Strain Fitness in Escherichia coli BL21 around ECD_03031

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
3,176,532	-				+0.4
3,176,532	-				-0.6
3,176,532	-				-0.1
3,176,541	-				-1.2
3,176,541	-				+0.1
3,176,626	-				-0.4
3,176,690	-		ECD_03030	0.17	-0.7
3,176,690	-		ECD_03030	0.17	-1.4
3,176,690	-		ECD_03030	0.17	-1.4
3,176,690	-		ECD_03030	0.17	+0.1
3,176,690	-		ECD_03030	0.17	-1.0
3,176,694	-		ECD_03030	0.18	-0.4
3,176,694	-		ECD_03030	0.18	-0.9
3,176,694	-		ECD_03030	0.18	-0.2
3,176,697	-		ECD_03030	0.18	+0.2
3,176,697	-		ECD_03030	0.18	-1.1
3,176,701	-		ECD_03030	0.18	-0.8
3,176,701	-		ECD_03030	0.18	-0.3
3,176,705	-		ECD_03030	0.19	-0.8
3,176,705	-		ECD_03030	0.19	-0.0
3,176,705	-		ECD_03030	0.19	-0.7
3,176,709	-		ECD_03030	0.19	-0.7
3,176,913	-		ECD_03030	0.42	-0.2
3,177,000	-		ECD_03030	0.52	-0.4
3,177,000	-		ECD_03030	0.52	+0.4
3,177,000	-		ECD_03030	0.52	-0.6
3,177,003	-		ECD_03030	0.52	-0.2
3,177,005	-		ECD_03030	0.53	-0.7
3,177,005	-		ECD_03030	0.53	-1.2
3,177,033	-		ECD_03030	0.56	-0.4
3,177,039	-		ECD_03030	0.56	+0.3
3,177,039	-		ECD_03030	0.56	-0.2
3,177,039	-		ECD_03030	0.56	-0.5
3,177,039	-		ECD_03030	0.56	-0.3
3,177,059	-		ECD_03030	0.59	-0.4
3,177,059	-		ECD_03030	0.59	-1.5
3,177,078	-		ECD_03030	0.61	-0.1
3,177,111	-		ECD_03030	0.65	-1.1
3,177,111	-		ECD_03030	0.65	-0.7
3,177,111	-		ECD_03030	0.65	+0.6
3,177,111	-		ECD_03030	0.65	-0.1
3,177,111	-		ECD_03030	0.65	-0.4
3,177,113	-		ECD_03030	0.65	-0.6
3,177,113	-		ECD_03030	0.65	+0.1
3,177,119	-		ECD_03030	0.66	+0.3
3,177,210	-		ECD_03030	0.76	+0.2
3,177,210	-		ECD_03030	0.76	+0.1
3,177,230	-		ECD_03030	0.78	+0.3
3,177,285	+		ECD_03030	0.84	-0.3
3,177,286	-		ECD_03030	0.84	-0.5
3,177,311	-		ECD_03030	0.87	-1.2
3,177,360	+				+0.6
3,177,361	-				+0.8
3,177,361	-				+0.1
3,177,361	-				-0.7
3,177,381	+				+0.4
3,177,381	+				+0.5
3,177,382	-				-0.6
3,177,382	-				+0.3
3,177,534	-				+0.3
3,177,534	-				+0.2
3,177,601	-				+0.1
3,177,787	-		ECD_03031	0.12	-0.9
3,177,794	+		ECD_03031	0.12	-1.5
3,177,794	+		ECD_03031	0.12	+0.9
3,177,795	-		ECD_03031	0.12	-1.0
3,177,795	-		ECD_03031	0.12	-0.9
3,177,843	+		ECD_03031	0.15	-2.4
3,177,843	+		ECD_03031	0.15	+0.4
3,177,999	+		ECD_03031	0.22	-0.6
3,178,027	-		ECD_03031	0.23	-1.5
3,178,129	-		ECD_03031	0.28	+0.4
3,178,238	-		ECD_03031	0.33	-2.5
3,178,244	+		ECD_03031	0.33	-2.1
3,178,244	+		ECD_03031	0.33	-0.8
3,178,244	+		ECD_03031	0.33	-0.8
3,178,244	+		ECD_03031	0.33	+0.2
3,178,245	-		ECD_03031	0.33	+0.9
3,178,245	-		ECD_03031	0.33	-1.7
3,178,245	-		ECD_03031	0.33	-1.6
3,178,245	-		ECD_03031	0.33	-0.4
3,178,351	-		ECD_03031	0.38	+0.3
3,178,394	-		ECD_03031	0.40	-1.5
3,178,394	-		ECD_03031	0.40	-2.5
3,178,394	-		ECD_03031	0.40	-0.8
3,178,678	-		ECD_03031	0.54	-0.5
3,178,742	-		ECD_03031	0.57	-0.3
3,179,054	-		ECD_03031	0.71	-1.8
3,179,186	+		ECD_03031	0.77	-0.2
3,179,186	+		ECD_03031	0.77	-1.3
3,179,186	+		ECD_03031	0.77	-0.9
3,179,187	-		ECD_03031	0.77	-2.8
3,179,187	-		ECD_03031	0.77	-1.9
3,179,201	+		ECD_03031	0.78	-0.4
3,179,201	+		ECD_03031	0.78	-1.3
3,179,470	-				-1.1
3,179,637	-				-1.7
3,179,646	+				-1.5
3,179,647	-				-2.2
3,179,670	+				-1.6
3,179,671	-				-2.2
3,179,671	-				-0.7
3,179,716	-				+0.2
3,179,770	-				-0.6
3,179,826	-				+1.1
3,179,835	-				+0.0
3,179,835	-				+0.7
3,179,840	-				-0.2
3,180,251	-				-0.7
3,180,292	-				-0.8
3,180,333	+				-0.3
3,180,464	-		ECD_03033	0.14	+1.6
3,180,490	-		ECD_03033	0.17	+0.7
3,180,654	+		ECD_03033	0.34	-0.4
3,180,659	-		ECD_03033	0.35	-0.5
3,180,659	-		ECD_03033	0.35	+0.1
3,180,663	-		ECD_03033	0.35	+0.6
3,180,663	-		ECD_03033	0.35	-1.3