Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_00325

Experiment: Ponti_ML7_MIT diversity barseq

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_00320 and CA264_00325 are separated by 108 nucleotidesCA264_00325 and CA264_00330 are separated by 422 nucleotides CA264_00320: CA264_00320 - hypothetical protein, at 74,641 to 75,291 _00320 CA264_00325: CA264_00325 - hypothetical protein, at 75,400 to 75,771 _00325 CA264_00330: CA264_00330 - hypothetical protein, at 76,194 to 76,925 _00330 Position (kb) 75 76Strain fitness (log2 ratio) -2 -1 0 1 2at 74.405 kb on + strandat 74.461 kb on + strandat 74.462 kb on - strandat 74.462 kb on - strandat 74.505 kb on + strandat 74.723 kb on + strand, within CA264_00320at 74.723 kb on + strand, within CA264_00320at 74.780 kb on - strand, within CA264_00320at 74.862 kb on - strand, within CA264_00320at 74.957 kb on + strand, within CA264_00320at 74.958 kb on - strand, within CA264_00320at 74.961 kb on + strand, within CA264_00320at 74.962 kb on - strand, within CA264_00320at 75.041 kb on + strand, within CA264_00320at 75.086 kb on - strand, within CA264_00320at 75.107 kb on + strand, within CA264_00320at 75.108 kb on - strand, within CA264_00320at 75.108 kb on - strand, within CA264_00320at 75.261 kb on + strandat 75.311 kb on - strandat 75.393 kb on - strandat 75.423 kb on - strandat 75.423 kb on - strandat 75.426 kb on + strandat 75.554 kb on + strand, within CA264_00325at 75.555 kb on - strand, within CA264_00325at 75.608 kb on + strand, within CA264_00325at 75.669 kb on + strand, within CA264_00325at 75.669 kb on + strand, within CA264_00325at 75.689 kb on + strand, within CA264_00325at 75.690 kb on - strand, within CA264_00325at 75.690 kb on - strand, within CA264_00325at 75.738 kb on - strandat 75.871 kb on + strandat 75.872 kb on - strandat 76.024 kb on - strandat 76.167 kb on - strandat 76.207 kb on + strandat 76.208 kb on - strandat 76.208 kb on - strandat 76.211 kb on + strandat 76.211 kb on + strandat 76.211 kb on + strandat 76.326 kb on + strand, within CA264_00330at 76.327 kb on - strand, within CA264_00330at 76.419 kb on + strand, within CA264_00330at 76.424 kb on + strand, within CA264_00330at 76.564 kb on - strand, within CA264_00330at 76.582 kb on - strand, within CA264_00330at 76.708 kb on - strand, within CA264_00330at 76.723 kb on + strand, within CA264_00330

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Per-strain Table

Position Strand Gene LocusTag Fraction Ponti_ML7_MIT diversity barseq
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74,405 + -0.1
74,461 + +0.3
74,462 - -0.9
74,462 - +1.3
74,505 + -1.7
74,723 + CA264_00320 0.13 -1.1
74,723 + CA264_00320 0.13 +0.9
74,780 - CA264_00320 0.21 -0.3
74,862 - CA264_00320 0.34 +1.1
74,957 + CA264_00320 0.49 +0.3
74,958 - CA264_00320 0.49 -0.2
74,961 + CA264_00320 0.49 +1.6
74,962 - CA264_00320 0.49 +0.5
75,041 + CA264_00320 0.61 +0.9
75,086 - CA264_00320 0.68 -0.9
75,107 + CA264_00320 0.72 -0.5
75,108 - CA264_00320 0.72 -0.0
75,108 - CA264_00320 0.72 +0.7
75,261 + +1.0
75,311 - -0.1
75,393 - +1.3
75,423 - -1.6
75,423 - -0.1
75,426 + +0.7
75,554 + CA264_00325 0.41 +0.5
75,555 - CA264_00325 0.42 -2.6
75,608 + CA264_00325 0.56 +0.6
75,669 + CA264_00325 0.72 +0.6
75,669 + CA264_00325 0.72 +1.7
75,689 + CA264_00325 0.78 +0.2
75,690 - CA264_00325 0.78 -0.9
75,690 - CA264_00325 0.78 -1.1
75,738 - +0.2
75,871 + -0.3
75,872 - -0.3
76,024 - +0.4
76,167 - +0.9
76,207 + +1.9
76,208 - -1.6
76,208 - +1.2
76,211 + -0.1
76,211 + -1.4
76,211 + -0.4
76,326 + CA264_00330 0.18 +0.6
76,327 - CA264_00330 0.18 -0.1
76,419 + CA264_00330 0.31 -0.8
76,424 + CA264_00330 0.31 -0.9
76,564 - CA264_00330 0.51 +0.5
76,582 - CA264_00330 0.53 +0.3
76,708 - CA264_00330 0.70 -0.1
76,723 + CA264_00330 0.72 +0.9

Or see this region's nucleotide sequence