Strain Fitness in Escherichia coli BL21 around ECD_03983

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
4,238,345	+		ECD_03982	0.51	+0.2
4,238,372	+		ECD_03982	0.53	+0.1
4,238,372	+		ECD_03982	0.53	-0.3
4,238,372	+		ECD_03982	0.53	+0.2
4,238,372	+		ECD_03982	0.53	+0.1
4,238,372	+		ECD_03982	0.53	+0.3
4,238,372	+		ECD_03982	0.53	+0.1
4,238,372	+		ECD_03982	0.53	-0.0
4,238,372	+		ECD_03982	0.53	+0.6
4,238,373	-		ECD_03982	0.53	-0.2
4,238,373	-		ECD_03982	0.53	-0.8
4,238,373	-		ECD_03982	0.53	+0.6
4,238,404	-		ECD_03982	0.55	-0.6
4,238,406	+		ECD_03982	0.55	+0.7
4,238,406	+		ECD_03982	0.55	-0.0
4,238,406	+		ECD_03982	0.55	+0.1
4,238,406	+		ECD_03982	0.55	+0.0
4,238,406	+		ECD_03982	0.55	-0.1
4,238,407	-		ECD_03982	0.55	-0.2
4,238,407	-		ECD_03982	0.55	+0.4
4,238,407	-		ECD_03982	0.55	-0.8
4,238,407	-		ECD_03982	0.55	-0.1
4,238,407	-		ECD_03982	0.55	+0.6
4,238,421	+		ECD_03982	0.56	+0.1
4,238,421	+		ECD_03982	0.56	+0.1
4,238,422	-		ECD_03982	0.56	+1.1
4,238,422	-		ECD_03982	0.56	+0.3
4,238,422	-		ECD_03982	0.56	-1.8
4,238,424	-		ECD_03982	0.56	+1.0
4,238,433	+		ECD_03982	0.57	+0.5
4,238,454	+		ECD_03982	0.58	+0.3
4,238,480	+		ECD_03982	0.60	-0.3
4,238,501	+		ECD_03982	0.61	-0.5
4,238,566	+		ECD_03982	0.66	+1.1
4,238,567	-		ECD_03982	0.66	-0.0
4,238,675	+		ECD_03982	0.73	-1.0
4,238,675	+		ECD_03982	0.73	+0.2
4,238,702	+		ECD_03982	0.75	-0.1
4,238,703	-		ECD_03982	0.75	+0.0
4,238,759	+		ECD_03982	0.78	+0.1
4,238,760	-		ECD_03982	0.78	+0.6
4,238,844	+		ECD_03982	0.84	-0.1
4,238,858	-		ECD_03982	0.85	+0.6
4,238,875	+		ECD_03982	0.86	+0.1
4,238,946	-				-0.1
4,238,985	-				+0.2
4,239,008	+				-0.1
4,239,044	+				+0.0
4,239,081	+				-0.7
4,239,081	+				+0.8
4,239,081	+				+0.1
4,239,117	-				+0.5
4,239,137	-				+0.4
4,239,210	+		ECD_04388	0.17	+0.2
4,239,261	+				-0.1
4,239,261	+				-0.1
4,239,263	+				-1.0
4,239,368	-				-0.5
4,239,382	+		ECD_03983	0.11	-1.8
4,239,382	+		ECD_03983	0.11	-1.0
4,239,421	+		ECD_03983	0.15	-1.1
4,239,422	-		ECD_03983	0.15	-1.1
4,239,422	-		ECD_03983	0.15	-1.2
4,239,521	-		ECD_03983	0.24	-0.6
4,239,642	-		ECD_03983	0.35	-1.5
4,239,673	+		ECD_03983	0.38	-1.7
4,239,674	-		ECD_03983	0.38	-1.3
4,239,687	+		ECD_03983	0.39	-0.8
4,239,687	+		ECD_03983	0.39	-2.0
4,239,688	-		ECD_03983	0.39	-1.3
4,239,719	+		ECD_03983	0.42	-0.8
4,239,719	+		ECD_03983	0.42	-1.4
4,239,720	-		ECD_03983	0.42	-1.2
4,239,720	-		ECD_03983	0.42	-1.1
4,239,824	+		ECD_03983	0.52	-0.8
4,239,825	-		ECD_03983	0.52	-0.9
4,240,109	+		ECD_03983	0.78	-1.2
4,240,241	-		ECD_03983	0.90	-1.3
4,240,387	+				-1.0
4,240,387	+				-1.9
4,240,387	+				-0.2
4,240,388	-				-1.0
4,240,388	-				-1.1
4,240,388	-				-0.9
4,240,388	-				-0.8
4,240,388	-				-0.8
4,240,388	-				-0.8
4,240,388	-				-0.9
4,240,388	-				-1.0
4,240,389	+				-0.9
4,240,390	-				-1.1
4,240,493	-		ECD_03984	0.20	-1.1
4,240,494	+		ECD_03984	0.20	-1.7
4,240,494	+		ECD_03984	0.20	-0.8
4,240,494	+		ECD_03984	0.20	-0.9
4,240,494	+		ECD_03984	0.20	-1.5
4,240,494	+		ECD_03984	0.20	-0.7
4,240,494	+		ECD_03984	0.20	-1.2
4,240,494	+		ECD_03984	0.20	+0.3
4,240,495	-		ECD_03984	0.20	-1.1
4,240,495	-		ECD_03984	0.20	-1.2
4,240,495	-		ECD_03984	0.20	-0.4
4,240,495	-		ECD_03984	0.20	+0.8
4,240,495	-		ECD_03984	0.20	-0.8
4,240,495	-		ECD_03984	0.20	-0.9
4,240,495	-		ECD_03984	0.20	-1.0
4,240,495	-		ECD_03984	0.20	-0.6
4,240,495	-		ECD_03984	0.20	-1.8
4,240,567	-		ECD_03984	0.31	-1.0
4,240,567	-		ECD_03984	0.31	-0.8
4,240,607	+		ECD_03984	0.37	-0.2
4,240,608	-		ECD_03984	0.37	-1.4
4,240,624	+		ECD_03984	0.39	-0.6
4,240,670	-		ECD_03984	0.46	-1.1
4,240,738	-		ECD_03984	0.56	-1.6
4,240,819	-		ECD_03984	0.68	-1.0
4,241,058	+				-0.4
4,241,059	-				+0.4
4,241,079	-				+0.4
4,241,079	-				-0.6
4,241,099	-				+0.1
4,241,120	-				-0.2
4,241,120	-				+0.2
4,241,255	+		ECD_03985	0.14	+0.1
4,241,255	+		ECD_03985	0.14	-0.3
4,241,273	+		ECD_03985	0.15	-1.0
4,241,273	+		ECD_03985	0.15	+0.1
4,241,273	+		ECD_03985	0.15	-0.6
4,241,274	-		ECD_03985	0.15	-0.1
4,241,274	-		ECD_03985	0.15	+0.3
4,241,290	+		ECD_03985	0.16	-0.6