Strain Fitness in Escherichia coli BL21 around ECD_03841

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
4,058,050	-		ECD_03840	0.56	+0.1
4,058,097	-		ECD_03840	0.59	-1.0
4,058,097	-		ECD_03840	0.59	+0.5
4,058,135	-		ECD_03840	0.61	-0.6
4,058,135	-		ECD_03840	0.61	+0.1
4,058,156	-		ECD_03840	0.62	+0.3
4,058,206	-		ECD_03840	0.65	-0.3
4,058,299	+		ECD_03840	0.70	+0.2
4,058,299	+		ECD_03840	0.70	-0.3
4,058,299	+		ECD_03840	0.70	+0.1
4,058,300	-		ECD_03840	0.70	+0.3
4,058,300	-		ECD_03840	0.70	+0.0
4,058,331	+		ECD_03840	0.72	-0.2
4,058,355	+		ECD_03840	0.74	-0.2
4,058,356	-		ECD_03840	0.74	-0.0
4,058,356	-		ECD_03840	0.74	+0.2
4,058,375	-		ECD_03840	0.75	-0.9
4,058,376	+		ECD_03840	0.75	-0.5
4,058,376	+		ECD_03840	0.75	+0.3
4,058,377	-		ECD_03840	0.75	-0.0
4,058,377	-		ECD_03840	0.75	-0.2
4,058,377	-		ECD_03840	0.75	+0.2
4,058,377	-		ECD_03840	0.75	+0.2
4,058,422	-		ECD_03840	0.77	-0.2
4,058,465	+		ECD_03840	0.80	-0.0
4,058,466	-		ECD_03840	0.80	-0.8
4,058,466	-		ECD_03840	0.80	+0.2
4,058,466	-		ECD_03840	0.80	+0.5
4,058,538	+		ECD_03840	0.84	+0.9
4,058,547	+		ECD_03840	0.85	-0.2
4,058,547	+		ECD_03840	0.85	-0.3
4,058,547	+		ECD_03840	0.85	+0.0
4,058,548	-		ECD_03840	0.85	-1.0
4,058,548	-		ECD_03840	0.85	-0.5
4,058,548	-		ECD_03840	0.85	-0.2
4,058,548	-		ECD_03840	0.85	-0.0
4,058,548	-		ECD_03840	0.85	+0.3
4,058,550	+		ECD_03840	0.85	-0.7
4,058,551	-		ECD_03840	0.85	-0.3
4,058,551	-		ECD_03840	0.85	-0.3
4,058,606	-		ECD_03840	0.88	-0.1
4,058,692	+				-0.9
4,058,693	-				+0.2
4,058,707	-				-0.0
4,058,710	+				-0.5
4,058,711	-				+0.1
4,058,711	-				+0.2
4,058,729	-				-0.3
4,058,746	-				-0.6
4,058,788	+				-0.3
4,058,812	+				+0.1
4,058,812	+				-0.4
4,058,812	+				+1.1
4,058,813	-				-0.3
4,058,813	-				+0.1
4,058,813	-				+0.3
4,058,815	+				+0.2
4,058,815	+				+0.2
4,058,815	+				-0.2
4,058,816	-				+0.2
4,058,816	-				-0.0
4,058,816	-				+0.5
4,058,816	-				+0.0
4,058,879	-				-0.1
4,058,879	-				+0.0
4,058,913	-				-0.1
4,058,913	-				+0.2
4,058,932	+				+0.4
4,058,943	+				+0.0
4,058,943	+				-0.1
4,059,012	-				-0.8
4,059,012	-				-1.1
4,059,124	-				-0.9
4,059,143	-				-1.1
4,059,154	-				-0.9
4,059,162	-				-1.3
4,059,253	-				-1.5
4,059,260	+		ECD_03841	0.10	-1.2
4,059,301	+		ECD_03841	0.12	-0.9
4,059,305	-		ECD_03841	0.12	-2.2
4,059,305	-		ECD_03841	0.12	-1.6
4,059,305	-		ECD_03841	0.12	-1.3
4,059,305	-		ECD_03841	0.12	-1.0
4,059,440	+		ECD_03841	0.17	-1.9
4,059,510	+		ECD_03841	0.19	-1.2
4,059,511	-		ECD_03841	0.19	-2.0
4,059,604	+		ECD_03841	0.23	-1.5
4,059,604	+		ECD_03841	0.23	-1.1
4,059,605	-		ECD_03841	0.23	-1.6
4,059,605	-		ECD_03841	0.23	-0.2
4,059,631	-		ECD_03841	0.24	-1.1
4,059,635	-		ECD_03841	0.24	-0.7
4,059,635	-		ECD_03841	0.24	-1.5
4,059,788	+		ECD_03841	0.30	-1.9
4,059,955	-		ECD_03841	0.36	-0.7
4,059,955	-		ECD_03841	0.36	-1.2
4,060,067	-		ECD_03841	0.40	-0.5
4,060,197	+		ECD_03841	0.45	-0.4
4,060,198	-		ECD_03841	0.45	-1.2
4,060,231	+		ECD_03841	0.47	-2.1
4,060,231	+		ECD_03841	0.47	-1.5
4,060,277	+		ECD_03841	0.48	-1.3
4,060,394	-		ECD_03841	0.53	-1.0
4,060,539	-		ECD_03841	0.58	-0.8
4,060,567	+		ECD_03841	0.59	-0.7
