Strain Fitness in Escherichia coli BL21 around ECD_04090

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
4,352,755	+		ECD_04089	0.57	-0.6
4,352,756	-		ECD_04089	0.57	-0.3
4,352,756	-		ECD_04089	0.57	+0.3
4,352,759	+		ECD_04089	0.57	+0.6
4,352,760	-		ECD_04089	0.57	+0.6
4,352,796	+		ECD_04089	0.60	+1.1
4,352,796	+		ECD_04089	0.60	+0.2
4,352,796	+		ECD_04089	0.60	+0.7
4,352,797	-		ECD_04089	0.60	+0.2
4,352,824	+		ECD_04089	0.62	-0.2
4,352,825	-		ECD_04089	0.62	-0.2
4,352,825	-		ECD_04089	0.62	-0.1
4,352,828	+		ECD_04089	0.62	-0.2
4,352,829	-		ECD_04089	0.62	+0.7
4,352,829	-		ECD_04089	0.62	+0.1
4,352,932	+		ECD_04089	0.70	+0.1
4,352,932	+		ECD_04089	0.70	+0.9
4,352,962	+		ECD_04089	0.72	+0.3
4,352,999	-		ECD_04089	0.75	+0.2
4,353,031	+		ECD_04089	0.77	+0.0
4,353,032	-		ECD_04089	0.77	+0.6
4,353,064	+		ECD_04089	0.80	+0.4
4,353,064	+		ECD_04089	0.80	-0.3
4,353,064	+		ECD_04089	0.80	+1.0
4,353,065	-		ECD_04089	0.80	+0.1
4,353,065	-		ECD_04089	0.80	+0.4
4,353,065	-		ECD_04089	0.80	-0.7
4,353,065	-		ECD_04089	0.80	+0.7
4,353,066	+		ECD_04089	0.80	+0.5
4,353,067	-		ECD_04089	0.80	-0.3
4,353,190	+		ECD_04089	0.89	+0.3
4,353,212	+				+0.1
4,353,212	+				+0.3
4,353,213	-				+1.2
4,353,213	-				+0.7
4,353,296	+				-0.0
4,353,314	+				+0.6
4,353,314	+				+0.4
4,353,315	-				-0.1
4,353,332	+				+0.3
4,353,333	-				+0.4
4,353,337	+				-0.3
4,353,337	+				+2.1
4,353,385	-				+0.4
4,353,385	-				-0.3
4,353,398	+				+0.2
4,353,398	+				+0.2
4,353,399	-				+0.2
4,353,447	+				-0.1
4,353,447	+				-0.4
4,353,448	-				+0.4
4,353,448	-				-0.6
4,353,452	+				-0.2
4,353,453	-				+0.0
4,353,457	+				+0.1
4,353,457	+				+0.9
4,353,458	-				-1.0
4,353,458	-				-0.0
4,353,467	+				+0.0
4,353,467	+				+0.2
4,353,468	-				+0.5
4,353,468	-				-0.3
4,353,502	+				-0.5
4,353,512	-				-0.2
4,353,512	-				-0.6
4,353,557	+				+0.3
4,353,641	+				+0.1
4,353,641	+				+1.1
4,353,641	+				+0.4
4,353,641	+				+1.3
4,353,662	-				-0.0
4,353,662	-				+0.2
4,353,731	-		ECD_04090	0.11	-0.1
4,353,757	+		ECD_04090	0.15	-0.2
4,353,963	+		ECD_04090	0.47	+0.7
4,353,964	-		ECD_04090	0.48	-0.3
4,353,976	+		ECD_04090	0.49	-0.6
4,353,976	+		ECD_04090	0.49	+0.5
4,353,977	-		ECD_04090	0.50	+0.9
4,354,008	+		ECD_04090	0.54	+0.1
4,354,068	-		ECD_04090	0.64	+0.5
4,354,069	+		ECD_04090	0.64	+0.1
4,354,070	-		ECD_04090	0.64	-1.1
4,354,081	+		ECD_04090	0.66	+0.5
4,354,183	-		ECD_04090	0.82	+0.6
4,354,284	-				+0.0
4,354,340	+				-0.1
4,354,340	+				+1.1
4,354,366	-				+0.0
4,354,379	-				+0.2
4,354,379	-				+0.3
4,354,385	-				+0.5
4,354,433	+				+0.1
4,354,510	+				+0.3
4,354,511	-				+0.5
4,354,532	+				+0.9
4,354,533	-				+0.1
4,354,580	+				+0.3
4,354,781	+		ECD_04091	0.16	-0.3
4,354,781	+		ECD_04091	0.16	-0.2
4,354,838	+		ECD_04091	0.19	+0.1
4,354,968	+		ECD_04091	0.27	-0.4
4,354,976	-		ECD_04091	0.27	+0.1
4,355,051	-		ECD_04091	0.32	-0.1
4,355,051	-		ECD_04091	0.32	-0.3
4,355,051	-		ECD_04091	0.32	+0.0
4,355,052	+		ECD_04091	0.32	+0.2
4,355,052	+		ECD_04091	0.32	+1.1
4,355,116	+		ECD_04091	0.35	+0.3
4,355,116	+		ECD_04091	0.35	+0.2
4,355,116	+		ECD_04091	0.35	-0.6
4,355,117	-		ECD_04091	0.35	+0.3
4,355,117	-		ECD_04091	0.35	-0.9
4,355,117	-		ECD_04091	0.35	-0.5
4,355,211	+		ECD_04091	0.41	-0.6
4,355,212	-		ECD_04091	0.41	-0.7