 0.74 -0.5
181,472 + B158DRAFT_2047 0.74 -0.4
181,490 - B158DRAFT_2047 0.75 -0.9
181,663 - B158DRAFT_2047 0.88 +0.1
181,729 + -0.1
181,929 + +0.6
181,930 + -0.3
181,938 - -0.6
181,969 - -0.7
182,106 - +0.4
182,110 + B158DRAFT_2048 0.10 +0.5
182,110 + B158DRAFT_2048 0.10 +0.3
182,115 + B158DRAFT_2048 0.11 -0.5
182,249 - B158DRAFT_2048 0.31 -0.5
182,273 + B158DRAFT_2048 0.35 -0.0
182,372 - B158DRAFT_2048 0.49 +0.6
182,373 - B158DRAFT_2048 0.50 -0.5
182,383 - B158DRAFT_2048 0.51 -0.6
182,438 + B158DRAFT_2048 0.59 -0.4
182,438 + B158DRAFT_2048 0.59 +0.5
182,438 + B158DRAFT_2048 0.59 -0.7
182,441 - B158DRAFT_2048 0.60 -0.6
182,446 - B158DRAFT_2048 0.60 -0.5
182,446 - B158DRAFT_2048 0.60 -0.5
182,446 - B158DRAFT_2048 0.60 -0.4
182,457 + B158DRAFT_2048 0.62 +0.1
182,483 + B158DRAFT_2048 0.66 -0.3
182,483 + B158DRAFT_2048 0.66 -0.4
182,504 + B158DRAFT_2048 0.69 -0.0
182,504 + B158DRAFT_2048 0.69 -0.5
182,512 - B158DRAFT_2048 0.70 -0.3
182,512 - B158DRAFT_2048 0.70 +0.3
182,512 - B158DRAFT_2048 0.70 +0.7
182,606 + B158DRAFT_2048 0.84 -1.9
182,606 + B158DRAFT_2048 0.84 -0.4
182,606 + B158DRAFT_2048 0.84 +0.7
182,606 + B158DRAFT_2048 0.84 +0.5
182,614 - B158DRAFT_2048 0.85 +0.1
182,614 - B158DRAFT_2048 0.85 +0.0
182,614 - B158DRAFT_2048 0.85 -0.5
182,614 - B158DRAFT_2048 0.85 -1.4
182,647 + -0.8
182,671 + +0.0
182,725 - -0.7
182,735 - +0.1
182,770 - -0.7

Or see this region's nucleotide sequence