Strain Fitness in Escherichia coli BL21 around ECD_03842

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
4,061,049	+		ECD_03841	0.77	-1.4
4,061,050	-		ECD_03841	0.78	-1.0
4,061,084	+		ECD_03841	0.79	-0.7
4,061,141	-		ECD_03841	0.81	-0.7
4,061,150	+		ECD_03841	0.81	-1.0
4,061,151	-		ECD_03841	0.81	-1.6
4,061,211	-		ECD_03841	0.84	-1.1
4,061,219	+		ECD_03841	0.84	-1.4
4,061,318	+		ECD_03841	0.88	-1.1
4,061,319	-		ECD_03841	0.88	-1.2
4,061,528	+				-2.7
4,061,528	+				-1.6
4,061,529	-				-1.3
4,061,529	-				-0.9
4,061,606	+				-0.8
4,061,606	+				-1.6
4,061,607	-				-1.1
4,061,607	-				-1.5
4,061,607	-				-0.7
4,061,607	-				-1.6
4,061,616	-				-1.5
4,061,618	+				-1.2
4,061,618	+				-1.1
4,061,619	-				-1.3
4,061,619	-				-1.2
4,061,634	-				-0.2
4,061,645	+				-1.0
4,061,645	+				-1.5
4,061,668	-				+0.4
4,061,668	-				+0.3
4,061,678	-				-0.2
4,061,678	-				+0.4
4,061,686	-				+0.2
4,061,712	-				+0.1
4,061,742	-				+0.1
4,061,799	+				-0.1
4,061,804	-				+0.1
4,061,823	-				+0.0
4,061,839	-				+1.0
4,061,842	+				-0.0
4,061,849	-				+0.1
4,061,849	-				+0.8
4,061,853	+				-0.4
4,061,877	+				+0.2
4,061,877	+				+0.2
4,061,881	+				+0.8
4,061,881	+				-0.5
4,061,881	+				+0.2
4,061,904	+				+0.3
4,061,932	+				+0.0
4,061,933	-				-0.2
4,061,999	-				+0.1
4,062,021	+				-0.7
4,062,050	+				-2.1
4,062,050	+				-1.3
4,062,051	-				-1.8
4,062,051	-				-1.2
4,062,140	+		ECD_03842	0.12	-0.1
4,062,160	+		ECD_03842	0.14	-1.0
4,062,160	+		ECD_03842	0.14	-1.8
4,062,161	-		ECD_03842	0.14	-1.2
4,062,161	-		ECD_03842	0.14	-0.8
4,062,161	-		ECD_03842	0.14	-2.2
4,062,161	-		ECD_03842	0.14	-1.5
4,062,235	+		ECD_03842	0.21	-1.3
4,062,236	-		ECD_03842	0.21	-0.7
4,062,326	+		ECD_03842	0.29	-1.8
4,062,327	-		ECD_03842	0.29	-2.3
4,062,368	+		ECD_03842	0.32	-1.2
4,062,368	+		ECD_03842	0.32	-2.5
4,062,368	+		ECD_03842	0.32	-0.4
4,062,369	-		ECD_03842	0.32	-1.2
4,062,392	+		ECD_03842	0.34	+0.1
4,062,393	-		ECD_03842	0.34	-1.9
4,062,398	+		ECD_03842	0.35	-1.5
4,062,398	+		ECD_03842	0.35	-1.5
4,062,419	+		ECD_03842	0.37	-0.6
4,062,420	-		ECD_03842	0.37	+0.6
4,062,437	+		ECD_03842	0.38	-1.1
4,062,438	-		ECD_03842	0.38	-1.7
4,062,469	+		ECD_03842	0.41	-0.9
4,062,503	+		ECD_03842	0.44	-2.9
4,062,504	-		ECD_03842	0.44	-1.9
4,062,504	-		ECD_03842	0.44	-1.1
4,062,525	+		ECD_03842	0.46	-1.1
