Strain Fitness in Escherichia coli BL21 around ECD_02629

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
2,743,011	-		ECD_02626	0.67	-0.6
2,743,013	+		ECD_02626	0.67	+0.2
2,743,014	-		ECD_02626	0.67	-0.1
2,743,014	-		ECD_02626	0.67	+0.4
2,743,025	+		ECD_02626	0.68	+0.3
2,743,026	-		ECD_02626	0.69	+1.1
2,743,026	-		ECD_02626	0.69	-0.7
2,743,026	-		ECD_02626	0.69	+0.4
2,743,031	+		ECD_02626	0.69	-0.0
2,743,087	-		ECD_02626	0.76	+0.4
2,743,154	-		ECD_02626	0.85	-0.1
2,743,171	+		ECD_02626	0.87	-0.5
2,743,244	+				+0.3
2,743,244	+				-0.0
2,743,244	+				+0.5
2,743,244	+				+0.2
2,743,245	-				-0.1
2,743,245	-				-0.2
2,743,245	-				+0.5
2,743,245	-				+0.2
2,743,247	+				+0.1
2,743,248	-				+0.2
2,743,248	-				+1.2
2,743,248	-				+0.1
2,743,248	-				-0.5
2,743,327	-				-0.2
2,743,337	+				-0.3
2,743,340	+				+0.0
2,743,341	-				+0.9
2,743,358	-				+0.5
2,743,384	+		ECD_02627	0.12	+1.2
2,743,384	+		ECD_02627	0.12	-0.2
2,743,385	-		ECD_02627	0.12	+0.0
2,743,466	-		ECD_02627	0.36	-0.4
2,743,490	-		ECD_02627	0.43	+0.5
2,743,508	+		ECD_02627	0.49	+0.9
2,743,528	-		ECD_02627	0.54	-1.2
2,743,548	+		ECD_02627	0.60	-1.0
2,743,548	+		ECD_02627	0.60	-0.3
2,743,549	-		ECD_02627	0.61	-0.4
2,743,549	-		ECD_02627	0.61	+0.9
2,743,549	-		ECD_02627	0.61	+0.0
2,743,549	-		ECD_02627	0.61	-0.3
2,743,549	-		ECD_02627	0.61	+0.3
2,743,549	-		ECD_02627	0.61	-0.0
2,743,549	-		ECD_02627	0.61	-0.4
2,743,549	-		ECD_02627	0.61	+0.2
2,743,549	-		ECD_02627	0.61	-0.6
2,743,565	+		ECD_02627	0.65	-0.4
2,743,565	+		ECD_02627	0.65	+1.2
2,743,566	-		ECD_02627	0.66	+0.5
2,743,566	-		ECD_02627	0.66	-1.2
2,743,566	-		ECD_02627	0.66	+0.0
2,743,668	-				-0.6
2,743,676	-				-0.1
2,743,676	-				-0.6
2,743,676	-				-0.4
2,743,695	-				+0.3
2,743,695	-				+0.0
2,743,695	-				+0.4
2,743,804	-		ECD_02628	0.50	-0.3
2,743,845	-		ECD_02628	0.66	-0.6
2,743,845	-		ECD_02628	0.66	-0.2
2,743,867	-		ECD_02628	0.75	+0.4
2,743,929	-				-0.5
2,743,929	-				+0.1
2,743,954	-				-0.1
2,743,961	+				+0.7
2,743,962	-				+0.2
2,743,962	-				+0.3
2,743,962	-				-0.1
2,743,967	-				+0.2
2,744,007	+				+0.1
2,744,008	-				+0.9
2,744,092	-				-1.5
2,744,092	-				-0.5
2,744,092	-				-1.5
2,744,201	+				-1.3
2,744,201	+				-0.2
2,744,202	-				-0.3
2,744,202	-				-1.5
2,744,202	-				-0.9
2,744,202	-				-1.5
2,744,202	-				-1.0
2,744,202	-				-1.2
2,744,213	-				-1.2
2,744,221	+				-3.5
2,744,222	-				-0.4
