Strain Fitness in Escherichia coli BW25113 around b1768
Experiment: dodecane 5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | dodecane 5 vol% |
---|---|---|---|---|---|
remove | |||||
1,848,979 | - | +0.6 | |||
1,848,979 | - | -0.4 | |||
1,849,035 | - | ansA | b1767 | 0.15 | -1.0 |
1,849,123 | + | ansA | b1767 | 0.24 | -0.1 |
1,849,152 | + | ansA | b1767 | 0.26 | -1.5 |
1,849,152 | + | ansA | b1767 | 0.26 | -0.5 |
1,849,160 | - | ansA | b1767 | 0.27 | +0.6 |
1,849,160 | - | ansA | b1767 | 0.27 | +0.3 |
1,849,173 | - | ansA | b1767 | 0.28 | +0.6 |
1,849,184 | - | ansA | b1767 | 0.29 | +0.4 |
1,849,260 | - | ansA | b1767 | 0.37 | -0.1 |
1,849,474 | - | ansA | b1767 | 0.58 | -0.1 |
1,849,474 | - | ansA | b1767 | 0.58 | -0.8 |
1,849,603 | + | ansA | b1767 | 0.71 | +0.1 |
1,849,751 | + | ansA | b1767 | 0.85 | +0.4 |
1,849,785 | + | ansA | b1767 | 0.89 | -0.6 |
1,849,896 | + | +0.2 | |||
1,849,896 | + | -0.1 | |||
1,850,057 | - | ydjB | b1768 | 0.23 | +1.0 |
1,850,262 | + | ydjB | b1768 | 0.55 | -0.4 |
1,850,272 | - | ydjB | b1768 | 0.56 | +0.4 |
1,850,313 | + | ydjB | b1768 | 0.63 | -0.4 |
1,850,352 | + | ydjB | b1768 | 0.69 | -0.2 |
1,850,353 | + | ydjB | b1768 | 0.69 | +0.0 |
1,850,365 | + | ydjB | b1768 | 0.71 | +0.2 |
1,850,365 | + | ydjB | b1768 | 0.71 | -0.6 |
1,850,367 | + | ydjB | b1768 | 0.71 | +0.1 |
1,850,372 | + | ydjB | b1768 | 0.72 | -0.0 |
1,850,372 | + | ydjB | b1768 | 0.72 | +0.1 |
1,850,463 | + | ydjB | b1768 | 0.86 | -0.1 |
1,850,463 | + | ydjB | b1768 | 0.86 | -0.1 |
1,850,463 | + | ydjB | b1768 | 0.86 | -0.0 |
1,850,484 | + | ydjB | b1768 | 0.89 | +0.2 |
1,850,523 | + | +0.2 | |||
1,850,552 | + | -0.3 | |||
1,850,552 | + | +0.2 | |||
1,850,567 | + | +0.3 | |||
1,850,567 | + | +0.4 | |||
1,850,570 | + | +0.4 | |||
1,850,570 | + | -0.0 | |||
1,850,669 | + | +1.0 | |||
1,850,718 | - | -0.4 | |||
1,850,718 | - | +0.7 | |||
1,850,720 | + | -0.2 | |||
1,850,728 | + | +0.6 | |||
1,850,728 | + | -0.1 | |||
1,850,728 | - | -0.4 | |||
1,850,738 | + | -0.4 | |||
1,850,752 | - | -0.1 | |||
1,850,795 | - | ydjE | b1769 | 0.11 | -0.0 |
1,850,795 | - | ydjE | b1769 | 0.11 | -0.3 |
1,850,795 | - | ydjE | b1769 | 0.11 | -0.3 |
1,850,796 | + | ydjE | b1769 | 0.11 | -0.1 |
1,850,796 | + | ydjE | b1769 | 0.11 | +0.6 |
1,850,803 | + | ydjE | b1769 | 0.12 | -0.3 |
1,850,804 | - | ydjE | b1769 | 0.12 | -0.4 |
1,850,812 | - | ydjE | b1769 | 0.12 | -0.1 |
1,850,816 | - | ydjE | b1769 | 0.13 | -0.7 |
1,850,836 | + | ydjE | b1769 | 0.14 | +0.4 |
1,850,851 | + | ydjE | b1769 | 0.15 | -0.5 |
1,850,852 | + | ydjE | b1769 | 0.15 | +0.1 |
1,850,853 | + | ydjE | b1769 | 0.15 | -0.0 |
1,850,854 | + | ydjE | b1769 | 0.15 | -0.2 |
1,850,907 | + | ydjE | b1769 | 0.19 | +0.7 |
1,850,907 | + | ydjE | b1769 | 0.19 | +0.3 |
1,850,942 | + | ydjE | b1769 | 0.22 | -0.4 |
1,850,957 | + | ydjE | b1769 | 0.23 | -0.7 |
1,850,978 | + | ydjE | b1769 | 0.25 | -0.6 |
1,851,163 | - | ydjE | b1769 | 0.38 | -0.7 |
1,851,176 | - | ydjE | b1769 | 0.39 | +0.4 |
1,851,276 | - | ydjE | b1769 | 0.46 | +0.4 |
1,851,280 | - | ydjE | b1769 | 0.47 | +0.6 |
1,851,297 | - | ydjE | b1769 | 0.48 | +0.4 |
1,851,312 | - | ydjE | b1769 | 0.49 | +0.0 |
1,851,312 | - | ydjE | b1769 | 0.49 | -0.3 |
1,851,348 | - | ydjE | b1769 | 0.52 | +0.2 |
1,851,348 | - | ydjE | b1769 | 0.52 | -0.6 |
1,851,364 | - | ydjE | b1769 | 0.53 | -0.5 |
1,851,435 | - | ydjE | b1769 | 0.58 | -0.0 |
1,851,457 | - | ydjE | b1769 | 0.60 | +0.5 |
1,851,521 | - | ydjE | b1769 | 0.64 | +0.2 |
1,851,521 | - | ydjE | b1769 | 0.64 | +1.1 |
1,851,526 | - | ydjE | b1769 | 0.65 | -0.1 |
Or see this region's nucleotide sequence