Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_08135

Experiment: marine_broth_2216 with Chloride 500 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine_broth_2216 with Chloride 500 mM
1,874,563	-		CA264_08125	0.46	-1.1
1,874,566	+		CA264_08125	0.47	-0.2
1,874,575	-		CA264_08125	0.50	-0.3
1,874,577	+		CA264_08125	0.50	-1.4
1,874,577	+		CA264_08125	0.50	-0.6
1,874,577	+		CA264_08125	0.50	+0.5
1,874,593	+		CA264_08125	0.55	+0.4
1,874,594	-		CA264_08125	0.56	-0.7
1,874,693	-		CA264_08125	0.85	-1.3
1,874,814	+				-0.7
1,874,842	+				-0.6
1,874,843	-				+1.3
1,874,845	+				+0.1
1,874,898	+				-1.0
1,875,016	-				-0.2
1,875,016	-				-0.5
1,875,016	-				-0.1
1,875,016	-				+0.3
1,875,017	+				-0.4
1,875,017	+				-0.1
1,875,017	+				+0.3
1,875,017	+				+0.5
1,875,018	-				+0.5
1,875,039	+				+0.0
1,875,039	+				+0.3
1,875,049	+				-1.8
1,875,057	+				-0.8
1,875,065	+				+0.7
1,875,067	+				-0.2
1,875,068	-				+0.1
1,875,163	+		CA264_08130	0.36	-0.7
1,875,285	-		CA264_08130	0.77	-0.4
1,875,338	+				+0.8
1,875,338	+				+0.1
1,875,344	+				+0.1
1,875,347	-				+1.3
1,875,417	+				+0.0
1,875,418	-				-1.1
1,875,429	-				+0.4
1,875,429	-				-0.4
1,875,470	+				-0.7
1,875,618	+				+0.8
1,875,618	+				+0.3
1,875,619	-				+0.2
1,875,619	-				+1.2
1,875,619	-				+0.8
1,875,624	+				+0.2
1,875,914	-		CA264_08135	0.10	+0.1
1,875,926	+		CA264_08135	0.11	-0.9
1,875,927	-		CA264_08135	0.11	+0.8
1,876,018	+		CA264_08135	0.13	-0.5
1,876,039	+		CA264_08135	0.14	-0.1
1,876,040	-		CA264_08135	0.14	-1.3
1,876,050	+		CA264_08135	0.14	-0.1
1,876,069	+		CA264_08135	0.15	-0.7
1,876,069	+		CA264_08135	0.15	-0.5
1,876,070	-		CA264_08135	0.15	+1.4
1,876,106	-		CA264_08135	0.16	-0.4
1,876,339	+		CA264_08135	0.23	-0.3
1,876,417	+		CA264_08135	0.25	-0.4
1,876,418	-		CA264_08135	0.25	-0.2
1,876,418	-		CA264_08135	0.25	-1.1
1,876,428	-		CA264_08135	0.25	-0.5
1,876,428	-		CA264_08135	0.25	-0.7
1,876,450	-		CA264_08135	0.26	+0.1
1,876,514	-		CA264_08135	0.28	+0.7
1,876,555	+		CA264_08135	0.29	+0.2
1,876,556	-		CA264_08135	0.29	+1.2
1,876,558	+		CA264_08135	0.29	-0.5
1,876,558	+		CA264_08135	0.29	+0.6
1,876,558	+		CA264_08135	0.29	-0.8
1,876,559	-		CA264_08135	0.29	-0.7
1,876,559	-		CA264_08135	0.29	-0.2
1,876,559	-		CA264_08135	0.29	+0.2
1,876,559	-		CA264_08135	0.29	-1.2
1,876,559	-		CA264_08135	0.29	+0.1
1,876,559	-		CA264_08135	0.29	-0.4
1,876,561	+		CA264_08135	0.29	-0.2
1,876,562	-		CA264_08135	0.29	+1.2
1,876,562	-		CA264_08135	0.29	+1.0
1,876,679	+		CA264_08135	0.32	+0.6
1,876,680	-		CA264_08135	0.32	-0.2
1,876,731	+		CA264_08135	0.34	-0.5
1,876,733	+		CA264_08135	0.34	-1.1
1,876,734	-		CA264_08135	0.34	-0.7
1,876,734	-		CA264_08135	0.34	+0.3
1,876,734	-		CA264_08135	0.34	-0.2
1,876,799	+		CA264_08135	0.36	-0.5
1,876,879	-		CA264_08135	0.38	-0.0
1,876,879	-		CA264_08135	0.38	+0.0
1,876,879	-		CA264_08135	0.38	+1.0
1,876,880	+		CA264_08135	0.38	-0.3
