Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0417

Experiment: Kang_ML4_MIT diversity barseq

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0415 and B158DRAFT_0416 are separated by 173 nucleotidesB158DRAFT_0416 and B158DRAFT_0417 are separated by 75 nucleotidesB158DRAFT_0417 and B158DRAFT_0418 are separated by 11 nucleotidesB158DRAFT_0418 and B158DRAFT_0419 are separated by 20 nucleotides B158DRAFT_0415: B158DRAFT_0415 - transcription termination factor Rho, at 418,269 to 419,525 _0415 B158DRAFT_0416: B158DRAFT_0416 - hypothetical protein, at 419,699 to 420,301 _0416 B158DRAFT_0417: B158DRAFT_0417 - UbiD family decarboxylases, at 420,377 to 421,864 _0417 B158DRAFT_0418: B158DRAFT_0418 - 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases, at 421,876 to 422,625 _0418 B158DRAFT_0419: B158DRAFT_0419 - 3-oxoacyl-(acyl-carrier-protein) synthase, at 422,646 to 423,863 _0419 Position (kb) 420 421 422Strain fitness (log2 ratio) -1 0 1 2 3at 419.575 kb on + strandat 419.577 kb on + strandat 419.610 kb on + strandat 419.616 kb on + strandat 419.678 kb on + strandat 419.679 kb on + strandat 419.679 kb on + strandat 419.687 kb on - strandat 419.721 kb on + strandat 419.742 kb on - strandat 419.814 kb on + strand, within B158DRAFT_0416at 419.888 kb on + strand, within B158DRAFT_0416at 420.017 kb on - strand, within B158DRAFT_0416at 420.031 kb on + strand, within B158DRAFT_0416at 420.039 kb on - strand, within B158DRAFT_0416at 420.073 kb on - strand, within B158DRAFT_0416at 420.132 kb on - strand, within B158DRAFT_0416at 420.153 kb on - strand, within B158DRAFT_0416at 420.182 kb on + strand, within B158DRAFT_0416at 420.190 kb on - strand, within B158DRAFT_0416at 420.212 kb on - strand, within B158DRAFT_0416at 420.212 kb on - strand, within B158DRAFT_0416at 420.236 kb on + strand, within B158DRAFT_0416at 420.237 kb on + strand, within B158DRAFT_0416at 420.314 kb on + strandat 421.840 kb on - strandat 421.840 kb on - strandat 421.865 kb on - strandat 421.865 kb on - strandat 421.962 kb on - strand, within B158DRAFT_0418at 421.966 kb on + strand, within B158DRAFT_0418at 421.996 kb on + strand, within B158DRAFT_0418at 422.008 kb on - strand, within B158DRAFT_0418at 422.069 kb on + strand, within B158DRAFT_0418at 422.074 kb on + strand, within B158DRAFT_0418at 422.074 kb on + strand, within B158DRAFT_0418at 422.090 kb on - strand, within B158DRAFT_0418at 422.105 kb on - strand, within B158DRAFT_0418at 422.116 kb on + strand, within B158DRAFT_0418at 422.163 kb on - strand, within B158DRAFT_0418at 422.164 kb on - strand, within B158DRAFT_0418at 422.171 kb on - strand, within B158DRAFT_0418at 422.174 kb on - strand, within B158DRAFT_0418at 422.219 kb on - strand, within B158DRAFT_0418at 422.254 kb on - strand, within B158DRAFT_0418at 422.313 kb on + strand, within B158DRAFT_0418at 422.313 kb on + strand, within B158DRAFT_0418at 422.321 kb on - strand, within B158DRAFT_0418at 422.321 kb on - strand, within B158DRAFT_0418at 422.331 kb on - strand, within B158DRAFT_0418at 422.348 kb on + strand, within B158DRAFT_0418at 422.348 kb on + strand, within B158DRAFT_0418at 422.356 kb on - strand, within B158DRAFT_0418at 422.359 kb on + strand, within B158DRAFT_0418at 422.359 kb on + strand, within B158DRAFT_0418at 422.359 kb on + strand, within B158DRAFT_0418at 422.367 kb on - strand, within B158DRAFT_0418at 422.367 kb on - strand, within B158DRAFT_0418at 422.367 kb on - strand, within B158DRAFT_0418at 422.367 kb on - strand, within B158DRAFT_0418at 422.367 kb on - strand, within B158DRAFT_0418at 422.367 kb on - strand, within B158DRAFT_0418at 422.369 kb on + strand, within B158DRAFT_0418at 422.377 kb on - strand, within B158DRAFT_0418at 422.435 kb on + strand, within B158DRAFT_0418at 422.444 kb on - strand, within B158DRAFT_0418at 422.444 kb on - strand, within B158DRAFT_0418at 422.451 kb on - strand, within B158DRAFT_0418at 422.510 kb on + strand, within B158DRAFT_0418at 422.510 kb on + strand, within B158DRAFT_0418at 422.510 kb on + strand, within B158DRAFT_0418at 422.510 kb on + strand, within B158DRAFT_0418at 422.510 kb on + strand, within B158DRAFT_0418at 422.510 kb on + strand, within B158DRAFT_0418at 422.510 kb on + strand, within B158DRAFT_0418at 422.510 kb on + strand, within B158DRAFT_0418at 422.518 kb on - strand, within B158DRAFT_0418at 422.518 kb on - strand, within B158DRAFT_0418at 422.518 kb on - strand, within B158DRAFT_0418at 422.518 kb on - strand, within B158DRAFT_0418at 422.619 kb on + strandat 422.619 kb on + strandat 422.627 kb on - strandat 422.627 kb on - strandat 422.637 kb on - strandat 422.671 kb on + strandat 422.720 kb on + strandat 422.725 kb on + strandat 422.725 kb on + strandat 422.725 kb on + strandat 422.733 kb on - strandat 422.733 kb on - strandat 422.758 kb on + strandat 422.783 kb on + strand, within B158DRAFT_0419at 422.783 kb on + strand, within B158DRAFT_0419at 422.791 kb on - strand, within B158DRAFT_0419at 422.791 kb on - strand, within B158DRAFT_0419at 422.855 kb on + strand, within B158DRAFT_0419at 422.855 kb on + strand, within B158DRAFT_0419at 422.855 kb on + strand, within B158DRAFT_0419at 422.855 kb on + strand, within B158DRAFT_0419at 422.863 kb on - strand, within B158DRAFT_0419at 422.863 kb on - strand, within B158DRAFT_0419at 422.863 kb on - strand, within B158DRAFT_0419at 422.863 kb on - strand, within B158DRAFT_0419at 422.863 kb on - strand, within B158DRAFT_0419at 422.863 kb on - strand, within B158DRAFT_0419at 422.863 kb on - strand, within B158DRAFT_0419