4,062,525	+		ECD_03842	0.46	-1.7
4,062,525	+		ECD_03842	0.46	-2.4
4,062,526	-		ECD_03842	0.46	-1.3
4,062,526	-		ECD_03842	0.46	+0.6
4,062,540	-		ECD_03842	0.47	-1.1
4,062,602	+		ECD_03842	0.53	-1.4
4,062,602	+		ECD_03842	0.53	-1.4
4,062,602	+		ECD_03842	0.53	-1.3
4,062,603	-		ECD_03842	0.53	-2.0
4,062,603	-		ECD_03842	0.53	-1.1
4,062,603	-		ECD_03842	0.53	-1.2
4,062,611	+		ECD_03842	0.53	-1.0
4,062,611	+		ECD_03842	0.53	-1.7
4,062,611	+		ECD_03842	0.53	-0.0
4,062,611	+		ECD_03842	0.53	-1.6
4,062,611	+		ECD_03842	0.53	-1.7
4,062,612	-		ECD_03842	0.53	-1.2
4,062,612	-		ECD_03842	0.53	-1.7
4,062,612	-		ECD_03842	0.53	-1.1
4,062,612	-		ECD_03842	0.53	-0.7
4,062,612	-		ECD_03842	0.53	-0.8
4,062,630	+		ECD_03842	0.55	-2.1
4,062,691	+		ECD_03842	0.60	-1.4
4,062,739	+		ECD_03842	0.64	-2.0
4,062,740	-		ECD_03842	0.64	-1.4
4,062,908	+		ECD_03842	0.79	-0.7
4,062,908	+		ECD_03842	0.79	-1.1
4,062,909	-		ECD_03842	0.79	-0.8
4,062,909	-		ECD_03842	0.79	-0.8
4,062,960	-		ECD_03842	0.84	-1.5
4,063,045	-				-1.2
4,063,087	-				-1.4
4,063,225	+				-0.2
4,063,259	-				-1.3
4,063,259	-				-1.2
4,063,282	+				-1.0
4,063,282	+				+0.3
4,063,282	+				+0.1
4,063,282	+				-0.3
4,063,282	+				-0.3
4,063,282	+				+0.3
4,063,282	+				+0.6
4,063,282	+				-0.3
4,063,283	-				-1.0
4,063,283	-				-1.2
4,063,283	-				-0.6
4,063,283	-				-0.8
4,063,283	-				-1.5
4,063,351	+				-1.5
4,063,351	+				-1.7
4,063,359	+				-1.1
4,063,359	+				-1.2
4,063,360	-				-1.0
4,063,364	-				-1.2
4,063,387	+				-1.6
4,063,456	+		ECD_03843	0.15	-1.1
4,063,497	-		ECD_03843	0.19	-0.7
4,063,525	+		ECD_03843	0.22	-1.4
4,063,525	+		ECD_03843	0.22	-2.7
4,063,553	+		ECD_03843	0.25	-0.7
4,063,641	+		ECD_03843	0.34	-0.7
4,063,641	+		ECD_03843	0.34	-1.6
4,063,642	-		ECD_03843	0.34	-0.6
4,063,654	-		ECD_03843	0.35	-1.6
4,063,661	+		ECD_03843	0.36	-1.0
4,063,661	+		ECD_03843	0.36	-0.8
4,063,698	+		ECD_03843	0.39	-1.3
4,063,699	-		ECD_03843	0.40	-0.5
4,063,729	+		ECD_03843	0.42	-0.7
4,063,875	-		ECD_03843	0.57	-1.5
4,063,920	+		ECD_03843	0.61	-2.0
4,063,931	+		ECD_03843	0.63	-1.4
4,063,931	+		ECD_03843	0.63	-1.3
4,063,979	+		ECD_03843	0.67	-1.5
4,063,979	+		ECD_03843	0.67	-1.3
4,063,980	-		ECD_03843	0.67	-1.5
4,064,091	+		ECD_03843	0.79	-1.5
4,064,099	+		ECD_03843	0.79	-1.0
4,064,118	+		ECD_03843	0.81	-1.6