2,744,222	-				-0.6
2,744,225	+				-2.2
2,744,226	-				-0.9
2,744,226	-				+0.7
2,744,260	-		ECD_02629	0.11	-0.1
2,744,260	-		ECD_02629	0.11	-0.6
2,744,462	-		ECD_02629	0.20	-1.1
2,744,545	+		ECD_02629	0.24	-1.7
2,744,546	-		ECD_02629	0.24	-1.4
2,744,851	+		ECD_02629	0.38	-0.1
2,745,014	-		ECD_02629	0.45	-2.1
2,745,021	+		ECD_02629	0.45	-1.2
2,745,021	+		ECD_02629	0.45	-1.2
2,745,022	-		ECD_02629	0.45	-1.2
2,745,022	-		ECD_02629	0.45	-3.3
2,745,046	+		ECD_02629	0.47	-1.2
2,745,050	+		ECD_02629	0.47	-0.6
2,745,051	-		ECD_02629	0.47	-1.3
2,745,169	+		ECD_02629	0.52	-1.0
2,745,169	+		ECD_02629	0.52	-2.7
2,745,169	+		ECD_02629	0.52	+0.4
2,745,170	-		ECD_02629	0.52	-2.0
2,745,171	+		ECD_02629	0.52	-3.0
2,745,172	-		ECD_02629	0.52	-1.6
2,745,272	-		ECD_02629	0.57	-1.4
2,745,277	+		ECD_02629	0.57	-0.5
2,745,277	+		ECD_02629	0.57	-2.3
2,745,278	-		ECD_02629	0.57	-1.3
2,745,278	-		ECD_02629	0.57	-1.2
2,745,278	-		ECD_02629	0.57	-2.4
2,745,278	-		ECD_02629	0.57	-2.0
2,745,312	+		ECD_02629	0.58	-1.8
2,745,313	-		ECD_02629	0.58	-0.9
2,745,356	+		ECD_02629	0.60	-2.1
2,745,373	-		ECD_02629	0.61	-1.9
2,745,400	+		ECD_02629	0.62	-3.1
2,745,400	+		ECD_02629	0.62	-2.1
2,745,400	+		ECD_02629	0.62	-2.4
2,745,400	+		ECD_02629	0.62	-3.6
2,745,400	+		ECD_02629	0.62	-1.5
2,745,400	+		ECD_02629	0.62	-1.4
2,745,401	-		ECD_02629	0.62	-1.4
2,745,401	-		ECD_02629	0.62	-2.1
2,745,401	-		ECD_02629	0.62	-1.9
2,745,401	-		ECD_02629	0.62	-1.6
2,745,401	-		ECD_02629	0.62	-2.2
2,745,401	-		ECD_02629	0.62	-1.6
2,745,405	-		ECD_02629	0.63	-1.8
2,745,457	+		ECD_02629	0.65	-0.6
2,745,458	-		ECD_02629	0.65	-2.3
2,745,472	-		ECD_02629	0.66	-1.5
2,745,472	-		ECD_02629	0.66	-1.2
2,745,472	-		ECD_02629	0.66	-1.3
2,745,472	-		ECD_02629	0.66	-1.7
2,745,472	-		ECD_02629	0.66	-1.6
2,745,472	-		ECD_02629	0.66	-1.3
2,745,472	-		ECD_02629	0.66	-2.7
2,745,472	-		ECD_02629	0.66	-2.4
2,745,492	+		ECD_02629	0.66	-2.7
2,745,492	+		ECD_02629	0.66	-1.3
2,745,492	+		ECD_02629	0.66	-1.0
2,745,492	+		ECD_02629	0.66	-0.6
2,745,492	+		ECD_02629	0.66	-4.0
2,745,493	-		ECD_02629	0.67	-1.4
2,745,493	-		ECD_02629	0.67	-0.8
2,745,493	-		ECD_02629	0.67	-1.5
2,745,493	-		ECD_02629	0.67	-1.5
2,745,493	-		ECD_02629	0.67	-0.9
2,745,493	-		ECD_02629	0.67	+0.4
2,745,493	-		ECD_02629	0.67	-3.4
2,745,493	-		ECD_02629	0.67	-2.2
2,745,558	+		ECD_02629	0.69	-2.5
2,745,558	+		ECD_02629	0.69	-1.1
