Strain Fitness in Escherichia coli BL21 around ECD_04169

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
4,436,447	+				-0.3
4,436,448	-				-0.2
4,436,448	-				+0.6
4,436,461	-				+0.6
4,436,468	+				+0.3
4,436,468	+				+0.3
4,436,468	+				+0.3
4,436,469	-				+0.2
4,436,572	+				+0.2
4,436,573	-				+0.5
4,436,573	-				-0.2
4,436,605	-				+0.1
4,436,623	+				+0.1
4,436,623	+				-0.0
4,436,624	-				-0.4
4,436,625	+				+0.1
4,436,625	+				-0.1
4,436,625	+				+0.1
4,436,625	+				+0.1
4,436,625	+				+0.8
4,436,625	+				+0.5
4,436,626	-				+0.3
4,436,626	-				-0.6
4,436,626	-				+0.1
4,436,626	-				+0.5
4,436,626	-				+0.7
4,436,644	-				+0.3
4,436,697	+		ECD_04168	0.10	+0.1
4,436,883	+		ECD_04168	0.33	-0.1
4,436,884	-		ECD_04168	0.33	-0.1
4,436,899	-		ECD_04168	0.35	+0.6
4,436,904	+		ECD_04168	0.36	+0.4
4,436,904	+		ECD_04168	0.36	+0.7
4,436,904	+		ECD_04168	0.36	+1.0
4,437,018	+		ECD_04168	0.50	-0.1
4,437,058	-		ECD_04168	0.55	-0.4
4,437,061	+		ECD_04168	0.55	-0.3
4,437,222	-		ECD_04168	0.75	-0.0
4,437,222	-		ECD_04168	0.75	+0.1
4,437,231	+		ECD_04168	0.76	-0.4
4,437,231	+		ECD_04168	0.76	-0.8
4,437,361	+				-0.1
4,437,362	-				-0.1
4,437,362	-				+0.6
4,437,457	+				+0.2
4,437,457	-				+0.4
4,437,458	-				+0.4
4,437,458	-				-0.2
4,437,458	-				-0.4
4,437,458	-				-0.3
4,437,458	-				+0.1
4,437,549	+				-0.1
4,437,549	+				+0.3
4,437,550	-				-0.4
4,437,630	-		ECD_04169	0.15	+0.1
4,437,630	-		ECD_04169	0.15	+0.3
4,437,685	+		ECD_04169	0.19	-0.2
4,437,686	-		ECD_04169	0.19	+1.8
4,437,729	+		ECD_04169	0.23	+0.3
4,437,729	+		ECD_04169	0.23	-0.3
4,437,730	-		ECD_04169	0.23	+0.1
4,437,735	+		ECD_04169	0.23	+0.3
4,437,806	-		ECD_04169	0.28	+0.1
4,437,810	+		ECD_04169	0.29	+0.4
4,437,811	-		ECD_04169	0.29	+0.2
4,437,811	-		ECD_04169	0.29	-0.2
4,437,811	-		ECD_04169	0.29	+0.4
4,437,823	+		ECD_04169	0.30	+0.8
4,437,824	-		ECD_04169	0.30	-0.1
4,437,884	+		ECD_04169	0.34	+0.5
4,438,005	+		ECD_04169	0.44	+0.2
4,438,166	+		ECD_04169	0.56	+0.9
4,438,170	+		ECD_04169	0.56	+0.5
4,438,170	+		ECD_04169	0.56	+0.1
4,438,171	-		ECD_04169	0.56	-0.2
4,438,171	-		ECD_04169	0.56	+0.1
4,438,181	-		ECD_04169	0.57	+0.8
4,438,230	+		ECD_04169	0.61	+0.1
4,438,231	-		ECD_04169	0.61	+0.4
4,438,325	+		ECD_04169	0.68	+0.5
4,438,344	+		ECD_04169	0.69	-0.3
4,438,345	-		ECD_04169	0.69	+0.1
4,438,373	+		ECD_04169	0.72	+0.2
4,438,388	+		ECD_04169	0.73	-0.3
4,438,389	-		ECD_04169	0.73	+0.3
4,438,452	+		ECD_04169	0.78	+0.1
4,438,678	-				-0.2
4,438,737	-				+0.2
4,438,746	+				+0.3
4,438,747	-				+0.0
4,438,747	-				+0.3
4,438,747	-				+0.1
4,438,875	+		ECD_04170	0.42	+0.1
4,438,880	+		ECD_04170	0.44	+0.4
4,438,880	+		ECD_04170	0.44	-0.2
4,438,881	-		ECD_04170	0.44	-0.4
4,438,895	+		ECD_04170	0.49	-0.4
4,439,099	-				+0.5
4,439,099	-				-0.3
4,439,099	-				+0.0
4,439,099	-				+0.1
4,439,209	+		ECD_04171	0.16	-0.2
4,439,210	-		ECD_04171	0.16	+0.3
4,439,210	-		ECD_04171	0.16	+0.3
4,439,364	+		ECD_04171	0.30	-0.1
4,439,449	+		ECD_04171	0.37	-0.3
4,439,455	+		ECD_04171	0.38	-0.3
4,439,455	+		ECD_04171	0.38	+0.6
4,439,455	+		ECD_04171	0.38	-0.1
4,439,455	+		ECD_04171	0.38	-0.1
4,439,456	-		ECD_04171	0.38	+0.6
4,439,486	+		ECD_04171	0.40	+0.5
4,439,487	-		ECD_04171	0.40	-0.3
4,439,541	+		ECD_04171	0.45	-0.3
4,439,563	+		ECD_04171	0.47	+1.1
4,439,563	+		ECD_04171	0.47	-0.1
4,439,564	-		ECD_04171	0.47	+0.1
4,439,566	+		ECD_04171	0.48	-0.2
4,439,573	-		ECD_04171	0.48	+0.2
4,439,573	-		ECD_04171	0.48	-0.2
4,439,573	-		ECD_04171	0.48	-0.0
4,439,600	-		ECD_04171	0.51	-0.0
4,439,600	-		ECD_04171	0.51	+0.5
4,439,606	+		ECD_04171	0.51	-0.4
4,439,607	-		ECD_04171	0.51	+0.5
4,439,627	-		ECD_04171	0.53	-0.1
4,439,668	-		ECD_04171	0.57	+0.1
4,439,668	-		ECD_04171	0.57	+1.1
4,439,668	-		ECD_04171	0.57	+0.2
4,439,705	+		ECD_04171	0.60	+0.3
4,439,706	-		ECD_04171	0.60	+0.4
4,439,707	+		ECD_04171	0.60	-0.7