Strain Fitness in Escherichia coli BW25113 around b3915

Experiment: dodecane 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	dodecane 5 vol%
4,103,496	-	cpxR	b3912	0.72	+0.2
4,103,496	-	cpxR	b3912	0.72	+0.4
4,103,496	-	cpxR	b3912	0.72	+0.0
4,103,585	+	cpxR	b3912	0.84	+0.9
4,103,585	+	cpxR	b3912	0.84	+1.1
4,103,598	+	cpxR	b3912	0.86	+0.6
4,103,620	-	cpxR	b3912	0.89	-0.2
4,103,639	+				+0.3
4,103,676	-				+0.3
4,103,676	-				+0.9
4,103,695	-				+0.5
4,103,757	+				+0.5
4,103,858	-				-1.0
4,103,860	-				-0.5
4,103,864	+				+0.4
4,103,879	-				+1.5
4,103,879	-				+0.2
4,103,906	+	cpxP	b4484	0.13	+0.1
4,103,953	+	cpxP	b4484	0.22	-0.1
4,103,958	+	cpxP	b4484	0.23	-0.3
4,103,958	+	cpxP	b4484	0.23	-0.7
4,103,959	-	cpxP	b4484	0.23	-0.4
4,103,964	-	cpxP	b4484	0.24	-0.3
4,103,971	-	cpxP	b4484	0.26	-0.9
4,103,989	+	cpxP	b4484	0.29	+0.7
4,103,989	+	cpxP	b4484	0.29	+0.6
4,103,997	-	cpxP	b4484	0.31	+0.4
4,104,009	-	cpxP	b4484	0.33	+0.2
4,104,241	-	cpxP	b4484	0.79	-0.2
4,104,263	+	cpxP	b4484	0.84	+0.4
4,104,276	-	cpxP	b4484	0.86	-1.1
4,104,313	+				-0.3
4,104,343	-				-0.8
4,104,348	-				-0.6
4,104,348	-				-1.3
4,104,358	-				+0.6
4,104,358	-				+0.5
4,104,364	+				+0.1
4,104,364	+				+0.3
4,104,387	-				+0.1
4,104,421	-				-0.8
4,104,429	+				+0.0
4,104,429	+				+0.6
4,104,437	-				-0.9
4,104,442	-				-0.5
4,104,508	-				-0.2
4,104,510	+				-0.2
4,104,510	+				+0.8
4,104,515	+				-0.9
4,104,520	+				-0.7
4,104,520	+				-0.0
4,104,543	-				-0.1
4,104,584	+	fieF	b3915	0.10	-0.2
4,104,584	+	fieF	b3915	0.10	-0.1
4,104,592	-	fieF	b3915	0.11	+0.9
4,104,592	-	fieF	b3915	0.11	+0.1
4,104,592	-	fieF	b3915	0.11	-0.1
4,104,592	-	fieF	b3915	0.11	-0.1
4,104,615	+	fieF	b3915	0.14	+0.2
4,104,615	+	fieF	b3915	0.14	-1.0
4,104,625	+	fieF	b3915	0.15	+0.2
4,104,682	-	fieF	b3915	0.21	-0.1
4,104,698	-	fieF	b3915	0.23	+0.8
4,104,698	-	fieF	b3915	0.23	-1.1
4,104,724	-	fieF	b3915	0.26	-0.1
4,104,726	-	fieF	b3915	0.26	-0.1
4,104,726	-	fieF	b3915	0.26	-0.4
4,104,751	+	fieF	b3915	0.29	+0.1
4,104,766	+	fieF	b3915	0.30	-0.2
4,104,771	+	fieF	b3915	0.31	+0.1
4,104,785	+	fieF	b3915	0.32	+0.6
4,104,841	+	fieF	b3915	0.39	-1.1
4,104,849	-	fieF	b3915	0.40	+1.5
4,104,849	-	fieF	b3915	0.40	+0.8
4,104,896	+	fieF	b3915	0.45	+0.1
4,104,896	+	fieF	b3915	0.45	+0.6
4,104,920	+	fieF	b3915	0.47	-0.1
4,104,945	+	fieF	b3915	0.50	+0.7
4,104,950	-	fieF	b3915	0.51	-0.6
4,104,956	+	fieF	b3915	0.51	+0.4
4,104,956	+	fieF	b3915	0.51	+0.7
4,105,001	+	fieF	b3915	0.56	+0.4
4,105,001	+	fieF	b3915	0.56	+0.4
4,105,001	+	fieF	b3915	0.56	-0.2
4,105,004	-	fieF	b3915	0.57	+0.2
4,105,005	+	fieF	b3915	0.57	+0.5
4,105,009	-	fieF	b3915	0.57	+0.5
4,105,019	-	fieF	b3915	0.58	+0.8
4,105,019	-	fieF	b3915	0.58	-0.4
4,105,024	+	fieF	b3915	0.59	-0.4
4,105,084	-	fieF	b3915	0.66	-0.3
4,105,112	-	fieF	b3915	0.69	+0.6
4,105,115	+	fieF	b3915	0.69	-0.4
4,105,123	-	fieF	b3915	0.70	-0.1
4,105,123	-	fieF	b3915	0.70	-0.3
4,105,204	+	fieF	b3915	0.79	-0.2
4,105,204	+	fieF	b3915	0.79	+0.8
4,105,204	+	fieF	b3915	0.79	+1.8
4,105,204	+	fieF	b3915	0.79	-0.2
4,105,279	-	fieF	b3915	0.87	+0.4
4,105,288	+	fieF	b3915	0.88	+0.0
4,105,297	+	fieF	b3915	0.89	-0.5
4,105,301	-	fieF	b3915	0.90	+0.9
4,105,346	+				+0.8
4,105,346	+				+0.6
4,105,356	+				+0.2
4,105,361	+				+0.7
4,105,388	+				-0.4
4,105,398	+				+0.7
4,105,398	+				+0.0
4,105,452	+				+0.7
4,105,453	+				+0.2
4,105,517	-				+0.5
4,105,569	+				-0.6
4,105,569	+				+0.3
4,105,569	-				-0.3
4,105,571	+				-0.3
4,105,620	+				-0.7
4,105,620	+				-1.2
4,105,718	-	pfkA	b3916	0.15	+1.4
4,105,718	-	pfkA	b3916	0.15	-1.0
4,105,728	+	pfkA	b3916	0.16	-0.4
4,105,728	-	pfkA	b3916	0.16	-0.6
4,105,746	-	pfkA	b3916	0.18	+0.3
4,105,752	+	pfkA	b3916	0.18	-0.6
4,105,768	-	pfkA	b3916	0.20	-0.0
4,105,890	+	pfkA	b3916	0.33	-0.9
4,106,003	+	pfkA	b3916	0.44	-0.6
4,106,004	-	pfkA	b3916	0.45	+0.2
4,106,014	+	pfkA	b3916	0.46	-0.4
4,106,014	+	pfkA	b3916	0.46	+0.2
4,106,022	-	pfkA	b3916	0.46	-0.8
4,106,044	+	pfkA	b3916	0.49	-0.9
4,106,070	-	pfkA	b3916	0.51	-0.4
4,106,325	+	pfkA	b3916	0.78	-0.0