2,745,558	+		ECD_02629	0.69	-2.0
2,745,559	-		ECD_02629	0.69	-2.1
2,745,559	-		ECD_02629	0.69	-1.9
2,745,559	-		ECD_02629	0.69	-1.2
2,745,559	-		ECD_02629	0.69	-2.0
2,745,559	-		ECD_02629	0.69	-2.0
2,745,559	-		ECD_02629	0.69	-2.6
2,745,559	-		ECD_02629	0.69	-1.2
2,745,559	-		ECD_02629	0.69	-1.3
2,745,696	+		ECD_02629	0.76	-2.5
2,745,696	+		ECD_02629	0.76	-1.1
2,745,697	-		ECD_02629	0.76	-2.8
2,745,697	-		ECD_02629	0.76	-0.9
2,745,701	-		ECD_02629	0.76	-2.7
2,745,753	-		ECD_02629	0.78	-2.3
2,745,753	-		ECD_02629	0.78	-2.1
2,745,772	+		ECD_02629	0.79	-2.3
2,745,773	-		ECD_02629	0.79	-1.3
2,745,773	-		ECD_02629	0.79	-2.2
2,745,795	-		ECD_02629	0.80	-1.4
2,745,795	-		ECD_02629	0.80	-2.4
2,745,923	-		ECD_02629	0.86	-2.3
2,745,974	+		ECD_02629	0.88	-1.3
2,745,975	-		ECD_02629	0.88	-4.0
2,745,975	-		ECD_02629	0.88	-2.2
2,745,975	-		ECD_02629	0.88	-0.8
2,746,030	+				-3.0
2,746,031	-				-1.4
2,746,031	-				-1.7
2,746,031	-				-1.6
2,746,031	-				-0.7
2,746,031	-				-1.6
2,746,031	-				-1.1
2,746,034	+				-1.2
2,746,035	-				-1.5
2,746,035	-				-1.4
2,746,035	-				-2.4
2,746,035	-				-2.3
2,746,035	-				-2.2
2,746,076	+				-1.3
2,746,076	+				-1.2
2,746,120	-				-2.6
2,746,120	-				-0.7
2,746,120	-				-1.0
2,746,120	-				-1.6
2,746,163	-				-1.9
2,746,163	-				-1.7
2,746,163	-				-1.8
2,746,210	+				+0.5
2,746,216	+				-0.6
2,746,216	+				-1.5
2,746,216	+				-1.0
2,746,217	-				-1.9
2,746,217	-				-3.3
2,746,217	-				-1.8
2,746,217	-				-1.6
2,746,217	-				-2.9
2,746,217	-				-2.2
2,746,217	-				-1.9
2,746,217	-				-0.4
2,746,217	-				-2.0
2,746,217	-				-3.2
2,746,217	-				-2.5
2,746,217	-				-1.7
2,746,217	-				-1.2
2,746,217	-				-1.6
2,746,217	-				-2.1
2,746,290	-				-0.4
2,746,290	-				+0.3
2,746,293	+				-0.3
2,746,294	-				+0.2
2,746,294	-				-0.0
2,746,310	-				-0.0
2,746,344	+				+0.1
2,746,345	-				+0.5
2,746,345	-				+0.3
2,746,345	-				+0.2
2,746,371	+				-0.1
2,746,371	+				+0.4
2,746,371	+				-0.8
2,746,371	+				-0.1
2,746,371	+				-0.7
2,746,372	-				+0.6
2,746,372	-				-0.1
2,746,372	-				+0.5
2,746,372	-				+0.1
2,746,372	-				+0.4
2,746,372	-				-0.5
2,746,372	-				+0.3
2,746,372	-				+0.3
2,746,372	-				-0.0
2,746,372	-				-0.1
2,746,372	-				-0.0
2,746,373	+				-0.0
2,746,373	+				-1.1
2,746,374	-				+0.1
2,746,430	-		ECD_02630	0.11	+0.2
2,746,430	-		ECD_02630	0.11	-0.8
2,746,430	-		ECD_02630	0.11	-0.3
2,746,430	-		ECD_02630	0.11	+0.2
