Experiment: Mixed culture, Halobacteriovorax-10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02766 and ECD_02767 are separated by 205 nucleotides ECD_02767 and ECD_02768 are separated by 137 nucleotides
ECD_02766: ECD_02766 - Phe-Phe periplasmic metalloprotease, OM lipoprotein; low salt-inducible; Era-binding heat shock protein, at 2,912,771 to 2,913,529
_02766
ECD_02767: ECD_02767 - agmatinase, at 2,913,735 to 2,914,655
_02767
ECD_02768: ECD_02768 - biosynthetic arginine decarboxylase, PLP-binding, at 2,914,793 to 2,916,769
_02768
Position (kb)
2913
2914
2915 Strain fitness (log2 ratio)
-2
-1
0
1 at 2912.743 kb on - strand at 2912.787 kb on + strand at 2912.787 kb on + strand at 2912.833 kb on + strand at 2912.975 kb on + strand, within ECD_02766 at 2912.995 kb on + strand, within ECD_02766 at 2912.995 kb on + strand, within ECD_02766 at 2912.995 kb on + strand, within ECD_02766 at 2912.995 kb on + strand, within ECD_02766 at 2912.996 kb on - strand, within ECD_02766 at 2913.009 kb on + strand, within ECD_02766 at 2913.020 kb on - strand, within ECD_02766 at 2913.020 kb on - strand, within ECD_02766 at 2913.042 kb on - strand, within ECD_02766 at 2913.050 kb on + strand, within ECD_02766 at 2913.050 kb on + strand, within ECD_02766 at 2913.050 kb on + strand, within ECD_02766 at 2913.050 kb on + strand, within ECD_02766 at 2913.050 kb on + strand, within ECD_02766 at 2913.050 kb on + strand, within ECD_02766 at 2913.050 kb on + strand, within ECD_02766 at 2913.050 kb on + strand, within ECD_02766 at 2913.050 kb on + strand, within ECD_02766 at 2913.050 kb on + strand, within ECD_02766 at 2913.051 kb on - strand, within ECD_02766 at 2913.051 kb on - strand, within ECD_02766 at 2913.051 kb on - strand, within ECD_02766 at 2913.051 kb on - strand, within ECD_02766 at 2913.051 kb on - strand, within ECD_02766 at 2913.051 kb on - strand, within ECD_02766 at 2913.051 kb on - strand, within ECD_02766 at 2913.121 kb on + strand, within ECD_02766 at 2913.122 kb on - strand, within ECD_02766 at 2913.217 kb on + strand, within ECD_02766 at 2913.217 kb on + strand, within ECD_02766 at 2913.218 kb on - strand, within ECD_02766 at 2913.234 kb on + strand, within ECD_02766 at 2913.271 kb on - strand, within ECD_02766 at 2913.359 kb on + strand, within ECD_02766 at 2913.523 kb on + strand at 2913.523 kb on + strand at 2913.523 kb on + strand at 2913.524 kb on - strand at 2913.524 kb on - strand at 2913.524 kb on - strand at 2913.524 kb on - strand at 2913.527 kb on + strand at 2913.527 kb on + strand at 2913.528 kb on - strand at 2913.528 kb on - strand at 2913.549 kb on + strand at 2913.550 kb on - strand at 2913.558 kb on + strand at 2913.599 kb on + strand at 2913.647 kb on + strand at 2913.663 kb on - strand at 2913.737 kb on - strand at 2913.761 kb on + strand at 2913.762 kb on - strand at 2913.763 kb on + strand at 2913.764 kb on - strand at 2913.764 kb on - strand at 2913.764 kb on - strand at 2913.888 kb on - strand, within ECD_02767 at 2913.888 kb on - strand, within ECD_02767 at 2913.891 kb on - strand, within ECD_02767 at 2913.989 kb on + strand, within ECD_02767 at 2914.083 