Strain Fitness in Escherichia coli BL21 around ECD_03139
Experiment: Mixed culture, Halobacteriovorax-10
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-10 |
|---|---|---|---|---|---|
| remove | |||||
| 3,296,345 | + | +0.0 | |||
| 3,296,611 | + | ECD_03139 | 0.18 | +1.4 | |
| 3,296,632 | + | ECD_03139 | 0.20 | +0.3 | |
| 3,296,703 | + | ECD_03139 | 0.25 | +0.3 | |
| 3,296,703 | + | ECD_03139 | 0.25 | +0.2 | |
| 3,296,771 | + | ECD_03139 | 0.31 | +1.1 | |
| 3,296,774 | + | ECD_03139 | 0.31 | +0.3 | |
| 3,296,910 | + | ECD_03139 | 0.41 | -0.2 | |
| 3,297,002 | + | ECD_03139 | 0.48 | +1.0 | |
| 3,297,002 | + | ECD_03139 | 0.48 | +0.9 | |
| 3,297,002 | + | ECD_03139 | 0.48 | +0.1 | |
| 3,297,258 | + | ECD_03139 | 0.68 | +0.1 | |
| 3,297,338 | + | ECD_03139 | 0.74 | -1.0 | |
| 3,297,387 | + | ECD_03139 | 0.78 | +0.1 | |
| 3,297,490 | + | ECD_03139 | 0.86 | -0.4 | |
| 3,297,522 | + | ECD_03139 | 0.89 | +0.3 | |
| 3,297,522 | + | ECD_03139 | 0.89 | -0.5 | |
| 3,297,534 | + | ECD_03139 | 0.90 | -0.2 |
Or see this region's nucleotide sequence