1,876,881	-		CA264_08135	0.38	-1.1
1,876,881	-		CA264_08135	0.38	+0.3
1,876,881	-		CA264_08135	0.38	-0.3
1,876,924	+		CA264_08135	0.40	-0.3
1,876,925	-		CA264_08135	0.40	+0.1
1,876,936	+		CA264_08135	0.40	-3.1
1,876,937	-		CA264_08135	0.40	-0.2
1,876,973	-		CA264_08135	0.41	+2.2
1,876,973	-		CA264_08135	0.41	+0.3
1,877,003	+		CA264_08135	0.42	+0.8
1,877,181	+		CA264_08135	0.47	-0.0
1,877,181	+		CA264_08135	0.47	+0.3
1,877,182	-		CA264_08135	0.47	+1.6
1,877,182	-		CA264_08135	0.47	-0.2
1,877,182	-		CA264_08135	0.47	+0.1
1,877,182	-		CA264_08135	0.47	+0.1
1,877,186	+		CA264_08135	0.47	+0.8
1,877,187	-		CA264_08135	0.47	-0.6
1,877,262	-		CA264_08135	0.49	-0.2
1,877,283	-		CA264_08135	0.50	-0.5
1,877,283	-		CA264_08135	0.50	+1.8
1,877,285	+		CA264_08135	0.50	+0.5
1,877,312	-		CA264_08135	0.51	+3.2
1,877,333	+		CA264_08135	0.51	+0.2
1,877,482	+		CA264_08135	0.56	-0.5
1,877,483	-		CA264_08135	0.56	+1.6
1,877,505	-		CA264_08135	0.56	+0.4
1,877,842	-		CA264_08135	0.66	+0.9
1,877,842	-		CA264_08135	0.66	+0.8
1,877,842	-		CA264_08135	0.66	+0.1
1,877,857	+		CA264_08135	0.67	-0.2
1,877,857	+		CA264_08135	0.67	+1.8
1,877,858	-		CA264_08135	0.67	-0.5
1,877,858	-		CA264_08135	0.67	-2.3
1,877,933	+		CA264_08135	0.69	+1.2
1,878,111	+		CA264_08135	0.74	+0.0
1,878,143	-		CA264_08135	0.75	+0.0
1,878,146	+		CA264_08135	0.75	-0.0
1,878,146	+		CA264_08135	0.75	+0.8
1,878,147	-		CA264_08135	0.75	-2.3
1,878,197	-		CA264_08135	0.77	-0.5
1,878,209	+		CA264_08135	0.77	+0.2
1,878,226	+		CA264_08135	0.77	+0.2
1,878,226	+		CA264_08135	0.77	-0.9
1,878,374	+		CA264_08135	0.82	-0.1
1,878,394	+		CA264_08135	0.82	+0.8
1,878,395	-		CA264_08135	0.82	+1.8
1,878,395	-		CA264_08135	0.82	-0.3
1,878,533	+		CA264_08135	0.86	-0.1
1,878,534	-		CA264_08135	0.86	+0.1
1,878,649	-		CA264_08135	0.90	+0.1
1,878,649	-		CA264_08135	0.90	-1.5
1,878,691	-				+0.0
1,878,797	+				+0.7
1,878,797	+				+0.2
1,878,856	+				-0.7
1,878,901	+				+0.8
1,878,902	-				-0.2
1,878,902	-				-0.2
1,878,905	+				-0.0
1,878,907	+				+0.1
1,878,907	+				+0.2
1,878,988	-				+0.7
1,879,004	+				+0.8
1,879,005	-				-0.8
1,879,021	+				+1.3
1,879,021	+				-0.9
1,879,037	+				+1.2
1,879,038	-				+1.6
1,879,038	-				-0.6
1,879,081	+				+0.3
1,879,089	-				+0.8
1,879,092	-				-0.4
1,879,094	-				+0.5
1,879,094	-				-0.4
1,879,098	-				-0.8
1,879,135	+				-1.3
1,879,155	+				-0.4
1,879,158	+				-0.6
1,879,159	-				-0.6
1,879,159	-				-0.9
1,879,181	+				+0.2
1,879,183	+				+0.2
1,879,344	+				+0.6
1,879,345	-				-1.4
1,879,345	-				+0.2
1,879,345	-				-0.4
1,879,345	-				-0.5
1,879,345	-				-0.4
1,879,348	+				-1.0
1,879,349	-				-0.3
1,879,349	-				-0.8
1,879,353	+				+1.8
1,879,508	-		CA264_08140	0.26	-0.8
1,879,544	+		CA264_08140	0.31	+0.5
1,879,544	+		CA264_08140	0.31	-1.3
1,879,566	+		CA264_08140	0.34	+0.1
1,879,731	-		CA264_08140	0.57	-0.0
1,879,735	+		CA264_08140	0.57	+0.6