kb on - strand, within ECD_02767 at 2914.100 kb on + strand, within ECD_02767 at 2914.100 kb on + strand, within ECD_02767 at 2914.101 kb on - strand, within ECD_02767 at 2914.101 kb on - strand, within ECD_02767 at 2914.154 kb on - strand, within ECD_02767 at 2914.160 kb on + strand, within ECD_02767 at 2914.161 kb on - strand, within ECD_02767 at 2914.193 kb on - strand, within ECD_02767 at 2914.193 kb on - strand, within ECD_02767 at 2914.196 kb on + strand, within ECD_02767 at 2914.218 kb on + strand, within ECD_02767 at 2914.219 kb on - strand, within ECD_02767 at 2914.271 kb on + strand, within ECD_02767 at 2914.301 kb on + strand, within ECD_02767 at 2914.301 kb on + strand, within ECD_02767 at 2914.301 kb on + strand, within ECD_02767 at 2914.301 kb on + strand, within ECD_02767 at 2914.302 kb on - strand, within ECD_02767 at 2914.302 kb on - strand, within ECD_02767 at 2914.302 kb on - strand, within ECD_02767 at 2914.302 kb on - strand, within ECD_02767 at 2914.381 kb on - strand, within ECD_02767 at 2914.381 kb on - strand, within ECD_02767 at 2914.381 kb on - strand, within ECD_02767 at 2914.381 kb on - strand, within ECD_02767 at 2914.381 kb on - strand, within ECD_02767 at 2914.571 kb on - strand at 2914.628 kb on + strand at 2914.645 kb on - strand at 2914.645 kb on - strand at 2914.668 kb on - strand at 2914.668 kb on - strand at 2914.671 kb on - strand at 2914.671 kb on - strand at 2914.681 kb on + strand at 2914.684 kb on - strand at 2914.740 kb on - strand at 2914.754 kb on + strand at 2914.769 kb on - strand at 2914.794 kb on + strand at 2914.794 kb on + strand at 2914.795 kb on - strand at 2914.795 kb on - strand at 2914.795 kb on - strand at 2914.795 kb on - strand at 2914.795 kb on - strand at 2914.795 kb on - strand at 2914.809 kb on + strand at 2914.810 kb on - strand at 2914.810 kb on - strand at 2914.813 kb on + strand at 2914.814 kb on - strand at 2914.814 kb on - strand at 2914.814 kb on - strand at 2914.814 kb on - strand at 2914.814 kb on - strand at 2914.814 kb on - strand at 2914.814 kb on - strand at 2914.814 kb on - strand at 2914.816 kb on - strand at 2914.821 kb on + strand at 2914.932 kb on - strand at 2914.932 kb on - strand at 2914.932 kb on - strand at 2914.932 kb on - strand at 2914.932 kb on - strand at 2914.932 kb on - strand at 2914.932 kb on - strand at 2914.935 kb on + strand at 2914.935 kb on + strand at 2914.936 kb on - strand at 2914.936 kb on - strand at 2914.936 kb on - strand at 2914.936 kb on - strand at 2914.936 kb on - strand at 2914.936 kb on - strand at 2914.936 kb on - strand at 2914.936 kb on - strand at 2914.936 kb on - strand at 2914.936 kb on - strand at 2914.936 kb on - strand at 2914.936 kb on - strand at 2914.936 kb on - strand at 2914.979 kb on + strand at 2914.980 kb on - strand at 2914.980 kb on - strand at 2914.986 kb on - strand at 2914.986 kb on - strand at 2914.986 kb on - strand at 2914.986 kb on - strand at 2914.986 kb on - strand at 2914.991 kb on - strand, within ECD_02768 at 2915.081 kb on - strand, within ECD_02768 at 2915.159 kb on - strand, within ECD_02768 at 2915.159 kb on - strand, within ECD_02768 