Strain Fitness in Escherichia coli BL21 around ECD_03847

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
4,066,707	-				+0.4
4,066,745	+				-1.0
4,066,751	-				-1.2
4,066,767	+				+0.3
4,066,796	+				-1.1
4,066,997	+		ECD_03846	0.22	-1.6
4,067,114	+		ECD_03846	0.35	-1.0
4,067,114	+		ECD_03846	0.35	-0.6
4,067,114	+		ECD_03846	0.35	-1.3
4,067,114	+		ECD_03846	0.35	-0.8
4,067,114	+		ECD_03846	0.35	-1.1
4,067,114	+		ECD_03846	0.35	-1.4
4,067,115	-		ECD_03846	0.35	-1.1
4,067,117	+		ECD_03846	0.36	-0.8
4,067,117	+		ECD_03846	0.36	-0.9
4,067,158	-		ECD_03846	0.40	-1.9
4,067,186	-		ECD_03846	0.43	-1.4
4,067,294	+		ECD_03846	0.55	-1.4
4,067,294	+		ECD_03846	0.55	-1.2
4,067,295	-		ECD_03846	0.55	+0.2
4,067,298	+		ECD_03846	0.55	-0.9
4,067,298	+		ECD_03846	0.55	-1.0
4,067,298	+		ECD_03846	0.55	+0.1
4,067,299	-		ECD_03846	0.55	+0.2
4,067,299	-		ECD_03846	0.55	-0.8
4,067,492	+		ECD_03846	0.76	-0.9
4,067,556	+		ECD_03846	0.83	-1.0
4,067,557	-		ECD_03846	0.83	-1.5
4,067,604	+		ECD_03846	0.89	-1.4
4,067,635	-				-0.8
4,067,756	+				-0.7
4,067,756	+				-1.6
4,067,756	+				-1.1
4,067,757	-				-1.3
4,067,757	-				-1.8
4,067,757	-				-1.0
4,067,757	-				-1.0
4,068,041	-		ECD_03847	0.25	-1.2
4,068,056	+		ECD_03847	0.26	-3.3
4,068,196	+		ECD_03847	0.36	-0.8
4,068,197	-		ECD_03847	0.36	-1.0
4,068,197	-		ECD_03847	0.36	-0.9
4,068,197	-		ECD_03847	0.36	-1.2
4,068,418	+		ECD_03847	0.52	-0.6
4,068,547	+		ECD_03847	0.61	-0.9
4,068,548	-		ECD_03847	0.61	-1.4
4,068,548	-		ECD_03847	0.61	-1.9
4,068,551	+		ECD_03847	0.61	-0.8
4,068,551	+		ECD_03847	0.61	+0.1
4,068,552	-		ECD_03847	0.61	-0.6
4,068,556	-		ECD_03847	0.62	-0.9
4,068,556	-		ECD_03847	0.62	-0.7
4,068,556	-		ECD_03847	0.62	-1.4
4,068,556	-		ECD_03847	0.62	-0.0
4,068,601	+		ECD_03847	0.65	-1.1
4,068,722	+		ECD_03847	0.74	-1.9
4,068,722	+		ECD_03847	0.74	-0.7
4,068,723	-		ECD_03847	0.74	-0.3
4,068,723	-		ECD_03847	0.74	-1.6
4,068,723	-		ECD_03847	0.74	-0.4
4,068,723	-		ECD_03847	0.74	-2.0
4,068,723	-		ECD_03847	0.74	-1.4
4,068,756	+		ECD_03847	0.76	-0.6
4,068,757	-		ECD_03847	0.76	-1.1
4,068,770	+		ECD_03847	0.77	-1.8
4,068,778	+		ECD_03847	0.78	+0.1
4,068,778	+		ECD_03847	0.78	-1.0
4,068,779	-		ECD_03847	0.78	-0.3
4,069,057	-				-1.0
4,069,057	-				-0.6
4,069,059	+				-1.0
4,069,060	-				-3.1
4,069,060	-				+0.0
4,069,060	-				-0.5
4,069,060	-				+0.3
4,069,060	-				-0.3
4,069,060	-				-1.5
4,069,073	-				-1.4
4,069,101	+				-0.9
4,069,117	+				-1.2
4,069,118	-				-1.4
4,069,118	-				-1.2
4,069,175	-				+0.0
4,069,183	-				+0.2
4,069,185	-				+0.0
4,069,216	+				+0.5
4,069,290	+				+0.1
4,069,320	+				+0.3
4,069,321	-				+0.4
4,069,321	-				+0.8
4,069,321	-				+0.8
4,069,321	-				-0.2
4,069,321	-				+0.0
4,069,327	+				+0.4
4,069,368	-				+0.7
4,069,384	-				-0.3
4,069,385	+				+0.5
4,069,385	+				+0.1
4,069,385	+				-0.0
4,069,397	+				+0.1
4,069,432	+				+0.5
4,069,432	+				-0.2
4,069,433	-				-0.0
4,069,492	+		ECD_03848	0.18	+0.2
4,069,492	+		ECD_03848	0.18	+0.6
4,069,727	+		ECD_03848	0.51	+0.4
4,069,727	+		ECD_03848	0.51	-0.1
4,069,728	-		ECD_03848	0.51	+0.4
4,069,728	-		ECD_03848	0.51	-0.2
4,069,750	+		ECD_03848	0.54	+0.2
4,069,751	-		ECD_03848	0.54	+0.1
4,069,836	+		ECD_03848	0.66	-0.7
4,069,960	+		ECD_03848	0.84	+0.7
4,069,961	-		ECD_03848	0.84	+0.3
4,069,961	-		ECD_03848	0.84	+0.2
4,070,007	+				+0.2
4,070,007	+				+0.1
4,070,007	+				+1.1
4,070,007	+				+0.1
4,070,008	-				+0.2