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Per-strain Table

Position Strand Gene LocusTag Fraction Kang_ML4_MIT diversity barseq
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419,575 + -0.2
419,577 + -0.0
419,610 + -0.6
419,616 + -0.2
419,678 + -1.0
419,679 + +0.4
419,679 + -0.4
419,687 - +0.7
419,721 + -0.8
419,742 - +0.6
419,814 + B158DRAFT_0416 0.19 +0.3
419,888 + B158DRAFT_0416 0.31 -0.1
420,017 - B158DRAFT_0416 0.53 -0.8
420,031 + B158DRAFT_0416 0.55 +0.8
420,039 - B158DRAFT_0416 0.56 -0.3
420,073 - B158DRAFT_0416 0.62 -0.2
420,132 - B158DRAFT_0416 0.72 -1.5
420,153 - B158DRAFT_0416 0.75 -0.3
420,182 + B158DRAFT_0416 0.80 +1.1
420,190 - B158DRAFT_0416 0.81 -0.1
420,212 - B158DRAFT_0416 0.85 +0.5
420,212 - B158DRAFT_0416 0.85 -0.0
420,236 + B158DRAFT_0416 0.89 -0.6
420,237 + B158DRAFT_0416 0.89 -0.2
420,314 + +0.1
421,840 - -0.0
421,840 - +0.7
421,865 - +1.0
421,865 - +1.0
421,962 - B158DRAFT_0418 0.11 +1.6
421,966 + B158DRAFT_0418 0.12 +1.5
421,996 + B158DRAFT_0418 0.16 +3.0
422,008 - B158DRAFT_0418 0.18 +3.0
422,069 + B158DRAFT_0418 0.26 +1.8
422,074 + B158DRAFT_0418 0.26 +2.3
422,074 + B158DRAFT_0418 0.26 +2.2
422,090 - B158DRAFT_0418 0.29 +1.2
422,105 - B158DRAFT_0418 0.31 -0.3
422,116 + B158DRAFT_0418 0.32 +1.2
422,163 - B158DRAFT_0418 0.38 +2.6
422,164 - B158DRAFT_0418 0.38 +2.2
422,171 - B158DRAFT_0418 0.39 -0.0
422,174 - B158DRAFT_0418 0.40 +0.4
422,219 - B158DRAFT_0418 0.46 +1.9
422,254 - B158DRAFT_0418 0.50 +3.0
422,313 + B158DRAFT_0418 0.58 +2.0
422,313 + B158DRAFT_0418 0.58 +1.4
422,321 - B158DRAFT_0418 0.59 -0.0
422,321 - B158DRAFT_0418 0.59 +1.0
422,331 - B158DRAFT_0418 0.61 +1.2
422,348 + B158DRAFT_0418 0.63 +2.9
422,348 + B158DRAFT_0418 0.63 +1.2
422,356 - B158DRAFT_0418 0.64 +2.0
422,359 + B158DRAFT_0418 0.64 +1.7
422,359 + B158DRAFT_0418 0.64 +2.7
422,359 + B158DRAFT_0418 0.64 +1.0
422,367 - B158DRAFT_0418 0.65 +1.8
422,367 - B158DRAFT_0418 0.65 +2.0
422,367 - B158DRAFT_0418 0.65 +1.6
422,367 - B158DRAFT_0418 0.65 +2.6
422,367 - B158DRAFT_0418 0.65 -0.6
422,367 - B158DRAFT_0418 0.65 +1.4
422,369 + B158DRAFT_0418 0.66 +0.8
422,377 - B158DRAFT_0418 0.67 +0.6
422,435 + B158DRAFT_0418 0.75 +2.0
422,444 - B158DRAFT_0418 0.76 +3.0
422,444 - B158DRAFT_0418 0.76 +0.6
422,451 - B158DRAFT_0418 0.77 +1.6
422,510 + B158DRAFT_0418 0.85 +3.3
422,510 + B158DRAFT_0418 0.85 +0.3
422,510 + B158DRAFT_0418 0.85 +1.6
422,510 + B158DRAFT_0418 0.85 +2.0
422,510 + B158DRAFT_0418 0.85 +1.0
422,510 + B158DRAFT_0418 0.85 +1.0
422,510 + B158DRAFT_0418 0.85 +2.0
422,510 + B158DRAFT_0418 0.85 +2.0
422,518 - B158DRAFT_0418 0.86 -1.0
422,518 - B158DRAFT_0418 0.86 +1.0
422,518 - B158DRAFT_0418 0.86 +1.3
422,518 - B158DRAFT_0418 0.86 +2.3
422,619 + +0.2
422,619 + -0.3
422,627 - +0.1
422,627 - +0.1
422,637 - -0.4
422,671 + -1.1
422,720 + +0.0
422,725 + +0.1
422,725 + -0.9
422,725 + -0.9
422,733 - -0.0
422,733 - -0.1
422,758 + -0.6
422,783 + B158DRAFT_0419 0.11 -0.1
422,783 + B158DRAFT_0419 0.11 +0.4
422,791 - B158DRAFT_0419 0.12 -0.2
422,791 - B158DRAFT_0419 0.12 -0.0
422,855 + B158DRAFT_0419 0.17 -0.6
422,855 + B158DRAFT_0419 0.17 -0.0
422,855 + B158DRAFT_0419 0.17 -1.0
422,855 + B158DRAFT_0419 0.17 +0.3
422,863 - B158DRAFT_0419 0.18 +0.3
422,863 - B158DRAFT_0419 0.18 +0.1
422,863 - B158DRAFT_0419 0.18 -0.7
422,863 - B158DRAFT_0419 0.18 -0.1
422,863 - B158DRAFT_0419 0.18 -0.1
422,863 - B158DRAFT_0419 0.18 +0.1
422,863 - B158DRAFT_0419 0.18 -0.2

Or see this region's nucleotide sequence