Strain Fitness in Escherichia coli BL21 around ECD_03639

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
3,827,475	+				+0.2
3,827,475	+				+0.7
3,827,476	-				+0.2
3,827,476	-				+0.1
3,827,476	-				+1.6
3,827,476	-				+0.6
3,827,476	-				+0.3
3,827,478	+				+0.2
3,827,478	+				-0.8
3,827,478	+				+0.2
3,827,479	-				+0.1
3,827,479	-				+0.5
3,827,479	-				+0.2
3,827,480	+				+0.0
3,827,481	-				+0.1
3,827,508	-				+0.0
3,827,526	-				+0.8
3,827,526	-				+0.1
3,827,580	-				-0.5
3,827,647	-		ECD_03638	0.11	+0.7
3,827,700	-		ECD_03638	0.17	+0.2
3,827,790	-		ECD_03638	0.27	-0.1
3,827,873	+		ECD_03638	0.36	-0.7
3,827,874	-		ECD_03638	0.36	+0.4
3,827,874	-		ECD_03638	0.36	-0.1
3,827,933	+		ECD_03638	0.42	-0.3
3,827,934	-		ECD_03638	0.42	+0.5
3,827,934	-		ECD_03638	0.42	+0.3
3,827,956	+		ECD_03638	0.45	-0.0
3,828,017	+		ECD_03638	0.51	-0.1
3,828,023	+		ECD_03638	0.52	-0.5
3,828,035	+		ECD_03638	0.53	-0.2
3,828,089	+		ECD_03638	0.59	+0.4
3,828,089	+		ECD_03638	0.59	+0.7
3,828,090	-		ECD_03638	0.59	+0.1
3,828,093	-		ECD_03638	0.59	-2.2
3,828,093	-		ECD_03638	0.59	+0.0
3,828,172	+		ECD_03638	0.68	+0.0
3,828,172	+		ECD_03638	0.68	-1.4
3,828,172	+		ECD_03638	0.68	+0.4
3,828,206	+		ECD_03638	0.72	+0.2
3,828,227	-		ECD_03638	0.74	+0.1
3,828,306	-		ECD_03638	0.82	-0.3
3,828,323	-		ECD_03638	0.84	+0.4
3,828,405	-				+0.5
3,828,480	-				+0.3
3,828,594	-		ECD_03639	0.12	+0.1
3,828,594	-		ECD_03639	0.12	+0.2
3,828,653	+		ECD_03639	0.18	+0.1
3,828,653	+		ECD_03639	0.18	-0.2
3,828,653	+		ECD_03639	0.18	+0.0
3,828,653	+		ECD_03639	0.18	+0.1
3,828,654	-		ECD_03639	0.18	+0.2
3,828,654	-		ECD_03639	0.18	+0.1
3,828,654	-		ECD_03639	0.18	-0.2
3,828,654	-		ECD_03639	0.18	-0.0
3,828,693	+		ECD_03639	0.22	+1.8
3,828,743	+		ECD_03639	0.27	+0.2
3,828,743	+		ECD_03639	0.27	+0.2
3,828,743	+		ECD_03639	0.27	-0.3
3,828,744	-		ECD_03639	0.27	-1.0
3,828,744	-		ECD_03639	0.27	+1.0
3,828,762	-		ECD_03639	0.29	+0.3
3,828,942	-		ECD_03639	0.47	-0.6
3,828,973	+		ECD_03639	0.50	+0.3
3,828,974	-		ECD_03639	0.50	-0.7
3,828,974	-		ECD_03639	0.50	-0.1
3,828,974	-		ECD_03639	0.50	+0.4
3,829,233	+		ECD_03639	0.76	+0.2
3,829,244	-		ECD_03639	0.78	-0.1
3,829,245	+		ECD_03639	0.78	-0.4
3,829,245	+		ECD_03639	0.78	+0.4