at 2915.159 kb on - strand, within ECD_02768 at 2915.159 kb on - strand, within ECD_02768 at 2915.159 kb on - strand, within ECD_02768 at 2915.159 kb on - strand, within ECD_02768 at 2915.159 kb on - strand, within ECD_02768 at 2915.161 kb on - strand, within ECD_02768 at 2915.161 kb on - strand, within ECD_02768 at 2915.161 kb on - strand, within ECD_02768 at 2915.161 kb on - strand, within ECD_02768 at 2915.161 kb on - strand, within ECD_02768 at 2915.192 kb on - strand, within ECD_02768 at 2915.192 kb on - strand, within ECD_02768 at 2915.192 kb on - strand, within ECD_02768 at 2915.192 kb on - strand, within ECD_02768 at 2915.314 kb on - strand, within ECD_02768 at 2915.329 kb on + strand, within ECD_02768 at 2915.330 kb on - strand, within ECD_02768 at 2915.330 kb on - strand, within ECD_02768 at 2915.330 kb on - strand, within ECD_02768 at 2915.330 kb on - strand, within ECD_02768 at 2915.416 kb on - strand, within ECD_02768 at 2915.450 kb on - strand, within ECD_02768 at 2915.619 kb on + strand, within ECD_02768 at 2915.620 kb on - strand, within ECD_02768 at 2915.620 kb on - strand, within ECD_02768 at 2915.645 kb on - strand, within ECD_02768 at 2915.645 kb on - strand, within ECD_02768 at 2915.645 kb on - strand, within ECD_02768 at 2915.648 kb on - strand, within ECD_02768 at 2915.648 kb on - strand, within ECD_02768
Per-strain Table
Position Strand Gene LocusTag Fraction Mixed culture, Halobacteriovorax-10 remove 2,912,743 - -0.1 2,912,787 + -0.4 2,912,787 + -0.5 2,912,833 + -0.6 2,912,975 + ECD_02766 0.27 +0.2 2,912,995 + ECD_02766 0.30 +0.5 2,912,995 + ECD_02766 0.30 +0.7 2,912,995 + ECD_02766 0.30 -0.2 2,912,995 + ECD_02766 0.30 +0.0 2,912,996 - ECD_02766 0.30 +0.1 2,913,009 + ECD_02766 0.31 +0.4 2,913,020 - ECD_02766 0.33 +0.4 2,913,020 - ECD_02766 0.33 -0.2 2,913,042 - ECD_02766 0.36 -0.1 2,913,050 + ECD_02766 0.37 +0.9 2,913,050 + ECD_02766 0.37 +0.4 2,913,050 + ECD_02766 0.37 +0.1 2,913,050 + ECD_02766 0.37 +0.8 2,913,050 + ECD_02766 0.37 -0.2 2,913,050 + ECD_02766 0.37 -0.2 2,913,050 + ECD_02766 0.37 +0.0 2,913,050 + ECD_02766 0.37 -0.5 2,913,050 + ECD_02766 0.37 +0.2 2,913,050 + ECD_02766 0.37 +0.9 2,913,051 - ECD_02766 0.37 -0.7 2,913,051 - ECD_02766 0.37 +0.1 2,913,051 - ECD_02766 0.37 -0.4 2,913,051 - ECD_02766 0.37 -0.0 2,913,051 - ECD_02766 0.37 +0.5 2,913,051 - ECD_02766 0.37 -0.3 2,913,051 - ECD_02766 0.37 -0.1 2,913,121 + ECD_02766 0.46 -0.0 2,913,122 - ECD_02766 0.46 -0.3 2,913,217 + ECD_02766 0.59 -0.5 2,913,217 + ECD_02766 0.59 -0.2 2,913,218 - ECD_02766 0.59 +0.5 2,913,234 + ECD_02766 0.61 -0.0 2,913,271 - ECD_02766 0.66 -0.3 2,913,359 + ECD_02766 0.77 -1.2 2,913,523 + -0.0 2,913,523 + +0.0 2,913,523 + -0.1 2,913,524 - -0.1 2,913,524 - -0.3 2,913,524 - -0.9 2,913,524 - -0.5 2,913,527 + +0.1 2,913,527 + -0.1 2,913,528 - +0.1 2,913,528 - -0.4 2,913,549 + +0.1 2,913,550 - +1.1 2,913,558 + -1.0 2,913,599 + -0.5 2,913,647 + -0.3 2,913,663 - +0.5 2,913,737 - -0.7 2,913,761 + +1.2 2,913,762 - +0.7 2,913,763 + -0.1 2,913,764 - -0.1 2,913,764 - +0.2 2,913,764 - -0.4 2,913,888 - ECD_02767 0.17 +0.6 2,913,888 - ECD_02767 0.17 +0.5 2,913,891 - ECD_02767 0.17 -0.0 2,913,989 + ECD_02767 0.28 -1.4 2,914,083 - ECD_02767 0.38 +1.4 2,914,100 + ECD_02767 0.40 +0.1 2,914,100 + ECD_02767 0.40 +0.7 2,914,101 - ECD_02767 0.40 -0.9 2,914,101 - ECD_02767 0.40 -0.2 2,914,154 - ECD_02767 0.45 -0.4 2,914,160 + ECD_02767 0.46 +0.2 2,914,161 - ECD_02767 0.46 -0.1 2,914,193 - ECD_02767 0.50 -0.7 2,914,193 - ECD_02767 0.50 +0.7 2,914,196 + ECD_02767 0.50 -0.1 2,914,218 + ECD_02767 0.52 -0.0 2,914,219 - ECD_02767 0.53 -0.9 2,914,271 + ECD_02767 0.58 -1.8 2,914,301 + ECD_02767 0.61 -0.3 2,914,301 + ECD_02767 0.61 -0.8 2,914,301 + ECD_02767 0.61 +0.7 2,914,301 + ECD_02767 0.61 +0.3 2,914,302 - ECD_02767 0.62 +0.0 2,914,302 - ECD_02767 0.62 -0.1 2,914,302 - ECD_02767 0.62 +0.4 2,914,302 - ECD_02767 0.62 -1.1 2,914,381 - ECD_02767 0.70 +1.4 2,914,381 - ECD_02767 0.70 -0.4 2,914,381 - ECD_02767 0.70 +0.4 2,914,381 - ECD_02767 0.70 -0.2 2,914,381 - ECD_02767 0.70 -0.1 2,914,571 - -0.8 2,914,628 + -0.0 2,914,645 - -0.3 2,914,645 - -0.5 2,914,668 - -0.5 2,914,668 - +0.7 2,914,671 - -0.4 2,914,671 - -0.1 2,914,681 + -0.4 2,914,684 - +0.1 2,914,740 - +0.1 2,914,754 + -1.0 2,914,769 - +0.7 2,914,794 + +0.3 2,914,794 + +0.9 2,914,795 - +0.5 2,914,795 - -0.1 2,914,795 - +0.0 2,914,795 - -0.1 2,914,795 - +0.1 2,914,795 - +0.5 2,914,809 + -0.3 2,914,810 - +0.5 2,914,810 - +0.0 2,914,813 + +0.2 2,914,814 - -0.3 2,914,814 - -0.3 2,914,814 - +0.2 2,914,814 - -0.1 2,914,814 - +0.3 2,914,814 - +0.9 2,914,814 - -0.1 2,914,814 - +1.2 2,914,816 - +0.3 2,914,821 + -0.0 2,914,932 - +0.1 2,914,932 - +0.4 2,914,932 - +0.3 2,914,932 - -1.3 2,914,932 - +0.2 2,914,932 - -0.2 2,914,932 - -0.3 2,914,935 + +0.5 2,914,935 + +0.1 2,914,936 - +1.0 2,914,936 - +0.3 2,914,936 - -0.1 2,914,936 - -0.6 2,914,936 - -0.7 2,914,936 - +0.4 2,914,936 - +0.7 2,914,936 - +0.8 2,914,936 - -0.4 2,914,936 - -0.4 2,914,936 - +0.3 2,914,936 - -0.2 2,914,936 - -0.1 2,914,979 + +0.7 2,914,980 - -0.5 2,914,980 - -0.2 2,914,986 - -0.1 2,914,986 - -1.4 2,914,986 - -0.1 2,914,986 - -0.2 2,914,986 - -0.1 2,914,991 - ECD_02768 0.10 -0.3 2,915,081 - ECD_02768 0.15 -0.1 2,915,159 - ECD_02768 0.19 +0.4 2,915,159 - ECD_02768 0.19 +0.4 2,915,159 - ECD_02768 0.19 -0.1 2,915,159 - ECD_02768 0.19 -0.2 2,915,159 - ECD_02768 0.19 -0.5 2,915,159 - ECD_02768 0.19 -1.2 2,915,159 - ECD_02768 0.19 -1.5 2,915,161 - ECD_02768 0.19 -0.7 2,915,161 - ECD_02768 0.19 +0.1 2,915,161 - ECD_02768 0.19 -0.3 2,915,161 - ECD_02768 0.19 +0.9 2,915,161 - ECD_02768 0.19 -0.1 2,915,192 - ECD_02768 0.20 -0.2 2,915,192 - ECD_02768 0.20 +0.6 2,915,192 - ECD_02768 0.20 +0.7 2,915,192 - ECD_02768 0.20 +0.0 2,915,314 - ECD_02768 0.26 -2.0 2,915,329 + ECD_02768 0.27 +1.4 2,915,330 - ECD_02768 0.27 -0.6 2,915,330 - ECD_02768 0.27 -0.0 2,915,330 - ECD_02768 0.27 -0.6 2,915,330 - ECD_02768 0.27 +0.7 2,915,416 - ECD_02768 0.32 -1.2 2,915,450 - ECD_02768 0.33 -0.4 2,915,619 + ECD_02768 0.42 +0.6 2,915,620 - ECD_02768 0.42 +0.3 2,915,620 - ECD_02768 0.42 -0.8 2,915,645 - ECD_02768 0.43 -0.6 2,915,645 - ECD_02768 0.43 -0.1 2,915,645 - ECD_02768 0.43 -0.9 2,915,648 - ECD_02768 0.43 +0.5 2,915,648 - ECD_02768 0.43 -0.5
Or see this region's nucleotide sequence