2,746,433	+		ECD_02630	0.11	+0.0
2,746,433	+		ECD_02630	0.11	+0.2
2,746,433	+		ECD_02630	0.11	+0.4
2,746,433	+		ECD_02630	0.11	-0.0
2,746,433	+		ECD_02630	0.11	+0.2
2,746,434	-		ECD_02630	0.11	+0.4
2,746,434	-		ECD_02630	0.11	+0.2
2,746,434	-		ECD_02630	0.11	-0.6
2,746,434	-		ECD_02630	0.11	-0.7
2,746,434	-		ECD_02630	0.11	+0.4
2,746,438	+		ECD_02630	0.12	+0.1
2,746,438	+		ECD_02630	0.12	+0.6
2,746,439	-		ECD_02630	0.12	+0.1
2,746,439	-		ECD_02630	0.12	-0.3
2,746,439	-		ECD_02630	0.12	-0.2
2,746,439	-		ECD_02630	0.12	+0.1
2,746,439	-		ECD_02630	0.12	+0.6
2,746,446	+		ECD_02630	0.12	-0.3
2,746,446	+		ECD_02630	0.12	+0.2
2,746,446	+		ECD_02630	0.12	+0.3
2,746,447	-		ECD_02630	0.12	+0.1
2,746,461	+		ECD_02630	0.13	+0.2
2,746,462	-		ECD_02630	0.13	-0.5
2,746,473	+		ECD_02630	0.14	+0.6
2,746,574	+		ECD_02630	0.22	-0.6
2,746,648	+		ECD_02630	0.28	-0.2
2,746,648	+		ECD_02630	0.28	-0.0
2,746,648	+		ECD_02630	0.28	+0.3
2,746,649	-		ECD_02630	0.28	-1.0
2,746,649	-		ECD_02630	0.28	-0.7
2,746,689	+		ECD_02630	0.31	+0.8
2,746,690	-		ECD_02630	0.31	-0.6
2,746,690	-		ECD_02630	0.31	+0.1
2,746,690	-		ECD_02630	0.31	-0.4
2,746,690	-		ECD_02630	0.31	-1.2
2,746,690	-		ECD_02630	0.31	+0.7
2,746,822	+		ECD_02630	0.41	+0.5
2,746,822	+		ECD_02630	0.41	+0.4
2,746,899	-		ECD_02630	0.47	-1.0
2,747,006	-		ECD_02630	0.55	+0.3
2,747,006	-		ECD_02630	0.55	-1.0
2,747,034	+		ECD_02630	0.57	+0.6
2,747,034	+		ECD_02630	0.57	-0.2
2,747,034	+		ECD_02630	0.57	+0.2
2,747,034	+		ECD_02630	0.57	+0.1
2,747,035	-		ECD_02630	0.57	+0.2
2,747,035	-		ECD_02630	0.57	+0.4
2,747,035	-		ECD_02630	0.57	-0.6
2,747,035	-		ECD_02630	0.57	-0.4
2,747,035	-		ECD_02630	0.57	-0.1
2,747,035	-		ECD_02630	0.57	+0.5
2,747,041	+		ECD_02630	0.58	+0.1
2,747,041	+		ECD_02630	0.58	+1.1
2,747,041	+		ECD_02630	0.58	-0.8
2,747,041	+		ECD_02630	0.58	-0.3
2,747,041	+		ECD_02630	0.58	-0.2
2,747,041	+		ECD_02630	0.58	-0.1
2,747,042	-		ECD_02630	0.58	-0.2
2,747,042	-		ECD_02630	0.58	+0.4
2,747,042	-		ECD_02630	0.58	-0.0
2,747,042	-		ECD_02630	0.58	-0.1
2,747,042	-		ECD_02630	0.58	+0.2
2,747,042	-		ECD_02630	0.58	+0.4
2,747,042	-		ECD_02630	0.58	+0.2
2,747,176	+		ECD_02630	0.68	-0.4
2,747,176	+		ECD_02630	0.68	+0.0
2,747,180	+		ECD_02630	0.69	+0.1
2,747,181	-		ECD_02630	0.69	-0.7
2,747,181	-		ECD_02630	0.69	-0.1
2,747,181	-		ECD_02630	0.69	+0.0
2,747,181	-		ECD_02630	0.69	-0.2
2,747,191	+		ECD_02630	0.69	+0.9