Strain Fitness in Escherichia coli BL21 around ECD_03093

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
3,240,444	+		ECD_03092	0.36	+0.1
3,240,449	+		ECD_03092	0.37	-0.6
3,240,449	+		ECD_03092	0.37	-0.6
3,240,450	-		ECD_03092	0.37	-0.0
3,240,512	+		ECD_03092	0.42	-0.7
3,240,512	+		ECD_03092	0.42	-0.2
3,240,512	+		ECD_03092	0.42	-0.1
3,240,549	+		ECD_03092	0.46	-0.7
3,240,549	+		ECD_03092	0.46	+0.1
3,240,550	-		ECD_03092	0.46	-0.6
3,240,550	-		ECD_03092	0.46	+0.2
3,240,567	-		ECD_03092	0.47	-0.6
3,240,567	-		ECD_03092	0.47	-1.3
3,240,636	-		ECD_03092	0.53	-0.2
3,240,697	-		ECD_03092	0.59	-0.9
3,240,697	-		ECD_03092	0.59	+1.8
3,240,713	+		ECD_03092	0.60	+0.1
3,240,814	-		ECD_03092	0.69	-0.1
3,240,814	-		ECD_03092	0.69	-1.2
3,240,836	+		ECD_03092	0.71	-0.2
3,240,886	+		ECD_03092	0.76	-0.3
3,240,887	-		ECD_03092	0.76	-0.3
3,240,935	+		ECD_03092	0.80	-0.3
3,240,935	+		ECD_03092	0.80	-0.4
3,240,935	+		ECD_03092	0.80	+0.1
3,240,935	+		ECD_03092	0.80	-1.0
3,240,935	+		ECD_03092	0.80	-0.6
3,240,935	+		ECD_03092	0.80	-0.4
3,240,935	+		ECD_03092	0.80	+0.4
3,240,935	+		ECD_03092	0.80	-0.1
3,240,935	+		ECD_03092	0.80	+0.1
3,240,936	-		ECD_03092	0.80	+0.1
3,240,936	-		ECD_03092	0.80	-0.1
3,240,936	-		ECD_03092	0.80	+0.3
3,240,936	-		ECD_03092	0.80	+0.4
3,240,936	-		ECD_03092	0.80	+0.3
3,240,936	-		ECD_03092	0.80	+0.5
3,240,937	+		ECD_03092	0.80	-0.4
3,240,937	+		ECD_03092	0.80	-0.5
3,240,937	+		ECD_03092	0.80	-0.3
3,240,937	+		ECD_03092	0.80	+0.3
3,240,937	+		ECD_03092	0.80	-1.2
3,240,937	+		ECD_03092	0.80	-0.8
3,240,937	+		ECD_03092	0.80	+0.3
3,240,937	+		ECD_03092	0.80	+0.0
3,240,937	+		ECD_03092	0.80	+0.9
3,240,937	+		ECD_03092	0.80	-0.5
3,240,937	+		ECD_03092	0.80	-0.5
3,240,938	-		ECD_03092	0.80	-0.5
3,240,938	-		ECD_03092	0.80	-0.5
3,240,938	-		ECD_03092	0.80	-0.9
3,240,938	-		ECD_03092	0.80	-0.1
3,240,938	-		ECD_03092	0.80	+0.6
3,240,938	-		ECD_03092	0.80	-0.4
3,240,938	-		ECD_03092	0.80	+0.0
3,240,938	-		ECD_03092	0.80	-0.4
3,240,938	-		ECD_03092	0.80	+0.5
3,240,939	+		ECD_03092	0.80	-0.6
3,240,939	+		ECD_03092	0.80	+0.4
3,240,939	+		ECD_03092	0.80	-0.1
3,240,939	+		ECD_03092	0.80	-0.2
3,240,939	+		ECD_03092	0.80	+0.3
3,240,939	+		ECD_03092	0.80	-1.2
3,240,940	-		ECD_03092	0.80	-0.4
3,241,038	-		ECD_03092	0.89	+0.1
3,241,038	-		ECD_03092	0.89	-0.2
3,241,059	-				+0.1
3,241,059	-				+0.6
3,241,241	-				+0.2
3,241,279	+				+0.0
3,241,279	+				-0.6
3,241,279	+				+0.0
3,241,279	+				-0.5
3,241,280	-				-1.4
3,241,280	-				-1.0
3,241,287	+				+0.1
3,241,288	-				+0.6
3,241,288	-				+0.1
3,241,366	+				-0.3
3,241,373	+				-0.5
3,241,476	+		ECD_03093	0.31	-1.4
3,241,573	+		ECD_03093	0.55	-0.6
3,241,750	+				-0.3
3,241,805	-				-0.2
3,241,811	+				+0.3
3,241,812	-				+0.2
3,241,812	-				+0.3
3,241,890	+				+0.6
3,241,937	+				-0.4
3,241,943	+				-0.1
3,241,943	+				+0.1
3,242,206	-		ECD_03094	0.22	+0.2
3,242,238	+		ECD_03094	0.24	-0.1
3,242,260	-		ECD_03094	0.26	+0.3
3,242,471	+		ECD_03094	0.41	-0.4
3,242,472	-		ECD_03094	0.41	+0.0
3,242,561	+		ECD_03094	0.48	-0.0
3,242,561	+		ECD_03094	0.48	+0.2
3,242,580	-		ECD_03094	0.49	+0.0
3,242,652	+		ECD_03094	0.55	+0.3
3,242,653	-		ECD_03094	0.55	+0.1