Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0891

Experiment: Kang_ML4_MIT diversity barseq

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0890 and B158DRAFT_0891 are separated by 248 nucleotidesB158DRAFT_0891 and B158DRAFT_0892 are separated by 40 nucleotides B158DRAFT_0890: B158DRAFT_0890 - Phosphate-selective porin, at 909,902 to 911,038 _0890 B158DRAFT_0891: B158DRAFT_0891 - ABC-type uncharacterized transport system, permease component, at 911,287 to 913,527 _0891 B158DRAFT_0892: B158DRAFT_0892 - phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1), at 913,568 to 915,175 _0892 Position (kb) 911 912 913 914Strain fitness (log2 ratio) -1 0 1 2 3 4at 910.456 kb on + strand, within B158DRAFT_0890at 910.731 kb on + strand, within B158DRAFT_0890at 910.731 kb on + strand, within B158DRAFT_0890at 910.912 kb on - strand, within B158DRAFT_0890at 910.997 kb on + strandat 911.328 kb on - strandat 911.398 kb on - strandat 911.398 kb on - strandat 911.537 kb on - strand, within B158DRAFT_0891at 911.807 kb on + strand, within B158DRAFT_0891at 911.807 kb on + strand, within B158DRAFT_0891at 911.807 kb on + strand, within B158DRAFT_0891at 911.815 kb on - strand, within B158DRAFT_0891at 911.815 kb on - strand, within B158DRAFT_0891at 911.815 kb on - strand, within B158DRAFT_0891at 911.815 kb on - strand, within B158DRAFT_0891at 911.815 kb on - strand, within B158DRAFT_0891at 912.165 kb on - strand, within B158DRAFT_0891at 912.207 kb on - strand, within B158DRAFT_0891at 912.207 kb on - strand, within B158DRAFT_0891at 912.230 kb on + strand, within B158DRAFT_0891at 912.230 kb on + strand, within B158DRAFT_0891at 912.238 kb on - strand, within B158DRAFT_0891at 912.319 kb on - strand, within B158DRAFT_0891at 912.530 kb on + strand, within B158DRAFT_0891at 912.895 kb on - strand, within B158DRAFT_0891at 913.058 kb on + strand, within B158DRAFT_0891at 913.066 kb on - strand, within B158DRAFT_0891at 913.066 kb on - strand, within B158DRAFT_0891at 913.066 kb on - strand, within B158DRAFT_0891at 913.076 kb on + strand, within B158DRAFT_0891at 913.081 kb on - strand, within B158DRAFT_0891at 913.207 kb on + strand, within B158DRAFT_0891at 913.207 kb on + strand, within B158DRAFT_0891at 913.207 kb on + strand, within B158DRAFT_0891at 913.438 kb on + strandat 913.439 kb on + strandat 913.690 kb on + strandat 913.934 kb on + strand, within B158DRAFT_0892at 914.097 kb on + strand, within B158DRAFT_0892at 914.138 kb on + strand, within B158DRAFT_0892at 914.146 kb on - strand, within B158DRAFT_0892at 914.149 kb on + strand, within B158DRAFT_0892at 914.230 kb on + strand, within B158DRAFT_0892at 914.238 kb on - strand, within B158DRAFT_0892

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Per-strain Table

Position Strand Gene LocusTag Fraction Kang_ML4_MIT diversity barseq
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910,456 + B158DRAFT_0890 0.49 +3.8
910,731 + B158DRAFT_0890 0.73 +2.6
910,731 + B158DRAFT_0890 0.73 +2.6
910,912 - B158DRAFT_0890 0.89 +3.0
910,997 + +2.3
911,328 - +1.3
911,398 - +1.6
911,398 - +3.3
911,537 - B158DRAFT_0891 0.11 +3.0
911,807 + B158DRAFT_0891 0.23 -0.6
911,807 + B158DRAFT_0891 0.23 -0.3
911,807 + B158DRAFT_0891 0.23 +1.6
911,815 - B158DRAFT_0891 0.24 +2.6
911,815 - B158DRAFT_0891 0.24 -0.6
911,815 - B158DRAFT_0891 0.24 -1.3
911,815 - B158DRAFT_0891 0.24 -1.0
911,815 - B158DRAFT_0891 0.24 +0.3
912,165 - B158DRAFT_0891 0.39 +1.0
912,207 - B158DRAFT_0891 0.41 +3.6
912,207 - B158DRAFT_0891 0.41 -0.3
912,230 + B158DRAFT_0891 0.42 +0.7
912,230 + B158DRAFT_0891 0.42 +1.2
912,238 - B158DRAFT_0891 0.42 +1.5
912,319 - B158DRAFT_0891 0.46 +1.0
912,530 + B158DRAFT_0891 0.55 +0.8
912,895 - B158DRAFT_0891 0.72 -0.5
913,058 + B158DRAFT_0891 0.79 +0.0
913,066 - B158DRAFT_0891 0.79 +1.5
913,066 - B158DRAFT_0891 0.79 +1.0
913,066 - B158DRAFT_0891 0.79 +1.0
913,076 + B158DRAFT_0891 0.80 +1.0
913,081 - B158DRAFT_0891 0.80 +1.0
913,207 + B158DRAFT_0891 0.86 +2.4
913,207 + B158DRAFT_0891 0.86 +1.0
913,207 + B158DRAFT_0891 0.86 +1.3
913,438 + +0.3
913,439 + +0.3
913,690 + +0.5
913,934 + B158DRAFT_0892 0.23 +2.8
914,097 + B158DRAFT_0892 0.33 +3.0
914,138 + B158DRAFT_0892 0.35 +0.8
914,146 - B158DRAFT_0892 0.36 +0.4
914,149 + B158DRAFT_0892 0.36 +2.0
914,230 + B158DRAFT_0892 0.41 +1.8
914,238 - B158DRAFT_0892 0.42 +0.4

Or see this region's nucleotide sequence