Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0892

Experiment: Kang_ML4_MIT diversity barseq

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0891 and B158DRAFT_0892 are separated by 40 nucleotidesB158DRAFT_0892 and B158DRAFT_0893 are separated by 47 nucleotidesB158DRAFT_0893 and B158DRAFT_0894 are separated by 48 nucleotides B158DRAFT_0891: B158DRAFT_0891 - ABC-type uncharacterized transport system, permease component, at 911,287 to 913,527 _0891 B158DRAFT_0892: B158DRAFT_0892 - phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1), at 913,568 to 915,175 _0892 B158DRAFT_0893: B158DRAFT_0893 - phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1), at 915,223 to 916,074 _0893 B158DRAFT_0894: B158DRAFT_0894 - phosphate uptake regulator, PhoU, at 916,123 to 916,854 _0894 Position (kb) 913 914 915 916Strain fitness (log2 ratio) -2 -1 0 1 2 3at 912.895 kb on - strand, within B158DRAFT_0891at 913.058 kb on + strand, within B158DRAFT_0891at 913.066 kb on - strand, within B158DRAFT_0891at 913.066 kb on - strand, within B158DRAFT_0891at 913.066 kb on - strand, within B158DRAFT_0891at 913.076 kb on + strand, within B158DRAFT_0891at 913.081 kb on - strand, within B158DRAFT_0891at 913.207 kb on + strand, within B158DRAFT_0891at 913.207 kb on + strand, within B158DRAFT_0891at 913.207 kb on + strand, within B158DRAFT_0891at 913.438 kb on + strandat 913.439 kb on + strandat 913.690 kb on + strandat 913.934 kb on + strand, within B158DRAFT_0892at 914.097 kb on + strand, within B158DRAFT_0892at 914.138 kb on + strand, within B158DRAFT_0892at 914.146 kb on - strand, within B158DRAFT_0892at 914.149 kb on + strand, within B158DRAFT_0892at 914.230 kb on + strand, within B158DRAFT_0892at 914.238 kb on - strand, within B158DRAFT_0892at 914.598 kb on + strand, within B158DRAFT_0892at 914.652 kb on - strand, within B158DRAFT_0892at 914.656 kb on + strand, within B158DRAFT_0892at 914.664 kb on - strand, within B158DRAFT_0892at 914.717 kb on + strand, within B158DRAFT_0892at 914.725 kb on - strand, within B158DRAFT_0892at 914.725 kb on - strand, within B158DRAFT_0892at 915.048 kb on - strandat 915.080 kb on + strandat 915.080 kb on + strandat 915.162 kb on - strandat 915.206 kb on + strandat 915.206 kb on + strandat 915.508 kb on + strand, within B158DRAFT_0893at 915.707 kb on + strand, within B158DRAFT_0893at 915.712 kb on + strand, within B158DRAFT_0893at 916.077 kb on - strandat 916.079 kb on + strandat 916.087 kb on - strandat 916.092 kb on - strandat 916.154 kb on + strandat 916.164 kb on + strandat 916.172 kb on - strandat 916.172 kb on - strandat 916.172 kb on - strandat 916.172 kb on - strandat 916.172 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Kang_ML4_MIT diversity barseq
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912,895 - B158DRAFT_0891 0.72 -0.5
913,058 + B158DRAFT_0891 0.79 +0.0
913,066 - B158DRAFT_0891 0.79 +1.5
913,066 - B158DRAFT_0891 0.79 +1.0
913,066 - B158DRAFT_0891 0.79 +1.0
913,076 + B158DRAFT_0891 0.80 +1.0
913,081 - B158DRAFT_0891 0.80 +1.0
913,207 + B158DRAFT_0891 0.86 +2.4
913,207 + B158DRAFT_0891 0.86 +1.0
913,207 + B158DRAFT_0891 0.86 +1.3
913,438 + +0.3
913,439 + +0.3
913,690 + +0.5
913,934 + B158DRAFT_0892 0.23 +2.8
914,097 + B158DRAFT_0892 0.33 +3.0
914,138 + B158DRAFT_0892 0.35 +0.8
914,146 - B158DRAFT_0892 0.36 +0.4
914,149 + B158DRAFT_0892 0.36 +2.0
914,230 + B158DRAFT_0892 0.41 +1.8
914,238 - B158DRAFT_0892 0.42 +0.4
914,598 + B158DRAFT_0892 0.64 +0.4
914,652 - B158DRAFT_0892 0.67 +0.0
914,656 + B158DRAFT_0892 0.68 -0.8
914,664 - B158DRAFT_0892 0.68 -0.6
914,717 + B158DRAFT_0892 0.71 +0.4
914,725 - B158DRAFT_0892 0.72 +1.0
914,725 - B158DRAFT_0892 0.72 +0.8
915,048 - +0.6
915,080 + +0.0
915,080 + +1.0
915,162 - +0.6
915,206 + +0.1
915,206 + -0.4
915,508 + B158DRAFT_0893 0.33 +0.2
915,707 + B158DRAFT_0893 0.57 -2.3
915,712 + B158DRAFT_0893 0.57 +1.0
916,077 - -0.2
916,079 + +0.2
916,087 - -1.0
916,092 - +1.0
916,154 + +0.1
916,164 + +0.2
916,172 - +3.3
916,172 - +0.4
916,172 - -1.3
916,172 - +0.0
916,172 - +0.9

Or see this region's nucleotide sequence