3,829,246	-		ECD_03639	0.78	-0.2
3,829,246	-		ECD_03639	0.78	+0.2
3,829,246	-		ECD_03639	0.78	+0.3
3,829,290	+		ECD_03639	0.82	+0.7
3,829,317	-		ECD_03639	0.85	+0.1
3,829,381	+				+0.5
3,829,382	-				-0.1
3,829,426	+				+0.1
3,829,434	-				+0.4
3,829,465	-				-0.3
3,829,471	-				-0.0
3,829,491	+				-0.2
3,829,542	+				+0.0
3,829,543	-				-0.6
3,829,543	-				+0.8
3,829,545	+				+1.0
3,829,545	+				+0.6
3,829,546	-				-0.6
3,829,566	+				+0.4
3,829,566	+				-0.3
3,829,566	+				-1.6
3,829,566	+				+0.1
3,829,566	+				-0.3
3,829,566	+				-0.1
3,829,567	-				-0.2
3,829,567	-				-0.4
3,829,567	-				+0.2
3,829,567	-				-0.1
3,829,567	-				+0.1
3,829,567	-				+0.3
3,829,567	-				+0.8
3,829,567	-				+1.2
3,829,567	-				+0.1
3,829,567	-				-0.5
3,829,611	-		ECD_03640	0.13	+0.6
3,829,633	+		ECD_03640	0.14	-0.0
3,829,646	-		ECD_03640	0.15	+0.3
3,829,759	-		ECD_03640	0.23	+0.4
3,829,771	+		ECD_03640	0.24	+0.3
3,829,772	-		ECD_03640	0.24	+0.7
3,829,772	-		ECD_03640	0.24	+0.6
3,829,772	-		ECD_03640	0.24	-0.1
3,829,848	+		ECD_03640	0.29	+0.6
3,829,849	-		ECD_03640	0.29	+0.3
3,829,868	-		ECD_03640	0.31	-0.0
3,829,868	-		ECD_03640	0.31	+0.4
3,829,872	+		ECD_03640	0.31	+1.2
3,829,872	+		ECD_03640	0.31	+0.8
3,829,873	-		ECD_03640	0.31	+0.1
3,829,873	-		ECD_03640	0.31	+0.3
3,829,894	+		ECD_03640	0.32	-0.1
3,829,895	-		ECD_03640	0.32	+0.7
3,829,923	+		ECD_03640	0.34	+0.5
3,829,924	-		ECD_03640	0.34	+1.4
3,829,933	+		ECD_03640	0.35	+0.6
3,829,933	+		ECD_03640	0.35	-0.6
3,829,934	-		ECD_03640	0.35	-0.1
3,829,953	+		ECD_03640	0.36	+1.1
3,829,953	+		ECD_03640	0.36	+0.1
3,829,954	-		ECD_03640	0.37	+0.2
3,829,954	-		ECD_03640	0.37	+0.2
3,830,008	-		ECD_03640	0.40	-0.8
3,830,102	-		ECD_03640	0.47	-0.4
3,830,136	-		ECD_03640	0.49	+0.9
3,830,209	+		ECD_03640	0.54	-0.3
3,830,210	-		ECD_03640	0.54	+0.2
3,830,304	+		ECD_03640	0.61	+0.5
3,830,304	+		ECD_03640	0.61	+0.2
3,830,304	+		ECD_03640	0.61	+0.6
3,830,304	+		ECD_03640	0.61	+0.0
3,830,304	+		ECD_03640	0.61	+0.4
3,830,305	-		ECD_03640	0.61	-0.0
3,830,305	-		ECD_03640	0.61	+1.6
3,830,305	-		ECD_03640	0.61	+0.1
3,830,335	-		ECD_03640	0.63	+0.7
3,830,339	-		ECD_03640	0.64	+1.0
3,830,339	-		ECD_03640	0.64	-0.3
3,830,347	-		ECD_03640	0.64	+1.6