Strain Fitness in Escherichia coli BW25113 around b4187

Experiment: dodecane 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	dodecane 5 vol%
4,411,298	+	yjfC	b4186	0.21	+1.2
4,411,298	+	yjfC	b4186	0.21	+0.5
4,411,357	+	yjfC	b4186	0.26	-0.7
4,411,376	-	yjfC	b4186	0.28	-0.0
4,411,398	+	yjfC	b4186	0.30	+0.4
4,411,398	+	yjfC	b4186	0.30	-1.3
4,411,579	+	yjfC	b4186	0.45	+0.3
4,411,585	-	yjfC	b4186	0.46	+0.3
4,411,642	+	yjfC	b4186	0.51	-0.3
4,411,643	-	yjfC	b4186	0.51	-0.1
4,411,704	-	yjfC	b4186	0.56	+0.3
4,411,704	-	yjfC	b4186	0.56	+0.3
4,411,730	-	yjfC	b4186	0.58	+0.2
4,411,740	+	yjfC	b4186	0.59	+0.4
4,411,805	+	yjfC	b4186	0.65	-0.4
4,411,863	-	yjfC	b4186	0.70	+0.7
4,411,863	-	yjfC	b4186	0.70	+0.5
4,411,872	+	yjfC	b4186	0.71	+1.2
4,411,900	-	yjfC	b4186	0.73	-0.1
4,411,900	-	yjfC	b4186	0.73	+0.9
4,411,904	+	yjfC	b4186	0.73	+0.8
4,411,904	+	yjfC	b4186	0.73	+0.6
4,411,958	-	yjfC	b4186	0.78	-0.3
4,412,034	-	yjfC	b4186	0.84	-0.6
4,412,064	+	yjfC	b4186	0.87	-0.3
4,412,064	+	yjfC	b4186	0.87	+0.5
4,412,101	-				+0.2
4,412,101	-				-0.1
4,412,146	-				+0.3
4,412,246	-				-0.1
4,412,252	+				+0.6
4,412,270	-				+1.6
4,412,282	-				+1.2
4,412,286	+				+0.3
4,412,319	+				+0.1
4,412,338	-				-0.3
4,412,338	-				-0.4
4,412,360	-				-0.3
4,412,378	+				-0.9
4,412,449	-				+0.8
4,412,449	-				-0.3
4,412,564	-	aidB	b4187	0.16	-0.0
4,412,611	+	aidB	b4187	0.19	+1.3
4,412,611	+	aidB	b4187	0.19	-0.2
4,412,670	+	aidB	b4187	0.23	+0.9
4,412,670	+	aidB	b4187	0.23	+0.0
4,412,712	-	aidB	b4187	0.25	-0.8
4,412,793	-	aidB	b4187	0.30	+0.0
4,412,901	-	aidB	b4187	0.37	-0.5
4,412,908	-	aidB	b4187	0.38	-0.4
4,413,002	+	aidB	b4187	0.43	+0.1
4,413,002	+	aidB	b4187	0.43	-0.7
4,413,088	+	aidB	b4187	0.49	+0.5
4,413,088	-	aidB	b4187	0.49	-0.7
4,413,123	+	aidB	b4187	0.51	+0.3
4,413,240	-	aidB	b4187	0.58	-1.0
4,413,240	-	aidB	b4187	0.58	-0.7
4,413,318	-	aidB	b4187	0.63	-0.0
4,413,489	+	aidB	b4187	0.73	-0.5
4,413,521	+	aidB	b4187	0.75	-0.9
4,413,586	+	aidB	b4187	0.79	-0.7
4,413,690	-	aidB	b4187	0.86	+0.5
4,413,735	+	aidB	b4187	0.88	+0.3
4,413,735	+	aidB	b4187	0.88	-0.5
4,413,865	+				+0.7
4,413,918	+				-0.0
4,413,918	-				+0.1
4,414,039	+				-1.8
4,414,039	+				+0.8
4,414,049	-				+0.4
4,414,049	-				+0.4
4,414,051	+				+1.4
4,414,136	+	yjfN	b4188	0.35	-0.1
4,414,136	+	yjfN	b4188	0.35	-0.3
4,414,142	-	yjfN	b4188	0.37	+0.7
4,414,142	-	yjfN	b4188	0.37	-0.6
4,414,160	+	yjfN	b4188	0.43	-1.8
4,414,181	-	yjfN	b4188	0.51	-0.3
4,414,206	-	yjfN	b4188	0.60	-1.5
4,414,226	-	yjfN	b4188	0.67	+0.5
4,414,226	-	yjfN	b4188	0.67	+0.1
4,414,230	+	yjfN	b4188	0.69	+0.0
4,414,252	+	yjfN	b4188	0.77	+0.7
4,414,254	+	yjfN	b4188	0.78	+0.1
4,414,257	-	yjfN	b4188	0.79	-1.3
4,414,257	-	yjfN	b4188	0.79	+0.1
4,414,345	+				+0.3
4,414,355	+				-0.4
4,414,356	+				+0.7
4,414,368	+				+0.3
4,414,368	+				+0.1
4,414,374	-				+0.3
4,414,374	-				+0.1
4,414,377	-				-0.4
4,414,377	-				+0.3
4,414,392	+				-0.0
4,414,394	+				-0.0
4,414,394	+				-0.1
4,414,409	+				+0.6
4,414,409	+				-0.1
4,414,409	+				+0.6
4,414,410	-				+0.5
4,414,415	-				+0.2
4,414,422	-				+0.7
4,414,424	+				+0.3
4,414,424	+				+0.4
4,414,431	+				+0.7
4,414,431	+				-1.6
4,414,434	+				+0.6
4,414,434	+				+0.7
4,414,442	-				-0.4
4,414,448	+				-0.1
4,414,448	+				+0.0
4,414,456	-				-0.5
4,414,499	+	yjfO	b4189	0.11	-0.6
4,414,523	-	yjfO	b4189	0.18	+0.2
4,414,599	+	yjfO	b4189	0.41	+0.5
4,414,599	+	yjfO	b4189	0.41	-0.7
4,414,613	+	yjfO	b4189	0.45	+0.3
4,414,617	-	yjfO	b4189	0.46	-0.7
4,414,621	-	yjfO	b4189	0.48	+0.1
4,414,621	-	yjfO	b4189	0.48	+0.2
4,414,621	-	yjfO	b4189	0.48	+0.8
4,414,651	-	yjfO	b4189	0.57	+0.6
4,414,682	-	yjfO	b4189	0.66	+0.6
4,414,682	-	yjfO	b4189	0.66	+0.7
4,414,704	+	yjfO	b4189	0.73	+0.6
4,414,705	-	yjfO	b4189	0.73	+0.6
4,414,716	+	yjfO	b4189	0.76	+0.3
4,414,722	-	yjfO	b4189	0.78	-0.1
4,414,746	-	yjfO	b4189	0.85	-0.2
4,414,791	-				+0.2
4,414,791	-				+0.3
4,414,795	+				+0.5
4,414,800	-				+1.9
4,414,800	-				+1.4
4,414,825	-				+0.5
4,414,838	-				-0.3
4,414,838	-				+0.1
4,414,885	+				+0.4
4,414,899	+				+0.1
4,414,899	+				+1.2