4,060,568	-		ECD_03841	0.59	-1.3
4,060,712	-		ECD_03841	0.65	-1.1
4,060,799	+		ECD_03841	0.68	-1.5
4,060,911	-		ECD_03841	0.72	-1.1
4,060,995	+		ECD_03841	0.75	-1.4
4,061,049	+		ECD_03841	0.77	-1.4
4,061,050	-		ECD_03841	0.78	-1.0
4,061,084	+		ECD_03841	0.79	-0.7
4,061,141	-		ECD_03841	0.81	-0.7
4,061,150	+		ECD_03841	0.81	-1.0
4,061,151	-		ECD_03841	0.81	-1.6
4,061,211	-		ECD_03841	0.84	-1.1
4,061,219	+		ECD_03841	0.84	-1.4
4,061,318	+		ECD_03841	0.88	-1.1
4,061,319	-		ECD_03841	0.88	-1.2
4,061,528	+				-2.7
4,061,528	+				-1.6
4,061,529	-				-1.3
4,061,529	-				-0.9
4,061,606	+				-0.8
4,061,606	+				-1.6
4,061,607	-				-1.1
4,061,607	-				-1.5
4,061,607	-				-0.7
4,061,607	-				-1.6
4,061,616	-				-1.5
4,061,618	+				-1.2
4,061,618	+				-1.1
4,061,619	-				-1.3
4,061,619	-				-1.2
4,061,634	-				-0.2
4,061,645	+				-1.0
4,061,645	+				-1.5
4,061,668	-				+0.4
4,061,668	-				+0.3
4,061,678	-				-0.2
4,061,678	-				+0.4
4,061,686	-				+0.2
4,061,712	-				+0.1
4,061,742	-				+0.1
4,061,799	+				-0.1
4,061,804	-				+0.1
4,061,823	-				+0.0
4,061,839	-				+1.0
4,061,842	+				-0.0
4,061,849	-				+0.1
4,061,849	-				+0.8
4,061,853	+				-0.4
4,061,877	+				+0.2
4,061,877	+				+0.2
4,061,881	+				+0.8
4,061,881	+				-0.5
4,061,881	+				+0.2
4,061,904	+				+0.3
4,061,932	+				+0.0
4,061,933	-				-0.2
4,061,999	-				+0.1
4,062,021	+				-0.7
4,062,050	+				-2.1
4,062,050	+				-1.3
4,062,051	-				-1.8
4,062,051	-				-1.2
4,062,140	+		ECD_03842	0.12	-0.1
4,062,160	+		ECD_03842	0.14	-1.0
4,062,160	+		ECD_03842	0.14	-1.8
4,062,161	-		ECD_03842	0.14	-1.2
4,062,161	-		ECD_03842	0.14	-0.8
4,062,161	-		ECD_03842	0.14	-2.2
4,062,161	-		ECD_03842	0.14	-1.5
4,062,235	+		ECD_03842	0.21	-1.3
4,062,236	-		ECD_03842	0.21	-0.7
4,062,326	+		ECD_03842	0.29	-1.8
4,062,327	-		ECD_03842	0.29	-2.3
4,062,368	+		ECD_03842	0.32	-1.2
4,062,368	+		ECD_03842	0.32	-2.5
4,062,368	+		ECD_03842	0.32	-0.4
4,062,369	-		ECD_03842	0.32	-1.2
4,062,392	+		ECD_03842	0.34	+0.1
4,062,393	-		ECD_03842	0.34	-1.9
4,062,398	+		ECD_03842	0.35	-1.5
4,062,398	+		ECD_03842	0.35	-1.5
4,062,419	+		ECD_03842	0.37	-0.6
4,062,420	-		ECD_03842	0.37	+0.6
4,062,437	+		ECD_03842	0.38	-1.1
4,062,438	-		ECD_03842	0.38	-1.7
4,062,469	+		ECD_03842	0.41	-0.9
4,062,503	+		ECD_03842	0.44	-2.9
4,062,504	-		ECD_03842	0.44	-1.9
4,062,504	-		ECD_03842	0.44	-1.1
4,062,525	+		ECD_03842	0.46	-1.1
4,062,525	+		ECD_03842	0.46	-1.7
4,062,525	+		ECD_03842	0.46	-2.4
4,062,526	-		ECD_03842	0.46	-1.3
4,062,526	-		ECD_03842	0.46	+0.6
4,062,540	-		ECD_03842	0.47	-1.1
4,062,602	+		ECD_03842	0.53	-1.4
4,062,602	+		ECD_03842	0.53	-1.4
4,062,602	+		ECD_03842	0.53	-1.3
4,062,603	-		ECD_03842	0.53	-2.0
4,062,603	-		ECD_03842	0.53	-1.1
4,062,603	-		ECD_03842	0.53	-1.2
4,062,611	+		ECD_03842	0.53	-1.0
4,062,611	+		ECD_03842	0.53	-1.7
4,062,611	+		ECD_03842	0.53	-0.0
4,062,611	+		ECD_03842	0.53	-1.6
4,062,611	+		ECD_03842	0.53	-1.7
4,062,612	-		ECD_03842	0.53	-1.2
4,062,612	-		ECD_03842	0.53	-1.7
4,062,612	-		ECD_03842	0.53	-1.1
4,062,612	-		ECD_03842	0.53	-0.7
4,062,612	-		ECD_03842	0.53	-0.8
4,062,630	+		ECD_03842	0.55	-2.1